| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yqgH [H]
Identifier: 222523575
GI number: 222523575
Start: 338656
End: 339570
Strand: Reverse
Name: yqgH [H]
Synonym: Chy400_0281
Alternate gene names: 222523575
Gene position: 339570-338656 (Counterclockwise)
Preceding gene: 222523576
Following gene: 222523574
Centisome position: 6.44
GC content: 49.29
Gene sequence:
>915_bases GTGGCTGTTTTTGACCTCCGTAGACAACCAAATCAGGCTCGTGCTATTGGCGAGAAAATCATTCAAATTTTGCTGACTAT AGCAGCAACCGTTTCTATTCTCACAACTGCTGGAATTGTCTTTTCGCTCCTCTTTGAAACAATTGCTTTCTTTAGAGAAG TCTCTATCGTCGAATTCCTCACCGAAACGGAATGGACACCCCTTTTCTCGATCAAGAAGTACGGCATCTGGCCATTGGTG TCGGCAACCGTTCTTACTTCTGCGATTGCAATGGTTGTCGCGGTGCCGCTTGGCCTGATTGCGGCGATTTTCCTGAGTGA GTTTGCCTCAGATCGCATTCGACGCACGGTGAAGCCTCTGCTTGAAATCCTTGCCGGTATTCCAACTGTAGTCTACGGCT ATTTTGCTCTCACAGTGGTAACACCATTTCTCAAGAACTTCATTCCAACCCTCAGCATCTTTAATTCACTCGGTGCCGGG CTTGTGATGGGAGTCATGCTGATACCGTTTGTCGCTTCATTGAGTGAAGATGCGTTATCGGCAGTACCCAACTCGCTCCG TGAAGCAGCGTATGGGCTGGGTTCTACCAGATTTGAGGTTGCTACACGAGTCGTAGCACCGGCAGCCATTTCGGGTATTG TTGCCTCGATTGTCCTGGCTTTCTCACGGGCTGTTGGTGAAACAATGATTGTCGCCATTGCTGCCGGGCAAAATCCCCGC TTTACCTTCGATCCAACGGTGCCGGTGATGACAATGACCTCGTACATCGTCCAGGTCAGTTTGGGTGACACACCGTATGG CTCACTCAGCTATTACACGCTGTACGCGGTTGGTTTTACACTCTTCCTCTTCACCTTTGTGCTCAACATCTTCAGTTATT GGATGGTGCGCAAGTTCCGGGAGGTTTACGATTAA
Upstream 100 bases:
>100_bases AGATGATGGCGGTATGAGCAAGCCGATGGCGCTTGCTCATACCGCATCTCTGTGGTAGGCTAGAGATAAAAGAAAACCAT CTTCTGACAAGGAGGATTGC
Downstream 100 bases:
>100_bases TGTCTGCACAGGAACAGATTCGCGTGAGTGCTCAGACGGCCGAGCCTATCGTTGATCGGGGTGGCGGTAATCTGAAGTGG CGTCATTTCAAGGGAACATT
Product: phosphate ABC transporter inner membrane subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAVFDLRRQPNQARAIGEKIIQILLTIAATVSILTTAGIVFSLLFETIAFFREVSIVEFLTETEWTPLFSIKKYGIWPLV SATVLTSAIAMVVAVPLGLIAAIFLSEFASDRIRRTVKPLLEILAGIPTVVYGYFALTVVTPFLKNFIPTLSIFNSLGAG LVMGVMLIPFVASLSEDALSAVPNSLREAAYGLGSTRFEVATRVVAPAAISGIVASIVLAFSRAVGETMIVAIAAGQNPR FTFDPTVPVMTMTSYIVQVSLGDTPYGSLSYYTLYAVGFTLFLFTFVLNIFSYWMVRKFREVYD
Sequences:
>Translated_304_residues MAVFDLRRQPNQARAIGEKIIQILLTIAATVSILTTAGIVFSLLFETIAFFREVSIVEFLTETEWTPLFSIKKYGIWPLV SATVLTSAIAMVVAVPLGLIAAIFLSEFASDRIRRTVKPLLEILAGIPTVVYGYFALTVVTPFLKNFIPTLSIFNSLGAG LVMGVMLIPFVASLSEDALSAVPNSLREAAYGLGSTRFEVATRVVAPAAISGIVASIVLAFSRAVGETMIVAIAAGQNPR FTFDPTVPVMTMTSYIVQVSLGDTPYGSLSYYTLYAVGFTLFLFTFVLNIFSYWMVRKFREVYD >Mature_303_residues AVFDLRRQPNQARAIGEKIIQILLTIAATVSILTTAGIVFSLLFETIAFFREVSIVEFLTETEWTPLFSIKKYGIWPLVS ATVLTSAIAMVVAVPLGLIAAIFLSEFASDRIRRTVKPLLEILAGIPTVVYGYFALTVVTPFLKNFIPTLSIFNSLGAGL VMGVMLIPFVASLSEDALSAVPNSLREAAYGLGSTRFEVATRVVAPAAISGIVASIVLAFSRAVGETMIVAIAAGQNPRF TFDPTVPVMTMTSYIVQVSLGDTPYGSLSYYTLYAVGFTLFLFTFVLNIFSYWMVRKFREVYD
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=313, Percent_Identity=28.4345047923323, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1790163, Length=296, Percent_Identity=27.027027027027, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33168; Mature: 33036
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFDLRRQPNQARAIGEKIIQILLTIAATVSILTTAGIVFSLLFETIAFFREVSIVEFL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TETEWTPLFSIKKYGIWPLVSATVLTSAIAMVVAVPLGLIAAIFLSEFASDRIRRTVKPL HHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEILAGIPTVVYGYFALTVVTPFLKNFIPTLSIFNSLGAGLVMGVMLIPFVASLSEDALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVPNSLREAAYGLGSTRFEVATRVVAPAAISGIVASIVLAFSRAVGETMIVAIAAGQNPR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCC FTFDPTVPVMTMTSYIVQVSLGDTPYGSLSYYTLYAVGFTLFLFTFVLNIFSYWMVRKFR EEECCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYD HHCC >Mature Secondary Structure AVFDLRRQPNQARAIGEKIIQILLTIAATVSILTTAGIVFSLLFETIAFFREVSIVEFL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TETEWTPLFSIKKYGIWPLVSATVLTSAIAMVVAVPLGLIAAIFLSEFASDRIRRTVKPL HHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEILAGIPTVVYGYFALTVVTPFLKNFIPTLSIFNSLGAGLVMGVMLIPFVASLSEDALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVPNSLREAAYGLGSTRFEVATRVVAPAAISGIVASIVLAFSRAVGETMIVAIAAGQNPR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCC FTFDPTVPVMTMTSYIVQVSLGDTPYGSLSYYTLYAVGFTLFLFTFVLNIFSYWMVRKFR EEECCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYD HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]