Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523522
Identifier: 222523522
GI number: 222523522
Start: 273162
End: 274019
Strand: Reverse
Name: 222523522
Synonym: Chy400_0228
Alternate gene names: NA
Gene position: 274019-273162 (Counterclockwise)
Preceding gene: 222523524
Following gene: 222523514
Centisome position: 5.2
GC content: 55.48
Gene sequence:
>858_bases ATGTTTTCCGATCAGTCTATACTACAGAATTTGCGTCGTGCTGTTGTCACGCTCTTTGCTGTCTACCTTTTCATTTATCC CTTTGCAATCGTGTTGGTGGCCCTTGATAAGGTGCCGGTCTGGGGAACGTGGATGGGAGGAGCGCTGCTTATTTTGCAAG GCACGCTCATGGGATTCTGGTTGACGGTTCGTTATCGGTGGTGGGGGGCGATTGCTGCTGGTCTGATCCTGGTCGTATCC TGGGCGGTTGAGCATGTGGGGGCAACCACAGGCTTCCCTTTTGGTAGCTATTCGTACACCGATGTGCTGCAACCACAAAT TTTTGGCGTGGTGCCACTGGCAATCCCGTTTGCCTGGCTCTTGATCGTGGTTGCGGCAGTTGGTGTGGCCGAGCGCATCG GCCACCGCGATGGTAAGCCGGTCAATGATCATCAGCTTAATCCAACTCGCGTGCTGACGGCGGCATCATTCGCGTTGTTA CTTGACGTAACTATTGAGCCGTTTGCCGTCTATATCAACCGTTACTGGGTCTGGTCAAGCGCAGAGGGTGGAGTCTATTA CGGCATTCCGGCTTCCAACTTTATCGCGTGGTGGGTGACGAGTCTGATCCTGTCGTGGGTGTTGCTCCATCAGCGACGAT CAGCCGCTCGCCGTGGTCATACGCCACAGCCGTTTATGATCTGGCTGCCACCAGTGCTCTACCTGACCAATCTGACGATG TTTGTCGTAGTCAATCTTGCCCGTGGTCAGGTCTTGCCCGCCCTGATTGGTGGTTTGATTATGATCGTGCTCGCAGGCGA TTGGCTGCTACCGCGGCTGGCCCGTCGTCTCCGCCGCGTCGCCGAAACCAACCCCTGA
Upstream 100 bases:
>100_bases AATATAACGCCATGGCTTTGACAGGCCATGAAAGCGAATCTATAATCAACTATAGGGGCTACCGAATGGTATGACCCATT TATCAGGGATATACTACTCT
Downstream 100 bases:
>100_bases CTGCGTCCCAGGTGCGGTCAATGCCCCAGCGTCCACTGAGCAGCGGCTGAAAGCGACCGAGCCGCTGCTCGATCACATCA GTACGTAATCGGTCAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MFSDQSILQNLRRAVVTLFAVYLFIYPFAIVLVALDKVPVWGTWMGGALLILQGTLMGFWLTVRYRWWGAIAAGLILVVS WAVEHVGATTGFPFGSYSYTDVLQPQIFGVVPLAIPFAWLLIVVAAVGVAERIGHRDGKPVNDHQLNPTRVLTAASFALL LDVTIEPFAVYINRYWVWSSAEGGVYYGIPASNFIAWWVTSLILSWVLLHQRRSAARRGHTPQPFMIWLPPVLYLTNLTM FVVVNLARGQVLPALIGGLIMIVLAGDWLLPRLARRLRRVAETNP
Sequences:
>Translated_285_residues MFSDQSILQNLRRAVVTLFAVYLFIYPFAIVLVALDKVPVWGTWMGGALLILQGTLMGFWLTVRYRWWGAIAAGLILVVS WAVEHVGATTGFPFGSYSYTDVLQPQIFGVVPLAIPFAWLLIVVAAVGVAERIGHRDGKPVNDHQLNPTRVLTAASFALL LDVTIEPFAVYINRYWVWSSAEGGVYYGIPASNFIAWWVTSLILSWVLLHQRRSAARRGHTPQPFMIWLPPVLYLTNLTM FVVVNLARGQVLPALIGGLIMIVLAGDWLLPRLARRLRRVAETNP >Mature_285_residues MFSDQSILQNLRRAVVTLFAVYLFIYPFAIVLVALDKVPVWGTWMGGALLILQGTLMGFWLTVRYRWWGAIAAGLILVVS WAVEHVGATTGFPFGSYSYTDVLQPQIFGVVPLAIPFAWLLIVVAAVGVAERIGHRDGKPVNDHQLNPTRVLTAASFALL LDVTIEPFAVYINRYWVWSSAEGGVYYGIPASNFIAWWVTSLILSWVLLHQRRSAARRGHTPQPFMIWLPPVLYLTNLTM FVVVNLARGQVLPALIGGLIMIVLAGDWLLPRLARRLRRVAETNP
Specific function: Unknown
COG id: COG2324
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31838; Mature: 31838
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDQSILQNLRRAVVTLFAVYLFIYPFAIVLVALDKVPVWGTWMGGALLILQGTLMGFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LTVRYRWWGAIAAGLILVVSWAVEHVGATTGFPFGSYSYTDVLQPQIFGVVPLAIPFAWL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH LIVVAAVGVAERIGHRDGKPVNDHQLNPTRVLTAASFALLLDVTIEPFAVYINRYWVWSS HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC AEGGVYYGIPASNFIAWWVTSLILSWVLLHQRRSAARRGHTPQPFMIWLPPVLYLTNLTM CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH FVVVNLARGQVLPALIGGLIMIVLAGDWLLPRLARRLRRVAETNP HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFSDQSILQNLRRAVVTLFAVYLFIYPFAIVLVALDKVPVWGTWMGGALLILQGTLMGFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LTVRYRWWGAIAAGLILVVSWAVEHVGATTGFPFGSYSYTDVLQPQIFGVVPLAIPFAWL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH LIVVAAVGVAERIGHRDGKPVNDHQLNPTRVLTAASFALLLDVTIEPFAVYINRYWVWSS HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC AEGGVYYGIPASNFIAWWVTSLILSWVLLHQRRSAARRGHTPQPFMIWLPPVLYLTNLTM CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH FVVVNLARGQVLPALIGGLIMIVLAGDWLLPRLARRLRRVAETNP HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA