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The map label for this gene is 222523375

Identifier: 222523375

GI number: 222523375

Start: 85193

End: 86671

Strand: Direct

Name: 222523375

Synonym: Chy400_0076

Alternate gene names: NA

Gene position: 85193-86671 (Clockwise)

Preceding gene: 222523369

Following gene: 222523376

Centisome position: 1.62

GC content: 52.54

Gene sequence:

>1479_bases
ATGACCACCTCTCACCTGCCGCTTGACCACCTTGTACGCTGCTGCAAGCAAGAACGCCAGTCGTATCGCGATTCCGGTGA
ACTAGCGTCACCATGTTGTATGCACTTATTTCGCCGCGCTTTTGCCGGCGAGCAAGAGGCATGGGGCTACGTCATCGACA
TTTTTCAGCCGCTCATTGACTCCTGGCTGCGACGGGTACGTGGTACCCGCCTGGATTTCATTGACGATGATGACTTGACG
GCAGTCGCTCATGACGCACTCCTCAAGCTGCGCGACAGCGCCAACCGGTTACCAGAATTAACGACTGGGGATGACTTGAG
TCGGCTCCTCGCTTACCTGAAGAGGTGTGCTATAAGAGAAGTGCAAACACTGTTTCGGCGTCGTAACCGATCAAGAGAAA
TTTCGTATATCAAAGACGATACTCCGCATGTAGCACATTTTCTCGACGCTGAGACAAGAATAACGCTCTACCAGCGTCTG
CGAGAGGTGTTGAACGAGGATGAACTCTTCGTTATTGAACATCTCTTTTTCAAAGGGTATAAACCACAAGACATTATTCA
CTATTTTTCCGAACGATTTGTGGATGTTGATCATATTTATCAGATCAGACAGAATGCTCTGCGCCGTTTACGCAATGATC
CGGTGATTCGTGATCTCGTCTTTCCCCAGGAACAATCGAGCGATCATCGTGATCCACCGATAGACTCGCCGCAAGATCGT
CGCCAAAAACCGCGTGGACCAGATTCTCTTAAGATAGAGTTGGATCAAGAACAAAAGGAACCAGGGCTTATGGGTACTCC
TTGCACACTCGACGAACAGATTCTGCTCGATTACGCTGCCGGACGATTATCGGTAGAGCAGCGTCTGCTTGTTGAAGCCA
ATCCTGATTGTGTGGCACAGGCGCAGCGACTGGCGGCTGAAATAGCGGCGATTGAGGCTAGCCTGTACCGTTTACAGTGT
CCTGATGTTGACACCCTTCACGCCTACTACTATCGCGAACTGGAAGCGACGCAACACCTGATTGTTCATCGGCATGTCGA
AGACTGTTTGTTCTGCCGGGAAGAGCTTGCACTATTGCAGGTGATGGACGAAACACCATTGATCGAACCATCGCCATTCG
AGCGTGTCCGCCAGGTCGTCGAGGCAATCCTGCAACCGGCGCTGGCCTTGCAACTGCGTGGACAGGCACTCATCTATGCA
GCGCCGGAGGTTCTGCTTACCCTGACGGTGCGCCGCACCAAACAGGGGGTGCCACAATGGACGGTCATCGGTGAGCTGAA
AATGCCCGATGGCGCTCCTACAGATCAACCCATCGAGCAGGTGGTTGCAACCGTTACCGACTCGCACACGATTACTGCTG
AAATCGATGAGGATGGCGTCTTCGTCATCCGCGATCTACCGCCAGGGACATACCGCCTCACCGTGTACACACCCGACAAA
GAGATCGTCATTCGCTCACTCCAGATAGGGAACGACTGA

Upstream 100 bases:

>100_bases
ACTGGTGTAAAGATTATCCTCGATTCCGCCTGTACAGAAACCGCTGCGACACTGAACAGCCGCGTGTTGCCGTGCATGCA
TTGTGCTGATGAGGGCTGCA

Downstream 100 bases:

>100_bases
GATGGACGACCTTATCGCCGAACTGATCGACTTGCCCGAAGCGGAGTGGCCGGGTTGGTTGACGACACACGCCAGTCGGT
TGTCACTCGAAACGGTTGCC

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MTTSHLPLDHLVRCCKQERQSYRDSGELASPCCMHLFRRAFAGEQEAWGYVIDIFQPLIDSWLRRVRGTRLDFIDDDDLT
AVAHDALLKLRDSANRLPELTTGDDLSRLLAYLKRCAIREVQTLFRRRNRSREISYIKDDTPHVAHFLDAETRITLYQRL
REVLNEDELFVIEHLFFKGYKPQDIIHYFSERFVDVDHIYQIRQNALRRLRNDPVIRDLVFPQEQSSDHRDPPIDSPQDR
RQKPRGPDSLKIELDQEQKEPGLMGTPCTLDEQILLDYAAGRLSVEQRLLVEANPDCVAQAQRLAAEIAAIEASLYRLQC
PDVDTLHAYYYRELEATQHLIVHRHVEDCLFCREELALLQVMDETPLIEPSPFERVRQVVEAILQPALALQLRGQALIYA
APEVLLTLTVRRTKQGVPQWTVIGELKMPDGAPTDQPIEQVVATVTDSHTITAEIDEDGVFVIRDLPPGTYRLTVYTPDK
EIVIRSLQIGND

Sequences:

>Translated_492_residues
MTTSHLPLDHLVRCCKQERQSYRDSGELASPCCMHLFRRAFAGEQEAWGYVIDIFQPLIDSWLRRVRGTRLDFIDDDDLT
AVAHDALLKLRDSANRLPELTTGDDLSRLLAYLKRCAIREVQTLFRRRNRSREISYIKDDTPHVAHFLDAETRITLYQRL
REVLNEDELFVIEHLFFKGYKPQDIIHYFSERFVDVDHIYQIRQNALRRLRNDPVIRDLVFPQEQSSDHRDPPIDSPQDR
RQKPRGPDSLKIELDQEQKEPGLMGTPCTLDEQILLDYAAGRLSVEQRLLVEANPDCVAQAQRLAAEIAAIEASLYRLQC
PDVDTLHAYYYRELEATQHLIVHRHVEDCLFCREELALLQVMDETPLIEPSPFERVRQVVEAILQPALALQLRGQALIYA
APEVLLTLTVRRTKQGVPQWTVIGELKMPDGAPTDQPIEQVVATVTDSHTITAEIDEDGVFVIRDLPPGTYRLTVYTPDK
EIVIRSLQIGND
>Mature_491_residues
TTSHLPLDHLVRCCKQERQSYRDSGELASPCCMHLFRRAFAGEQEAWGYVIDIFQPLIDSWLRRVRGTRLDFIDDDDLTA
VAHDALLKLRDSANRLPELTTGDDLSRLLAYLKRCAIREVQTLFRRRNRSREISYIKDDTPHVAHFLDAETRITLYQRLR
EVLNEDELFVIEHLFFKGYKPQDIIHYFSERFVDVDHIYQIRQNALRRLRNDPVIRDLVFPQEQSSDHRDPPIDSPQDRR
QKPRGPDSLKIELDQEQKEPGLMGTPCTLDEQILLDYAAGRLSVEQRLLVEANPDCVAQAQRLAAEIAAIEASLYRLQCP
DVDTLHAYYYRELEATQHLIVHRHVEDCLFCREELALLQVMDETPLIEPSPFERVRQVVEAILQPALALQLRGQALIYAA
PEVLLTLTVRRTKQGVPQWTVIGELKMPDGAPTDQPIEQVVATVTDSHTITAEIDEDGVFVIRDLPPGTYRLTVYTPDKE
IVIRSLQIGND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56743; Mature: 56612

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHEEHHCCCCC
>Mature Secondary Structure 
TTSHLPLDHLVRCCKQERQSYRDSGELASPCCMHLFRRAFAGEQEAWGYVIDIFQPLID
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SWLRRVRGTRLDFIDDDDLTAVAHDALLKLRDSANRLPELTTGDDLSRLLAYLKRCAIRE
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
VQTLFRRRNRSREISYIKDDTPHVAHFLDAETRITLYQRLREVLNEDELFVIEHLFFKGY
HHHHHHHCCCCCCCCEECCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCC
KPQDIIHYFSERFVDVDHIYQIRQNALRRLRNDPVIRDLVFPQEQSSDHRDPPIDSPQDR
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHH
RQKPRGPDSLKIELDQEQKEPGLMGTPCTLDEQILLDYAAGRLSVEQRLLVEANPDCVAQ
HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHCHHHHHEEECCCHHHHH
AQRLAAEIAAIEASLYRLQCPDVDTLHAYYYRELEATQHLIVHRHVEDCLFCREELALLQ
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMDETPLIEPSPFERVRQVVEAILQPALALQLRGQALIYAAPEVLLTLTVRRTKQGVPQW
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCE
TVIGELKMPDGAPTDQPIEQVVATVTDSHTITAEIDEDGVFVIRDLPPGTYRLTVYTPDK
EEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCH
EIVIRSLQIGND
HHHEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA