The gene/protein map for NC_012032 is currently unavailable.
Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523376

Identifier: 222523376

GI number: 222523376

Start: 86673

End: 89462

Strand: Direct

Name: 222523376

Synonym: Chy400_0077

Alternate gene names: NA

Gene position: 86673-89462 (Clockwise)

Preceding gene: 222523375

Following gene: 222523377

Centisome position: 1.64

GC content: 58.49

Gene sequence:

>2790_bases
ATGGACGACCTTATCGCCGAACTGATCGACTTGCCCGAAGCGGAGTGGCCGGGTTGGTTGACGACACACGCCAGTCGGTT
GTCACTCGAAACGGTTGCCCGACTGAAACAGCGGAGTGATCAATTTATCAAGTCAGATTCGGCCAGGGCTGATCGCATCT
CGCGGGCAGCAATTGCTGTCGCCGAACAGCTCCCTACCGAGCCAATCGCAAGGGCACTGGCGTACTGGGCGCGGGGGAAT
TGGGCAGTGTATCGCCGCCCGGAAGAGGCCGTTGATCTATACCAGAAGGCTCTCGTGGTCTACGAACAGATCGGTGATAG
CGAAGCCATTGCCCGGCTTTCAAGCAATCTGATCCTTGCCTGTACTACGCTTGGCCGTTTCGCAGACGCATTGACCTTTG
CCGAACGAGCGCAGCGCCTCCTGGAAGAGATCGCAGCAGGGCCGGTTATCTACCGGGTGAAATTCGGCATGAATTACGGT
CTTCTCCTCTACGAATGTGGCCGTTACCAGGAAGCACTGGATGTCAATGAAAAGATGATAGCCCTCGCCCGCAATCATGG
TCTACAAGAGGAGTTGGCCGAGCTTCAGGTCAATCAAGCCTTCACCCTGGCTGCAATGGGACGACTGGCGGAGTGTGAGC
GACTGCTGATCGACAGTCGGCAGCGTCTGGAACAGCTCACTCCCAAACCTGTGCTCACCATTGCCCGGATCGACCTCAAT
CTGGGGGATTATTACAGCGCAACTGCCAACCTGTCGGCTGCATTGAACCACTTTCGGGATGCCAGCAAGGGCTTTCAGGA
AGAGAATGTGGCGATGGATTACGCCACCGTCTTGCTCTACGAAGCCAACCTGCTCAAACGGTTGGGTGCCTTGCGCGAGG
CGCGCCGGGCCTATGATCGCGCCTATCAGGCGTTTCGCGAAGATAATCTGACCCAATATGCAGCCCAGGCCCTGCTTGCC
GGCGCCGCAGTGCGGCGGGAAATCAACCCTGCCGATCCCGAACTGCCAGAGATGCTGAACCGCGCCTGTGATATGTTTAC
AAACCTCCAGCTTCCCATCTGGCGCAACGAGACCCTGCTGGAACAGGCCAGGCTGGCATTGCTGTTCGGCAATTATGCCC
AGGCCGAATCTCTACTCACGACTGCATGGTCGGAGGATGCGGATACGGTGCTGCACCTCGCGATTGATCATCAGCTTTTG
TGGGGTCGTCTGCGCATGGCGCAGGGTGACGAAGCAGGTGCACTGACTGCCTTCACTTCCGCGCTGACCCAAAGCCAGAA
CGGTGCCCAAATCTGGTCTGAACGTGAGGCGCTGGTTGCGCTCGGCAATCTGTTGGCTGCGCGTCAGCCCGATAGCGCCA
TCCAATATCTTCAGGATGCTGTTCGCATTGACGAGCTGATGCGCGCGGAATTGAGTGTGGCCGAATTGACCGCAGATTTT
CAGTCACGGCGGAATGACGCGCTGCCCCTGCTGGCAAAACTCGAATGGCAGGCCGGGCATTTCCAGACAGCACTCCAGAC
CGTCTGGCGCTGGAAAGGCGGGGCACTGATTGATCTGATCCGTCGTCACGATGGCTACACTGACGTCAACCCAACGATTG
CCCAACTCCAGCAACGGATTGCCGTGCTGCGCTGGGAGCTGGAGCGCAAACAACGCGATGAAGAGAGCGAGGAGCGACTG
GACGAACTGCGCAGGCAGATTCGCGACCTGGAAGCGCAGGCGTATCACGAACGCCGCTATCATATCCACAAGCCAGGTCA
ATCGGATGCGTCGATCTACAACTGGCAAACGGTGCTGAGCAAGCTGGATGCCGACTGTTTGATTGAATACGTCAGTATTG
ACAACGAACTATACGCATGGTGTCTCACCCGCAACGGTGATTGCACCATCACCACGCTCGGTTCGACATCGACCATCAGT
GAACTGTTACAGCGGCTCGAACTCAAAAACCTGAACGCACTCCGCCTCAACGACGAACAGCGCCAGCAACGGGGTGAAAC
GCTGATTCGCGATGCCAGGGTGCTTTTGCAACGGCTGTACCGCACCCTGATCGAGCCACTCCCGATCCCGGTTGAAGGCA
AACTGCTCATCGCCCCCTGCGCACCTATCCATCTGGCACCCTTTGCCGCGCTGTGGAACGGCAACAACTACCTGATGGAA
CGGTATCTGATCGAGCAGATTCCGACTGGTGCGTTGCTTGGTATACCAGTACCGGCAGGCCCATCAGGCCCGGCGCTCGT
CATCGGCGCGTCGGCAGACGGTATGCTCGCCGCCGTGCAGAGAGAAATCAACGCGATTGCCGGCATCCTGGCCGACGCTG
AGGTCTATCTGGATGATCCGGCAGCACTTACTGCGCTGCACAACCTGACCACAGCGCCACGCATTCTCCATTTCAGTGCG
CATACCACGTTCGACGAAGAACCGACCATCTTCGCCGGTTTACACCTGGCCGACCGCACCTTCACCATCGAAGAATGCTA
CCGGCTGAACCTGGCCGGCACCGAACTGGTTACGCTCAACGGATGTACCACCGCTTACGGTATGGAGAGCGGTGGTGCGC
TGATCGCGTTCCAATCAGCCTTCCTGATTGCCGGCGCGCAACGCTTGCTCGTCAGCCTGTGGCCAATCAAAGACGAACCT
GCCGCGGGTTTGATGGCTCGCTTCTACCAGAACCTGATGCAAACGCAGTCACCGGCAGTGGCGCTGCGCCAGACCCAACG
CGATCTGTTACACGACCCGGCGCTGGCCCACCCGGCGATCTGGTCGGCGTTTGCGGTGATGAGGCGGTAG

Upstream 100 bases:

>100_bases
TTCGTCATCCGCGATCTACCGCCAGGGACATACCGCCTCACCGTGTACACACCCGACAAAGAGATCGTCATTCGCTCACT
CCAGATAGGGAACGACTGAG

Downstream 100 bases:

>100_bases
GTGCGTAGTGCGAAACACCATTTGTTGTATGTCAATATAACTGCCCCATGCCCACCCCCCACTCACCTCACCCACATCCC
AACCCACCGCCCGCCCTGCT

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein; Filamentous Haemagglutinin Outer Membrane Protein; Haemagglutination Activity Domain Protein; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Tetratricopeptide-Repeat Containing Protein; Kinesin Light Chain; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; WD-40 Repeat-Containing Protein; Peptidase Domain-Containing Protein; Tetratricopeptide Domain Protein; Peptidase Domain Protein; Sel1 Domain-Containing Protein; Peptidase-Like; TPR Domain-Containing Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 929; Mature: 929

Protein sequence:

>929_residues
MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAVAEQLPTEPIARALAYWARGN
WAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILACTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYG
LLLYECGRYQEALDVNEKMIALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN
LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDRAYQAFREDNLTQYAAQALLA
GAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLLEQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLL
WGRLRMAQGDEAGALTAFTSALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF
QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRIAVLRWELERKQRDEESEERL
DELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLSKLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTIS
ELLQRLELKNLNALRLNDEQRQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME
RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDPAALTALHNLTTAPRILHFSA
HTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLNGCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEP
AAGLMARFYQNLMQTQSPAVALRQTQRDLLHDPALAHPAIWSAFAVMRR

Sequences:

>Translated_929_residues
MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAVAEQLPTEPIARALAYWARGN
WAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILACTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYG
LLLYECGRYQEALDVNEKMIALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN
LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDRAYQAFREDNLTQYAAQALLA
GAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLLEQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLL
WGRLRMAQGDEAGALTAFTSALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF
QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRIAVLRWELERKQRDEESEERL
DELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLSKLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTIS
ELLQRLELKNLNALRLNDEQRQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME
RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDPAALTALHNLTTAPRILHFSA
HTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLNGCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEP
AAGLMARFYQNLMQTQSPAVALRQTQRDLLHDPALAHPAIWSAFAVMRR
>Mature_929_residues
MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAVAEQLPTEPIARALAYWARGN
WAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILACTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYG
LLLYECGRYQEALDVNEKMIALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN
LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDRAYQAFREDNLTQYAAQALLA
GAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLLEQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLL
WGRLRMAQGDEAGALTAFTSALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF
QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRIAVLRWELERKQRDEESEERL
DELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLSKLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTIS
ELLQRLELKNLNALRLNDEQRQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME
RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDPAALTALHNLTTAPRILHFSA
HTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLNGCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEP
AAGLMARFYQNLMQTQSPAVALRQTQRDLLHDPALAHPAIWSAFAVMRR

Specific function: Unknown

COG id: COG4995

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104033; Mature: 104033

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAV
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AEQLPTEPIARALAYWARGNWAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILA
HHHCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEE
CTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYGLLLYECGRYQEALDVNEKMI
EHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCHHHHHCCHHHHH
ALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN
HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDR
CCCCHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQAFREDNLTQYAAQALLAGAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLL
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH
EQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLLWGRLRMAQGDEAGALTAFTS
HHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRI
HHCCCCCCCCHHEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
AVLRWELERKQRDEESEERLDELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHH
KLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTISELLQRLELKNLNALRLNDEQ
HCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCHHH
RQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCHHHHCCCCHHHHH
RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDP
HHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEECCH
AALTALHNLTTAPRILHFSAHTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLN
HHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHHEECCCCCEEEEEC
GCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEPAAGLMARFYQNLMQTQSPAV
CCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH
ALRQTQRDLLHDPALAHPAIWSAFAVMRR
HHHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDDLIAELIDLPEAEWPGWLTTHASRLSLETVARLKQRSDQFIKSDSARADRISRAAIAV
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AEQLPTEPIARALAYWARGNWAVYRRPEEAVDLYQKALVVYEQIGDSEAIARLSSNLILA
HHHCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEE
CTTLGRFADALTFAERAQRLLEEIAAGPVIYRVKFGMNYGLLLYECGRYQEALDVNEKMI
EHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCHHHHHCCHHHHH
ALARNHGLQEELAELQVNQAFTLAAMGRLAECERLLIDSRQRLEQLTPKPVLTIARIDLN
HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
LGDYYSATANLSAALNHFRDASKGFQEENVAMDYATVLLYEANLLKRLGALREARRAYDR
CCCCHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYQAFREDNLTQYAAQALLAGAAVRREINPADPELPEMLNRACDMFTNLQLPIWRNETLL
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH
EQARLALLFGNYAQAESLLTTAWSEDADTVLHLAIDHQLLWGRLRMAQGDEAGALTAFTS
HHHHHHHHHCCHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ALTQSQNGAQIWSEREALVALGNLLAARQPDSAIQYLQDAVRIDELMRAELSVAELTADF
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRRNDALPLLAKLEWQAGHFQTALQTVWRWKGGALIDLIRRHDGYTDVNPTIAQLQQRI
HHCCCCCCCCHHEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
AVLRWELERKQRDEESEERLDELRRQIRDLEAQAYHERRYHIHKPGQSDASIYNWQTVLS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHH
KLDADCLIEYVSIDNELYAWCLTRNGDCTITTLGSTSTISELLQRLELKNLNALRLNDEQ
HCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCHHH
RQQRGETLIRDARVLLQRLYRTLIEPLPIPVEGKLLIAPCAPIHLAPFAALWNGNNYLME
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCHHHHCCCCHHHHH
RYLIEQIPTGALLGIPVPAGPSGPALVIGASADGMLAAVQREINAIAGILADAEVYLDDP
HHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEECCH
AALTALHNLTTAPRILHFSAHTTFDEEPTIFAGLHLADRTFTIEECYRLNLAGTELVTLN
HHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHHEECCCCCEEEEEC
GCTTAYGMESGGALIAFQSAFLIAGAQRLLVSLWPIKDEPAAGLMARFYQNLMQTQSPAV
CCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHH
ALRQTQRDLLHDPALAHPAIWSAFAVMRR
HHHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA