| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is sphX [H]
Identifier: 222523576
GI number: 222523576
Start: 339678
End: 341726
Strand: Reverse
Name: sphX [H]
Synonym: Chy400_0282
Alternate gene names: 222523576
Gene position: 341726-339678 (Counterclockwise)
Preceding gene: 222523579
Following gene: 222523575
Centisome position: 6.49
GC content: 58.81
Gene sequence:
>2049_bases ATGGTAGGAAACCCGAAACGATGGATCTACGGCCTTATGCTGATAGCACTGATCGTACCGGTCATTGCTGCCTGTGGTCC GCAGCCGGCGGCCCAGCCAACTGCGGCTCCAGCCCAGCCAACTGCGGCTTCAGCCCAGCCAACTGCGCCTGCCTCTGAGC TGGCTTCGTTGAGTGGCGACATCATTATTGACGGTTCATCAACGGTGTATCCGCCGACCGCTGCTGCTGCCGAGGAATTC TCACGGCTGGCACCGAATGTGCGGGTGAGCGTGGGCATTTCGGGTACCGGTGGCGGGTTCAAGAAGTTCTGCAACGGCGA GACGGACATCTCGAACGCCTCACGCCCGATCCGCGAGGAGGAGCAGGCCATCTGTGCGCAGAACGGGATCGAGTTCATCG AGCTACCGGTGGCGTATGACGGCCTGTCGGTGGTGGTCAATCCGCAGAACGACTGGGTTACCTGTCTGACCGTGGCCGAG CTGAAGAAGATTTGGGAGCCGGCAGCGCAGGGCGTGATCACGAACTGGAACCAGGTGCGCGAAGGGTTCCCGAACCGCCC GCTGGTGCTGTTGGGTGCCGGGACAGACTCGGGTACATTTGACTACTTCACCGAAGCGATTGTCGGCGAAGCCAAGGCAA GCCGTGGTGACTATCAGGCCACCGAGGATGACAACGTGACGATTACCGGTGTCAGTGGTGACCTGAACGCGATGGGGTAT CTCGGCTACGCTTACGTAGTTGAGAACCAGGGCAAGATCAAGCCGATTGCAATTGACAATGGCAATGGTTGTGTCGAGCC AAGCTTCGAGACGATTGCTGACGCTTCCTATCAGCCGCTGTCACGCCCACTGTTCATCTACGTCAATAAGGAAGCCGCTG AGCGACCAGAAGTGCAGGCGTTCGTCAACTTCTACCTCAGCCCGGAGTTCACCCCAATCATTCAGACCCCGCAGGTTGGC TACGTGAAACTGTCGGACGAGCTGTATGCCGCGATTGCCAAGCGCTTCAATGACCGCGTGCTGGGCACAATGGTACGGCC CGGTGAAGAGGTTGGTTTGACCCTGGATCGCTACCTGACCGGCGAAATGCCACCGCTGCCGTCGAGTGCCCCCACCTTTG ACTACGCAACGCTAAGTGGTGACATCATTATTGACGGTTCATCAACGGTGTATCCGCCGACCGCTGCTGCTGCCGAGGAA TTCTCGCGACTGGCCTCGAATGTGCGGGTGAGCGTGGGCATTTCGGGCACCGGTGGCGGGTTCAAGAAGTTCTGCAACGG CGAGACGGACATCTCGAACGCCTCACGCCCGATCCGCGAGGAGGAGCAGGCCATCTGTGCGCAGAACGGGATCGAGTTCA TCGAGCTGCCGGTGGCGTATGACGGTCTGTCGGTAGTGGTCAATCCGCAGAACGACTGGGCTACCTGTCTGACCGTGGCC GAGCTGAAGAAGATTTGGGAGCCGGCAGCGCAAGGGGTCATCACGAACTGGAACCAGGTGCGCGAAGGGTTCCCGGATCG GCCACTGGTGCTGTTGGGTGCCGGGACAGACTCGGGTACATTCGACTACTTCACCGAAGCGATTGTCGGCGAGGCCAAGG CAAGTCGTGGTGACTATCAGGCCACCGAAGATGACAACGTGACGATTACCGGCGTGAGTGGTGACCTGAACGCGATGGGG TATCTCGGCTACGCCTACGTAGTTGAGAACCAGGGCAAGATCAAGCCGATTGCGGTTGACAATGGCAACGGTTGTGTCGA GCCGAGCTTCGAGACGATTGCTGACGCTACCTATCAGCCGCTGTCACGCCCACTGTTCATCTACGTCAATAAGGAAGCCG CTGAGCGACCAGAGGTACAGGCGTTCGTCAACTTCTACCTCAGCCCGGAGTTCACCCCAATCATTCAGACCCCACAGGTT GGCTACGTGAAACTGTCGGATGAGCTGTATGCCGCGATTGCCAAGCGCTTCAATGACCGTGTCGTGGGAACGCTGGTAAA GCCCGGTGAGGAAGTTGGTCTGACCCTGGATCGGTATTTAGGAAAGTAA
Upstream 100 bases:
>100_bases AGTGGCGCACCCTGAAGTGCCGGTAGCCAGGCGATGTCAAGCCCTGGCCTCCGCTTGCGCTTGCAGATTGCAGACAGTAG TTGAAGGAGAGACACTCACT
Downstream 100 bases:
>100_bases GATAGAGAGATGATGGCGGTATGAGCAAGCCGATGGCGCTTGCTCATACCGCATCTCTGTGGTAGGCTAGAGATAAAAGA AAACCATCTTCTGACAAGGA
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MVGNPKRWIYGLMLIALIVPVIAACGPQPAAQPTAAPAQPTAASAQPTAPASELASLSGDIIIDGSSTVYPPTAAAAEEF SRLAPNVRVSVGISGTGGGFKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWVTCLTVAE LKKIWEPAAQGVITNWNQVREGFPNRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMGY LGYAYVVENQGKIKPIAIDNGNGCVEPSFETIADASYQPLSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQVG YVKLSDELYAAIAKRFNDRVLGTMVRPGEEVGLTLDRYLTGEMPPLPSSAPTFDYATLSGDIIIDGSSTVYPPTAAAAEE FSRLASNVRVSVGISGTGGGFKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWATCLTVA ELKKIWEPAAQGVITNWNQVREGFPDRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMG YLGYAYVVENQGKIKPIAVDNGNGCVEPSFETIADATYQPLSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQV GYVKLSDELYAAIAKRFNDRVVGTLVKPGEEVGLTLDRYLGK
Sequences:
>Translated_682_residues MVGNPKRWIYGLMLIALIVPVIAACGPQPAAQPTAAPAQPTAASAQPTAPASELASLSGDIIIDGSSTVYPPTAAAAEEF SRLAPNVRVSVGISGTGGGFKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWVTCLTVAE LKKIWEPAAQGVITNWNQVREGFPNRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMGY LGYAYVVENQGKIKPIAIDNGNGCVEPSFETIADASYQPLSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQVG YVKLSDELYAAIAKRFNDRVLGTMVRPGEEVGLTLDRYLTGEMPPLPSSAPTFDYATLSGDIIIDGSSTVYPPTAAAAEE FSRLASNVRVSVGISGTGGGFKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWATCLTVA ELKKIWEPAAQGVITNWNQVREGFPDRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMG YLGYAYVVENQGKIKPIAVDNGNGCVEPSFETIADATYQPLSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQV GYVKLSDELYAAIAKRFNDRVVGTLVKPGEEVGLTLDRYLGK >Mature_682_residues MVGNPKRWIYGLMLIALIVPVIAACGPQPAAQPTAAPAQPTAASAQPTAPASELASLSGDIIIDGSSTVYPPTAAAAEEF SRLAPNVRVSVGISGTGGGFKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWVTCLTVAE LKKIWEPAAQGVITNWNQVREGFPNRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMGY LGYAYVVENQGKIKPIAIDNGNGCVEPSFETIADASYQPLSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQVG YVKLSDELYAAIAKRFNDRVLGTMVRPGEEVGLTLDRYLTGEMPPLPSSAPTFDYATLSGDIIIDGSSTVYPPTAAAAEE FSRLASNVRVSVGISGTGGGFKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWATCLTVA ELKKIWEPAAQGVITNWNQVREGFPDRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMG YLGYAYVVENQGKIKPIAVDNGNGCVEPSFETIADATYQPLSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQV GYVKLSDELYAAIAKRFNDRVVGTLVKPGEEVGLTLDRYLGK
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73177; Mature: 73177
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGNPKRWIYGLMLIALIVPVIAACGPQPAAQPTAAPAQPTAASAQPTAPASELASLSGD CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC IIIDGSSTVYPPTAAAAEEFSRLAPNVRVSVGISGTGGGFKKFCNGETDISNASRPIREE EEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHH EQAICAQNGIEFIELPVAYDGLSVVVNPQNDWVTCLTVAELKKIWEPAAQGVITNWNQVR HHHHHHHCCCEEEEEEEEECCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEECCCHHHH EGFPNRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMGY HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEE LGYAYVVENQGKIKPIAIDNGNGCVEPSFETIADASYQPLSRPLFIYVNKEAAERPEVQA EEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCHHEE FVNFYLSPEFTPIIQTPQVGYVKLSDELYAAIAKRFNDRVLGTMVRPGEEVGLTLDRYLT EEEEEECCCCCEEECCCCCCEEEECHHHHHHHHHHHCCHHHHHHCCCCHHHCEEHHHHCC GEMPPLPSSAPTFDYATLSGDIIIDGSSTVYPPTAAAAEEFSRLASNVRVSVGISGTGGG CCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC FKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWATCLTVA HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCEEEEECCCCCHHHHHHHH ELKKIWEPAAQGVITNWNQVREGFPDRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQ HHHHHHHHHHCCEECCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC ATEDDNVTITGVSGDLNAMGYLGYAYVVENQGKIKPIAVDNGNGCVEPSFETIADATYQP CCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCC LSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQVGYVKLSDELYAAIAKRFNDR CCCCEEEEEECCCCCCCHHEEEEEEEECCCCCEEECCCCCCEEEECHHHHHHHHHHHCCC VVGTLVKPGEEVGLTLDRYLGK EEEEEECCCHHHCEEHHHHHCC >Mature Secondary Structure MVGNPKRWIYGLMLIALIVPVIAACGPQPAAQPTAAPAQPTAASAQPTAPASELASLSGD CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC IIIDGSSTVYPPTAAAAEEFSRLAPNVRVSVGISGTGGGFKKFCNGETDISNASRPIREE EEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHH EQAICAQNGIEFIELPVAYDGLSVVVNPQNDWVTCLTVAELKKIWEPAAQGVITNWNQVR HHHHHHHCCCEEEEEEEEECCEEEEECCCCCCEEEEEHHHHHHHHHHHHCCEECCCHHHH EGFPNRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQATEDDNVTITGVSGDLNAMGY HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEE LGYAYVVENQGKIKPIAIDNGNGCVEPSFETIADASYQPLSRPLFIYVNKEAAERPEVQA EEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCHHEE FVNFYLSPEFTPIIQTPQVGYVKLSDELYAAIAKRFNDRVLGTMVRPGEEVGLTLDRYLT EEEEEECCCCCEEECCCCCCEEEECHHHHHHHHHHHCCHHHHHHCCCCHHHCEEHHHHCC GEMPPLPSSAPTFDYATLSGDIIIDGSSTVYPPTAAAAEEFSRLASNVRVSVGISGTGGG CCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC FKKFCNGETDISNASRPIREEEQAICAQNGIEFIELPVAYDGLSVVVNPQNDWATCLTVA HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCEEEEECCCCCHHHHHHHH ELKKIWEPAAQGVITNWNQVREGFPDRPLVLLGAGTDSGTFDYFTEAIVGEAKASRGDYQ HHHHHHHHHHCCEECCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC ATEDDNVTITGVSGDLNAMGYLGYAYVVENQGKIKPIAVDNGNGCVEPSFETIADATYQP CCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCC LSRPLFIYVNKEAAERPEVQAFVNFYLSPEFTPIIQTPQVGYVKLSDELYAAIAKRFNDR CCCCEEEEEECCCCCCCHHEEEEEEEECCCCCEEECCCCCCEEEECHHHHHHHHHHHCCC VVGTLVKPGEEVGLTLDRYLGK EEEEEECCCHHHCEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]