| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523386
Identifier: 222523386
GI number: 222523386
Start: 103755
End: 104900
Strand: Direct
Name: 222523386
Synonym: Chy400_0087
Alternate gene names: NA
Gene position: 103755-104900 (Clockwise)
Preceding gene: 222523385
Following gene: 222523389
Centisome position: 1.97
GC content: 55.67
Gene sequence:
>1146_bases ATGCCCCGTCTAAATCCAGCCATACATCTAACCTTTTTACTGATTCTGACGTGTTTCGTGCGTTTGCTGGCAAGTATTTT CGCAAACGATATTATCGATGTACGTAATTATCAGCAAGTCGCTGAAGTCATTGATCGCTTTGGCGTATCTGGTCTGTACC GCCACACACCGGACATCTATCCCTACCCACCATTGTGGGCAGGGTTTGAGGTAGCTGCATACTGGCTTGCCCAAAACAAT ATCCTGTCCTTTTCGCTGGCGATCCGTCTGCCGATCATTGCCGCCGATGCGGGCATTGTGGCGGTGATCTGGCAATGGGT GCATCGCCACAGTGGGTCGTCACGGCAAGCAATGCAGGCGGCAATGATCTACGCACTGAATCCGGTGTCGATCATTGTTT CGTGCTGGCACGGCCAGTTCGATGCACTGCCACTGTTCTGGGCAGCGCTGGCAATGATCTGCACCGCCTGGCAGTGGCAG GCCATTGCACTGAGCATTGGGATTGCGCTGAAATCGTTTCCCGTGTTGCTGGTTCCGGCGTTTCTGTGGCACTTGCAGCC GCTACGCCGACAGGTGCAGTTCGGGCTGCTCGCGCTGGTGCCGGTGCTTTTGCTGCTGGCACCGTTTGTTGTCGATGATG CTTCCGCAGTTGTCCGTGAGTTGTTCGGGTATCGTGGGCATGCGTTGCTGGGGATCATGGTGCCGGTACGAACTGTGTAT GTGCCGCTGGTCGGTGAACGTTTTCCGGTGGAAACGACCCGCCTGCTTATTTCGCTGTCGGCGTATGGATTTCTGATCCT GTACGCGCTGACTGTGTGGTCTATGAAGCGTCGGTCAATGAGTGTGCCGATGCAGGCAACGCTGATCGTTTTGCTCTTTT ATGTCGTGTACGCTGGGATCGCGCCGCAGTATCTGCTGTGGGTGTTGCCGTTTATGATTATGGCTGCCCGTCCGGGAGCG GTGCTTGTCTATTCCGCTGTCTCTACGCTGGCTTTACTGGGGTTCTATCTGTACGCAGTGCCCGATATTTTTCCCTTTGC GCTCACCGTCTCACCCCGGCTGGCTCAGGTTGCCTACGGTCTGTTCGGTTCGTTGTGGTGGCTGACTTGCGGCGGTTTGC TGGTGTGGTTCTGGCGGCAGAGGTGA
Upstream 100 bases:
>100_bases ACACAGCAACCGGATGTCCCGCTACAAAACAGAGCGCATTCCAGGGTCAAGTATGCAGTAACATGGATCGTACTCTGGAT TTTTGTGAAATGACACATCC
Downstream 100 bases:
>100_bases GAAGATCAGGTAATGATCAGCCCGAATGACACTGCTCACAATAATAAAGCGGGCAAAGAGAGAACCCTTCGCCCGCCGCT GGCGCCCCCGGTGCGACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPRLNPAIHLTFLLILTCFVRLLASIFANDIIDVRNYQQVAEVIDRFGVSGLYRHTPDIYPYPPLWAGFEVAAYWLAQNN ILSFSLAIRLPIIAADAGIVAVIWQWVHRHSGSSRQAMQAAMIYALNPVSIIVSCWHGQFDALPLFWAALAMICTAWQWQ AIALSIGIALKSFPVLLVPAFLWHLQPLRRQVQFGLLALVPVLLLLAPFVVDDASAVVRELFGYRGHALLGIMVPVRTVY VPLVGERFPVETTRLLISLSAYGFLILYALTVWSMKRRSMSVPMQATLIVLLFYVVYAGIAPQYLLWVLPFMIMAARPGA VLVYSAVSTLALLGFYLYAVPDIFPFALTVSPRLAQVAYGLFGSLWWLTCGGLLVWFWRQR
Sequences:
>Translated_381_residues MPRLNPAIHLTFLLILTCFVRLLASIFANDIIDVRNYQQVAEVIDRFGVSGLYRHTPDIYPYPPLWAGFEVAAYWLAQNN ILSFSLAIRLPIIAADAGIVAVIWQWVHRHSGSSRQAMQAAMIYALNPVSIIVSCWHGQFDALPLFWAALAMICTAWQWQ AIALSIGIALKSFPVLLVPAFLWHLQPLRRQVQFGLLALVPVLLLLAPFVVDDASAVVRELFGYRGHALLGIMVPVRTVY VPLVGERFPVETTRLLISLSAYGFLILYALTVWSMKRRSMSVPMQATLIVLLFYVVYAGIAPQYLLWVLPFMIMAARPGA VLVYSAVSTLALLGFYLYAVPDIFPFALTVSPRLAQVAYGLFGSLWWLTCGGLLVWFWRQR >Mature_380_residues PRLNPAIHLTFLLILTCFVRLLASIFANDIIDVRNYQQVAEVIDRFGVSGLYRHTPDIYPYPPLWAGFEVAAYWLAQNNI LSFSLAIRLPIIAADAGIVAVIWQWVHRHSGSSRQAMQAAMIYALNPVSIIVSCWHGQFDALPLFWAALAMICTAWQWQA IALSIGIALKSFPVLLVPAFLWHLQPLRRQVQFGLLALVPVLLLLAPFVVDDASAVVRELFGYRGHALLGIMVPVRTVYV PLVGERFPVETTRLLISLSAYGFLILYALTVWSMKRRSMSVPMQATLIVLLFYVVYAGIAPQYLLWVLPFMIMAARPGAV LVYSAVSTLALLGFYLYAVPDIFPFALTVSPRLAQVAYGLFGSLWWLTCGGLLVWFWRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42771; Mature: 42639
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLNPAIHLTFLLILTCFVRLLASIFANDIIDVRNYQQVAEVIDRFGVSGLYRHTPDIY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC PYPPLWAGFEVAAYWLAQNNILSFSLAIRLPIIAADAGIVAVIWQWVHRHSGSSRQAMQA CCCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHH AMIYALNPVSIIVSCWHGQFDALPLFWAALAMICTAWQWQAIALSIGIALKSFPVLLVPA HHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLWHLQPLRRQVQFGLLALVPVLLLLAPFVVDDASAVVRELFGYRGHALLGIMVPVRTVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH VPLVGERFPVETTRLLISLSAYGFLILYALTVWSMKRRSMSVPMQATLIVLLFYVVYAGI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC APQYLLWVLPFMIMAARPGAVLVYSAVSTLALLGFYLYAVPDIFPFALTVSPRLAQVAYG CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LFGSLWWLTCGGLLVWFWRQR HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRLNPAIHLTFLLILTCFVRLLASIFANDIIDVRNYQQVAEVIDRFGVSGLYRHTPDIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC PYPPLWAGFEVAAYWLAQNNILSFSLAIRLPIIAADAGIVAVIWQWVHRHSGSSRQAMQA CCCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHH AMIYALNPVSIIVSCWHGQFDALPLFWAALAMICTAWQWQAIALSIGIALKSFPVLLVPA HHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLWHLQPLRRQVQFGLLALVPVLLLLAPFVVDDASAVVRELFGYRGHALLGIMVPVRTVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH VPLVGERFPVETTRLLISLSAYGFLILYALTVWSMKRRSMSVPMQATLIVLLFYVVYAGI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC APQYLLWVLPFMIMAARPGAVLVYSAVSTLALLGFYLYAVPDIFPFALTVSPRLAQVAYG CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LFGSLWWLTCGGLLVWFWRQR HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA