| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is menB [H]
Identifier: 222523398
GI number: 222523398
Start: 122876
End: 123703
Strand: Direct
Name: menB [H]
Synonym: Chy400_0100
Alternate gene names: 222523398
Gene position: 122876-123703 (Clockwise)
Preceding gene: 222523397
Following gene: 222523399
Centisome position: 2.33
GC content: 59.66
Gene sequence:
>828_bases ATGCCAATCGAGTGGGTCAAAGTTCACGATTATACCGACATCATCTACGAACACGATGCTGCCGGTGAAGGCATTGCCAA AATTACCATCAACCGTCCCGAAAAGCGCAACGCATTTCGTCCGGAAACCGTCAACGAGCTGATTGACGCCTTCTCGCGTG CACGCGACGACGAACGGATCGGTGTGATCCTCTTCACCGGTGCCGGCGACAAAGCGTTCTGCTCCGGCGGTGATCAGAGC GTGCGCGGCATTGGCGGGTACGTCGGCAAAGACCAGATTCCACGCCTGAACGTGCTCGACCTCCAGCGCCTGATTCGCAT CATTCCCAAACCGGTCATCGCCCTGGTCGCCGGCTACGCCATCGGCGGCGGACACGTCTTGCACGTCGTCTGCGACCTGA CCATCGCTGCCGACAATGCCATCTTTGGTCAGACCGGGCCAAAAGTGGGAAGCTTTGACGGCGGTTACGGTTCAAACCTG CTGGCCCGCATGGTCGGCGACAAAAAAGCGCGTGAAATCTGGTACCTCTGCCGCCAATACAACGCACAGCAGGCACTCGA AATGGGGCTGGTCAACGCCGTGGTCCCCCTCGAACGCCTCGAAGACGAGGGCGTGCAATGGGCACGCGAAATCCTCGAAA AGAGTCCACTGGCCATCCGCATGCTCAAAGCCAGCATCAACGCTGCCGCCGACGGCTATGCCGGACTCCAGCAACTGGCC GGTGACGCAACCCTGCTCTACTACCTGACCGAAGAGGCGCAGGAGGGCAAACAAGCCTTCCTCGAAAAGCGCAAGCCCAA CTTCCGCCGCTTCCGTCGCTACCCGTAA
Upstream 100 bases:
>100_bases TGAAATACGTCAGGCCATTCCGCACATCGCCAAACCACCGACACCAATGATTGTGGTACATTATTAATAGGGAACGATAA GCACAAGTGCGAGGAAACCT
Downstream 100 bases:
>100_bases ACGCGACACACCGGTAGGCAAGGGCACACCCCCACCCCCTCCCCCAACTCCTCCCCCCAGCGGGGGAGGCCGAAAAAATT GACAACTCCTCCCCCCAACG
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MPIEWVKVHDYTDIIYEHDAAGEGIAKITINRPEKRNAFRPETVNELIDAFSRARDDERIGVILFTGAGDKAFCSGGDQS VRGIGGYVGKDQIPRLNVLDLQRLIRIIPKPVIALVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSNL LARMVGDKKAREIWYLCRQYNAQQALEMGLVNAVVPLERLEDEGVQWAREILEKSPLAIRMLKASINAAADGYAGLQQLA GDATLLYYLTEEAQEGKQAFLEKRKPNFRRFRRYP
Sequences:
>Translated_275_residues MPIEWVKVHDYTDIIYEHDAAGEGIAKITINRPEKRNAFRPETVNELIDAFSRARDDERIGVILFTGAGDKAFCSGGDQS VRGIGGYVGKDQIPRLNVLDLQRLIRIIPKPVIALVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSNL LARMVGDKKAREIWYLCRQYNAQQALEMGLVNAVVPLERLEDEGVQWAREILEKSPLAIRMLKASINAAADGYAGLQQLA GDATLLYYLTEEAQEGKQAFLEKRKPNFRRFRRYP >Mature_274_residues PIEWVKVHDYTDIIYEHDAAGEGIAKITINRPEKRNAFRPETVNELIDAFSRARDDERIGVILFTGAGDKAFCSGGDQSV RGIGGYVGKDQIPRLNVLDLQRLIRIIPKPVIALVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSNLL ARMVGDKKAREIWYLCRQYNAQQALEMGLVNAVVPLERLEDEGVQWAREILEKSPLAIRMLKASINAAADGYAGLQQLAG DATLLYYLTEEAQEGKQAFLEKRKPNFRRFRRYP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=263, Percent_Identity=33.4600760456274, Blast_Score=128, Evalue=6e-30, Organism=Homo sapiens, GI31542718, Length=256, Percent_Identity=32.03125, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI70995211, Length=228, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI45643119, Length=207, Percent_Identity=28.9855072463768, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI260275230, Length=207, Percent_Identity=28.9855072463768, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI260274832, Length=207, Percent_Identity=29.4685990338164, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4502327, Length=258, Percent_Identity=28.6821705426357, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI4757966, Length=225, Percent_Identity=27.5555555555556, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI51538581, Length=225, Percent_Identity=27.5555555555556, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI25453481, Length=225, Percent_Identity=27.5555555555556, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI51538573, Length=225, Percent_Identity=27.5555555555556, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1788597, Length=276, Percent_Identity=65.5797101449275, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI87082183, Length=249, Percent_Identity=32.9317269076305, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1787659, Length=246, Percent_Identity=33.739837398374, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI221142681, Length=262, Percent_Identity=32.4427480916031, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787660, Length=256, Percent_Identity=32.8125, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788682, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25145438, Length=257, Percent_Identity=34.6303501945525, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17554946, Length=251, Percent_Identity=31.8725099601594, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17540714, Length=215, Percent_Identity=30.6976744186047, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17549921, Length=196, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17536985, Length=220, Percent_Identity=28.6363636363636, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17534483, Length=240, Percent_Identity=27.9166666666667, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17560910, Length=244, Percent_Identity=28.6885245901639, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17535521, Length=210, Percent_Identity=26.1904761904762, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI20129971, Length=257, Percent_Identity=34.6303501945525, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24653477, Length=257, Percent_Identity=34.6303501945525, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24653139, Length=271, Percent_Identity=29.520295202952, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI21357171, Length=191, Percent_Identity=31.413612565445, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922422, Length=268, Percent_Identity=24.6268656716418, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24654903, Length=185, Percent_Identity=28.6486486486486, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650670, Length=214, Percent_Identity=28.5046728971963, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 30432; Mature: 30301
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEWVKVHDYTDIIYEHDAAGEGIAKITINRPEKRNAFRPETVNELIDAFSRARDDERI CCCCEEEECCHHHHHEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCE GVILFTGAGDKAFCSGGDQSVRGIGGYVGKDQIPRLNVLDLQRLIRIIPKPVIALVAGYA EEEEEECCCCCCEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHC IGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSNLLARMVGDKKAREIWYLCRQY CCCCCEEEHEEHHEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH NAQQALEMGLVNAVVPLERLEDEGVQWAREILEKSPLAIRMLKASINAAADGYAGLQQLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHC GDATLLYYLTEEAQEGKQAFLEKRKPNFRRFRRYP CCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure PIEWVKVHDYTDIIYEHDAAGEGIAKITINRPEKRNAFRPETVNELIDAFSRARDDERI CCCEEEECCHHHHHEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCE GVILFTGAGDKAFCSGGDQSVRGIGGYVGKDQIPRLNVLDLQRLIRIIPKPVIALVAGYA EEEEEECCCCCCEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHC IGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSNLLARMVGDKKAREIWYLCRQY CCCCCEEEHEEHHEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH NAQQALEMGLVNAVVPLERLEDEGVQWAREILEKSPLAIRMLKASINAAADGYAGLQQLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHC GDATLLYYLTEEAQEGKQAFLEKRKPNFRRFRRYP CCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377 [H]