| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523376
Identifier: 222523376
GI number: 222523376
Start: 86673
End: 89462
Strand: Direct
Name: 222523376
Synonym: Chy400_0077
Alternate gene names: NA
Gene position: 86673-89462 (Clockwise)
Preceding gene: 222523375
Following gene: 222523377
Centisome position: 1.64
GC content: 58.49
Gene sequence:
>2790_bases ATGGACGACCTTATCGCCGAACTGATCGACTTGCCCGAAGCGGAGTGGCCGGGTTGGTTGACGACACACGCCAGTCGGTT GTCACTCGAAACGGTTGCCCGACTGAAACAGCGGAGTGATCAATTTATCAAGTCAGATTCGGCCAGGGCTGATCGCATCT CGCGGGCAGCAATTGCTGTCGCCGAACAGCTCCCTACCGAGCCAATCGCAAGGGCACTGGCGTACTGGGCGCGGGGGAAT TGGGCAGTGTATCGCCGCCCGGAAGAGGCCGTTGATCTATACCAGAAGGCTCTCGTGGTCTACGAACAGATCGGTGATAG CGAAGCCATTGCCCGGCTTTCAAGCAATCTGATCCTTGCCTGTACTACGCTTGGCCGTTTCGCAGACGCATTGACCTTTG CCGAACGAGCGCAGCGCCTCCTGGAAGAGATCGCAGCAGGGCCGGTTATCTACCGGGTGAAATTCGGCATGAATTACGGT CTTCTCCTCTACGAATGTGGCCGTTACCAGGAAGCACTGGATGTCAATGAAAAGATGATAGCCCTCGCCCGCAATCATGG TCTACAAGAGGAGTTGGCCGAGCTTCAGGTCAATCAAGCCTTCACCCTGGCTGCAATGGGACGACTGGCGGAGTGTGAGC GACTGCTGATCGACAGTCGGCAGCGTCTGGAACAGCTCACTCCCAAACCTGTGCTCACCATTGCCCGGATCGACCTCAAT CTGGGGGATTATTACAGCGCAACTGCCAACCTGTCGGCTGCATTGAACCACTTTCGGGATGCCAGCAAGGGCTTTCAGGA AGAGAATGTGGCGATGGATTACGCCACCGTCTTGCTCTACGAAGCCAACCTGCTCAAACGGTTGGGTGCCTTGCGCGAGG CGCGCCGGGCCTATGATCGCGCCTATCAGGCGTTTCGCGAAGATAATCTGACCCAATATGCAGCCCAGGCCCTGCTTGCC GGCGCCGCAGTGCGGCGGGAAATCAACCCTGCCGATCCCGAACTGCCAGAGATGCTGAACCGCGCCTGTGATATGTTTAC AAACCTCCAGCTTCCCATCTGGCGCAACGAGACCCTGCTGGAACAGGCCAGGCTGGCATTGCTGTTCGGCAATTATGCCC AGGCCGAATCTCTACTCACGACTGCATGGTCGGAGGATGCGGATACGGTGCTGCACCTCGCGATTGATCATCAGCTTTTG TGGGGTCGTCTGCGCATGGCGCAGGGTGACGAAGCAGGTGCACTGACTGCCTTCACTTCCGCGCTGACCCAAAGCCAGAA CGGTGCCCAAATCTGGTCTGAACGTGAGGCGCTGGTTGCGCTCGGCAATCTGTTGGCTGCGCGTCAGCCCGATAGCGCCA TCCAATATCTTCAGGATGCTGTTCGCATTGACGAGCTGATGCGCGCGGAATTGAGTGTGGCCGAATTGACCGCAGATTTT CAGTCACGGCGGAATGACGCGCTGCCCCTGCTGGCAAAACTCGAATGGCAGGCCGGGCATTTCCAGACAGCACTCCAGAC CGTCTGGCGCTGGAAAGGCGGGGCACTGATTGATCTGATCCGTCGTCACGATGGCTACACTGACGTCAACCCAACGATTG CCCAACTCCAGCAACGGATTGCCGTGCTGCGCTGGGAGCTGGAGCGCAAACAACGCGATGAAGAGAGCGAGGAGCGACTG GACGAACTGCGCAGGCAGATTCGCGACCTGGAAGCGCAGGCGTATCACGAACGCCGCTATCATATCCACAAGCCAGGTCA ATCGGATGCGTCGATCTACAACTGGCAAACGGTGCTGAGCAAGCTGGATGCCGACTGTTTGATTGAATACGTCAGTATTG ACAACGAACTATACGCATGGTGTCTCACCCGCAACGGTGATTGCACCATCACCACGCTCGGTTCGACATCGACCATCAGT GAACTGTTACAGCGGCTCGAACTCAAAAACCTGAACGCACTCCGCCTCAACGACGAACAGCGCCAGCAACGGGGTGAAAC GCTGATTCGCGATGCCAGGGTGCTTTTGCAACGGCTGTACCGCACCCTGATCGAGCCACTCCCGATCCCGGTTGAAGGCA AACTGCTCATCGCCCCCTGCGCACCTATCCATCTGGCACCCTTTGCCGCGCTGTGGAACGGCAACAACTACCTGATGGAA CGGTATCTGATCGAGCAGATTCCGACTGGTGCGTTGCTTGGTATACCAGTACCGGCAGGCCCATCAGGCCCGGCGCTCGT CATCGGCGCGTCGGCAGACGGTATGCTCGCCGCCGTGCAGAGAGAAATCAACGCGATTGCCGGCATCCTGGCCGACGCTG AGGTCTATCTGGATGATCCGGCAGCACTTACTGCGCTGCACAACCTGACCACAGCGCCACGCATTCTCCATTTCAGTGCG CATACCACGTTCGACGAAGAACCGACCATCTTCGCCGGTTTACACCTGGCCGACCGCACCTTCACCATCGAAGAATGCTA CCGGCTGAACCTGGCCGGCACCGAACTGGTTACGCTCAACGGATGTACCACCGCTTACGGTATGGAGAGCGGTGGTGCGC TGATCGCGTTCCAATCAGCCTTCCTGATTGCCGGCGCGCAACGCTTGCTCGTCAGCCTGTGGCCAATCAAAGACGAACCT GCCGCGGGTTTGATGGCTCGCTTCTACCAGAACCTGATGCAAACGCAGTCACCGGCAGTGGCGCTGCGCCAGACCCAACG CGATCTGTTACACGACCCGGCGCTGGCCCACCCGGCGATCTGGTCGGCGTTTGCGGTGATGAGGCGGTAG
Upstream 100 bases:
>100_bases TTCGTCATCCGCGATCTACCGCCAGGGACATACCGCCTCACCGTGTACACACCCGACAAAGAGATCGTCATTCGCTCACT CCAGATAGGGAACGACTGAG
Downstream 100 bases:
>100_bases GTGCGTAGTGCGAAACACCATTTGTTGTATGTCAATATAACTGCCCCATGCCCACCCCCCACTCACCTCACCCACATCCC AACCCACCGCCCGCCCTGCT
Product: tetratricopeptide repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein; Filamentous Haemagglutinin Outer Membrane Protein; Haemagglutination Activity Domain Protein; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Tetratricopeptide-Repeat Containing Protein; Kinesin Light Chain; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; WD-40 Repeat-Containing Protein; Peptidase Domain-Containing Protein; Tetratricopeptide Domain Protein; Peptidase Domain Protein; Sel1 Domain-Containing Protein; Peptidase-Like; TPR Domain-Containing Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 929; Mature: 929
Protein sequence:
>929_residues MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAVAEQLPTEPIARALAYWARGN WAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILACTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYG LLLYECGRYQEALDVNEKMIALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDRAYQAFREDNLTQYAAQALLA GAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLLEQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLL WGRLRMAQGDEAGALTAFTSALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRIAVLRWELERKQRDEESEERL DELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLSKLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTIS ELLQRLELKNLNALRLNDEQRQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDPAALTALHNLTTAPRILHFSA HTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLNGCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEP AAGLMARFYQNLMQTQSPAVALRQTQRDLLHDPALAHPAIWSAFAVMRR
Sequences:
>Translated_929_residues MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAVAEQLPTEPIARALAYWARGN WAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILACTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYG LLLYECGRYQEALDVNEKMIALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDRAYQAFREDNLTQYAAQALLA GAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLLEQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLL WGRLRMAQGDEAGALTAFTSALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRIAVLRWELERKQRDEESEERL DELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLSKLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTIS ELLQRLELKNLNALRLNDEQRQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDPAALTALHNLTTAPRILHFSA HTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLNGCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEP AAGLMARFYQNLMQTQSPAVALRQTQRDLLHDPALAHPAIWSAFAVMRR >Mature_929_residues MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAVAEQLPTEPIARALAYWARGN WAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILACTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYG LLLYECGRYQEALDVNEKMIALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDRAYQAFREDNLTQYAAQALLA GAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLLEQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLL WGRLRMAQGDEAGALTAFTSALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRIAVLRWELERKQRDEESEERL DELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLSKLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTIS ELLQRLELKNLNALRLNDEQRQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDPAALTALHNLTTAPRILHFSA HTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLNGCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEP AAGLMARFYQNLMQTQSPAVALRQTQRDLLHDPALAHPAIWSAFAVMRR
Specific function: Unknown
COG id: COG4995
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104033; Mature: 104033
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAV CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AEQLPTEPIARALAYWARGNWAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILA HHHCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEE CTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYGLLLYECGRYQEALDVNEKMI EHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCHHHHHCCHHHHH ALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDR CCCCHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYQAFREDNLTQYAAQALLAGAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLL HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH EQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLLWGRLRMAQGDEAGALTAFTS HHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH ALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRI HHCCCCCCCCHHEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH AVLRWELERKQRDEESEERLDELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHH KLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTISELLQRLELKNLNALRLNDEQ HCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCHHH RQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCHHHHCCCCHHHHH RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDP HHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEECCH AALTALHNLTTAPRILHFSAHTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLN HHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHHEECCCCCEEEEEC GCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEPAAGLMARFYQNLMQTQSPAV CCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH ALRQTQRDLLHDPALAHPAIWSAFAVMRR HHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAV CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AEQLPTEPIARALAYWARGNWAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILA HHHCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEE CTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYGLLLYECGRYQEALDVNEKMI EHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCHHHHHCCHHHHH ALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDR CCCCHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYQAFREDNLTQYAAQALLAGAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLL HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH EQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLLWGRLRMAQGDEAGALTAFTS HHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH ALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRI HHCCCCCCCCHHEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH AVLRWELERKQRDEESEERLDELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHH KLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTISELLQRLELKNLNALRLNDEQ HCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCHHH RQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCHHHHCCCCHHHHH RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDP HHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEECCH AALTALHNLTTAPRILHFSAHTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLN HHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHHEECCCCCEEEEEC GCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEPAAGLMARFYQNLMQTQSPAV CCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH ALRQTQRDLLHDPALAHPAIWSAFAVMRR HHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA