| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is menA [H]
Identifier: 222523399
GI number: 222523399
Start: 124173
End: 125078
Strand: Direct
Name: menA [H]
Synonym: Chy400_0101
Alternate gene names: 222523399
Gene position: 124173-125078 (Clockwise)
Preceding gene: 222523398
Following gene: 222523400
Centisome position: 2.36
GC content: 61.7
Gene sequence:
>906_bases ATGACAACCAAAGCAACATCAGTACCACCATCACACCTCAAAATCTGGCTAATGGCGAGCCGCCCGGCAACACTCCCGGC AGCCGTCGTACCGGTACTGGTCGGCTCAGCCCTGGCCTACAGCAGTGACGCATTTCAACCACTGGTGATGCTGGCTGCAC TACTCGGTGCACTCTTCATTCAAATCGGCACCAATCTCGCCAACGACTACTTCGATGCCCAAAAAGGCGCCGACACCAGC GAACGCCTCGGCCCGGTACGGGTCACCCAGAGCGGCCTGCTCCCCGCACGCACAGTACTCACAGCAGCCCTGGTGAGCTT TGGCCTGGCGGCCCTGGCCGGCATCTACCTGATCACCGTTGCCGGCTGGCCCATCCTGGTCATCGGCTTACTCTCAATCG CCGCCGGCATCCTCTACACCGCCGGCCCCTTCCCCCTCGGCTACCACGGCCTCGGCGACCTGTTCACCTTCGTCTTCTTC GGATTGGTAGCCGTTATCGGCACCGACTTCGCCCACACCGGCCAGTTCCGCTGGATTGCCCTATGGGCAGCGTTACCGAT AGCCATGCTGGTCACCGCGATCCTCGTCGTCAACAACCTGCGCGACGCACCCACCGACCGCAAAGCCGGCAAACGCACCC TGGCCGTCATCTTCGGCGAACGGTTCGCCCGCAGCGAATTTGCCATCCTGGTCATCGGAGCATTCGTATCACTGCCCCTG GCCTGGATGTGGGGCGGAGCCTCACCATTCACCCTGCTGGCCTGGCTAACCGCACCAATGGCACTCAACCTGATCGACTT CGTCAACCGCGAACGCGGTCGGGCCCTCAACAAAGCCCTGGTCGGCGCTGGCCGATTACATCTGGCGTTCGGCGTACTCT TCGCAATTGGGTTGTTATTTGGCTAA
Upstream 100 bases:
>100_bases CATCTCCCCTCCCCTAACTCCTCCCCCCAGCGGGGGGAGGCTGGGAGGGGGGCGAGGGGTGAAGTGAGCGCCACCACTCA CGTGACAGAAAGAGCACACT
Downstream 100 bases:
>100_bases TCCAGACACCAGACCGACCGGCACCCCAGGCCGCGCATCCACACTGTCCGGCCCTGCCAACTGGCGAGAGTACCTTGCCG TACAATGTCGTGGCTGCTCA
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTTKATSVPPSHLKIWLMASRPATLPAAVVPVLVGSALAYSSDAFQPLVMLAALLGALFIQIGTNLANDYFDAQKGADTS ERLGPVRVTQSGLLPARTVLTAALVSFGLAALAGIYLITVAGWPILVIGLLSIAAGILYTAGPFPLGYHGLGDLFTFVFF GLVAVIGTDFAHTGQFRWIALWAALPIAMLVTAILVVNNLRDAPTDRKAGKRTLAVIFGERFARSEFAILVIGAFVSLPL AWMWGGASPFTLLAWLTAPMALNLIDFVNRERGRALNKALVGAGRLHLAFGVLFAIGLLFG
Sequences:
>Translated_301_residues MTTKATSVPPSHLKIWLMASRPATLPAAVVPVLVGSALAYSSDAFQPLVMLAALLGALFIQIGTNLANDYFDAQKGADTS ERLGPVRVTQSGLLPARTVLTAALVSFGLAALAGIYLITVAGWPILVIGLLSIAAGILYTAGPFPLGYHGLGDLFTFVFF GLVAVIGTDFAHTGQFRWIALWAALPIAMLVTAILVVNNLRDAPTDRKAGKRTLAVIFGERFARSEFAILVIGAFVSLPL AWMWGGASPFTLLAWLTAPMALNLIDFVNRERGRALNKALVGAGRLHLAFGVLFAIGLLFG >Mature_300_residues TTKATSVPPSHLKIWLMASRPATLPAAVVPVLVGSALAYSSDAFQPLVMLAALLGALFIQIGTNLANDYFDAQKGADTSE RLGPVRVTQSGLLPARTVLTAALVSFGLAALAGIYLITVAGWPILVIGLLSIAAGILYTAGPFPLGYHGLGDLFTFVFFG LVAVIGTDFAHTGQFRWIALWAALPIAMLVTAILVVNNLRDAPTDRKAGKRTLAVIFGERFARSEFAILVIGAFVSLPLA WMWGGASPFTLLAWLTAPMALNLIDFVNRERGRALNKALVGAGRLHLAFGVLFAIGLLFG
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=289, Percent_Identity=28.0276816608997, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1790365, Length=272, Percent_Identity=39.3382352941176, Blast_Score=168, Evalue=4e-43, Organism=Drosophila melanogaster, GI17737429, Length=292, Percent_Identity=29.4520547945205, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 31814; Mature: 31683
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKATSVPPSHLKIWLMASRPATLPAAVVPVLVGSALAYSSDAFQPLVMLAALLGALFI CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QIGTNLANDYFDAQKGADTSERLGPVRVTQSGLLPARTVLTAALVSFGLAALAGIYLITV HHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGWPILVIGLLSIAAGILYTAGPFPLGYHGLGDLFTFVFFGLVAVIGTDFAHTGQFRWIA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHH LWAALPIAMLVTAILVVNNLRDAPTDRKAGKRTLAVIFGERFARSEFAILVIGAFVSLPL HHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AWMWGGASPFTLLAWLTAPMALNLIDFVNRERGRALNKALVGAGRLHLAFGVLFAIGLLF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC G C >Mature Secondary Structure TTKATSVPPSHLKIWLMASRPATLPAAVVPVLVGSALAYSSDAFQPLVMLAALLGALFI CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QIGTNLANDYFDAQKGADTSERLGPVRVTQSGLLPARTVLTAALVSFGLAALAGIYLITV HHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGWPILVIGLLSIAAGILYTAGPFPLGYHGLGDLFTFVFFGLVAVIGTDFAHTGQFRWIA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHH LWAALPIAMLVTAILVVNNLRDAPTDRKAGKRTLAVIFGERFARSEFAILVIGAFVSLPL HHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AWMWGGASPFTLLAWLTAPMALNLIDFVNRERGRALNKALVGAGRLHLAFGVLFAIGLLF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9573170; 8346018; 9278503 [H]