| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523595
Identifier: 222523595
GI number: 222523595
Start: 365443
End: 366576
Strand: Reverse
Name: 222523595
Synonym: Chy400_0301
Alternate gene names: NA
Gene position: 366576-365443 (Counterclockwise)
Preceding gene: 222523596
Following gene: 222523591
Centisome position: 6.96
GC content: 56.17
Gene sequence:
>1134_bases TTGAATTGTAAGGCGTTGATTTTTCTCGTTCCGCATCCAAACACGCCGATTGTGACGTTCGACAGTATTGCTGCTTTATG GGCTAAGACTGATGTGACCGGTCAAATGCTCTTGCTGATTGCCCTGGCCGGTGTGGCCATCTTTGCCATCCGTCATCTCC AGTCACTCATCTGGAATCTGAGCGAATTTAGCCGGTTCCGCCGCAGCAGTGCTTATCTCCAGCTTCGTGAAACGAACGGT GCGGTGATGTTGATGGCACTGCCCTTGACCCTGGCGATGACGATTAATGTGGCATTTGTGAGCGGTGCAGTCTTCGTGCC CGGTTTGTGGAACGTGGTCGAATATCTGTTCCCCTTCGCAATGACAGCGTTTCTCCTCGTTGGTGTGCTGGCACTGCGCA CGTTTGCAGATATTTTCGGGCGGGCACTGGCGAACGGTCATTTCGATTGCACGCGCAACAATAACCTGACGCAGTTGTTG GCTGCGTTTGCCTTCGCGATGGTCGGGGTAGGAATGGCTGCACCGGCAGCGATGAGCACGGTCAAACTGACGATTGGTCT ATCGATGTTGGGGACAATTTTCTTCATTACTGCGGCAGTCGTCATCGCTTTGATCCTGCTGGTGTTGGGAGCACGGGCGA TGTTGACGAATGGGTTGGCCGTGGAGGCTGGCCCCAGCCTCTGGATGCCGATCCCGTTGTTGACGCTGATCGGTATCGCT ATGCTGCGTATCAGCCATGGTCTGCACAGTGGCTTTGAACTGCATATCGAAGCCCCGCACCGGTTACTGATCACTGCGGT GTTCTTCAGTCTCCAACTGCTGGCAGGTTTGTTGGGGCTATCGGTGCTGCGACGGGTAGGTTATTTCCGAACGTATCTGA ACGGGCCGGCGCGCAGTCCTGGTGCGTATGGCCTGATCTGTCCGGCAGTGGGACTGTTCGTGTTCGGCATGTTTTTCCTG CACGTCGGTCTGGTGCAAAACGGTCTGATCGAGAAGTTCTCGCCGGTCTATTTCGTTGCCCTGGCGGCGCTGGCAGTGGT ACAGGTGCTTGGGATCATCACGATGTTCCGGCTTGATCGCCGGTTGCTCGCGCAGCCGGCGCGATCACCGGCTGAAGCCG AGAGGGTGGCCTGA
Upstream 100 bases:
>100_bases CCGCGCCGAATAGCGCGGGTTTGTTGCGTCATGTTGCGGATTTTGTGGAACGGTTAGGCCGCGTAGCGCAAGGTGGCGGT GAGGGTAAGGGCAATCGTTT
Downstream 100 bases:
>100_bases GAGCCATAACCAAAAGGGGGCGGAACCATCCGCCCCCTTCGTCATTCGTTCGTCACTTACAACTCTACACTAAACGCAGC CTGAATACCTGGAATCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MNCKALIFLVPHPNTPIVTFDSIAALWAKTDVTGQMLLLIALAGVAIFAIRHLQSLIWNLSEFSRFRRSSAYLQLRETNG AVMLMALPLTLAMTINVAFVSGAVFVPGLWNVVEYLFPFAMTAFLLVGVLALRTFADIFGRALANGHFDCTRNNNLTQLL AAFAFAMVGVGMAAPAAMSTVKLTIGLSMLGTIFFITAAVVIALILLVLGARAMLTNGLAVEAGPSLWMPIPLLTLIGIA MLRISHGLHSGFELHIEAPHRLLITAVFFSLQLLAGLLGLSVLRRVGYFRTYLNGPARSPGAYGLICPAVGLFVFGMFFL HVGLVQNGLIEKFSPVYFVALAALAVVQVLGIITMFRLDRRLLAQPARSPAEAERVA
Sequences:
>Translated_377_residues MNCKALIFLVPHPNTPIVTFDSIAALWAKTDVTGQMLLLIALAGVAIFAIRHLQSLIWNLSEFSRFRRSSAYLQLRETNG AVMLMALPLTLAMTINVAFVSGAVFVPGLWNVVEYLFPFAMTAFLLVGVLALRTFADIFGRALANGHFDCTRNNNLTQLL AAFAFAMVGVGMAAPAAMSTVKLTIGLSMLGTIFFITAAVVIALILLVLGARAMLTNGLAVEAGPSLWMPIPLLTLIGIA MLRISHGLHSGFELHIEAPHRLLITAVFFSLQLLAGLLGLSVLRRVGYFRTYLNGPARSPGAYGLICPAVGLFVFGMFFL HVGLVQNGLIEKFSPVYFVALAALAVVQVLGIITMFRLDRRLLAQPARSPAEAERVA >Mature_377_residues MNCKALIFLVPHPNTPIVTFDSIAALWAKTDVTGQMLLLIALAGVAIFAIRHLQSLIWNLSEFSRFRRSSAYLQLRETNG AVMLMALPLTLAMTINVAFVSGAVFVPGLWNVVEYLFPFAMTAFLLVGVLALRTFADIFGRALANGHFDCTRNNNLTQLL AAFAFAMVGVGMAAPAAMSTVKLTIGLSMLGTIFFITAAVVIALILLVLGARAMLTNGLAVEAGPSLWMPIPLLTLIGIA MLRISHGLHSGFELHIEAPHRLLITAVFFSLQLLAGLLGLSVLRRVGYFRTYLNGPARSPGAYGLICPAVGLFVFGMFFL HVGLVQNGLIEKFSPVYFVALAALAVVQVLGIITMFRLDRRLLAQPARSPAEAERVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40669; Mature: 40669
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCKALIFLVPHPNTPIVTFDSIAALWAKTDVTGQMLLLIALAGVAIFAIRHLQSLIWNL CCCCEEEEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEFSRFRRSSAYLQLRETNGAVMLMALPLTLAMTINVAFVSGAVFVPGLWNVVEYLFPFA HHHHHHHHHHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH MTAFLLVGVLALRTFADIFGRALANGHFDCTRNNNLTQLLAAFAFAMVGVGMAAPAAMST HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH VKLTIGLSMLGTIFFITAAVVIALILLVLGARAMLTNGLAVEAGPSLWMPIPLLTLIGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCCHHHHHHHHHHH MLRISHGLHSGFELHIEAPHRLLITAVFFSLQLLAGLLGLSVLRRVGYFRTYLNGPARSP HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GAYGLICPAVGLFVFGMFFLHVGLVQNGLIEKFSPVYFVALAALAVVQVLGIITMFRLDR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLAQPARSPAEAERVA HHHHCCCCCCCHHHCCC >Mature Secondary Structure MNCKALIFLVPHPNTPIVTFDSIAALWAKTDVTGQMLLLIALAGVAIFAIRHLQSLIWNL CCCCEEEEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEFSRFRRSSAYLQLRETNGAVMLMALPLTLAMTINVAFVSGAVFVPGLWNVVEYLFPFA HHHHHHHHHHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH MTAFLLVGVLALRTFADIFGRALANGHFDCTRNNNLTQLLAAFAFAMVGVGMAAPAAMST HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH VKLTIGLSMLGTIFFITAAVVIALILLVLGARAMLTNGLAVEAGPSLWMPIPLLTLIGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCCHHHHHHHHHHH MLRISHGLHSGFELHIEAPHRLLITAVFFSLQLLAGLLGLSVLRRVGYFRTYLNGPARSP HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GAYGLICPAVGLFVFGMFFLHVGLVQNGLIEKFSPVYFVALAALAVVQVLGIITMFRLDR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLAQPARSPAEAERVA HHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA