| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yhhP [C]
Identifier: 222523535
GI number: 222523535
Start: 289531
End: 289779
Strand: Direct
Name: yhhP [C]
Synonym: Chy400_0241
Alternate gene names: 222523535
Gene position: 289531-289779 (Clockwise)
Preceding gene: 222523534
Following gene: 222523536
Centisome position: 5.5
GC content: 57.43
Gene sequence:
>249_bases ATGCCACACTTCGATCAAACGCTTGATGTCAAAGGGGCAAAATGCCCGATGCCACTGGTGAAGAGCCGTAAGGCAATTAC CGAACTGCCGGTAGGTCAGGTTCTGCAAGTTATCTCGACTGACCGCGGCTCGGTAGCCGACTTCCAGGGCTGGGCCAAGA CGGCGAAGAACGTCGAACTGATCGCCCAGGAGACGGTACAGGAGAATGGTCAGGAGCTGTACGTCCACTATCTCCGCCGC ACCGCCTGA
Upstream 100 bases:
>100_bases TGTGCACTGGCCGGGTAACGGTGTACAAAGGTATGAGTACTGGCGGCAGATCACGCTACTGCCGCCGAATATACAGTACA ATACAAGGAAGGAGAATCAT
Downstream 100 bases:
>100_bases CCCCACATTCGGTTGCGCTGGTAGATCAACACAGGCAGAGGATGGAAAACAATGACAACACCAATGACAGAAACAGTTGA CACGCAGGCGCTGCTGAGCA
Product: SirA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPHFDQTLDVKGAKCPMPLVKSRKAITELPVGQVLQVISTDRGSVADFQGWAKTAKNVELIAQETVQENGQELYVHYLRR TA
Sequences:
>Translated_82_residues MPHFDQTLDVKGAKCPMPLVKSRKAITELPVGQVLQVISTDRGSVADFQGWAKTAKNVELIAQETVQENGQELYVHYLRR TA >Mature_81_residues PHFDQTLDVKGAKCPMPLVKSRKAITELPVGQVLQVISTDRGSVADFQGWAKTAKNVELIAQETVQENGQELYVHYLRRT A
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 9153; Mature: 9021
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFDQTLDVKGAKCPMPLVKSRKAITELPVGQVLQVISTDRGSVADFQGWAKTAKNVEL CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IAQETVQENGQELYVHYLRRTA HHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure PHFDQTLDVKGAKCPMPLVKSRKAITELPVGQVLQVISTDRGSVADFQGWAKTAKNVEL CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IAQETVQENGQELYVHYLRRTA HHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9847077; 11016950 [H]