| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523351
Identifier: 222523351
GI number: 222523351
Start: 54870
End: 56252
Strand: Direct
Name: 222523351
Synonym: Chy400_0052
Alternate gene names: NA
Gene position: 54870-56252 (Clockwise)
Preceding gene: 222523350
Following gene: 222523352
Centisome position: 1.04
GC content: 58.5
Gene sequence:
>1383_bases ATGACCCTCGCCCAGGCAATTGCCGACTATCACGCTTTGCTTGAACCGACGCTGGCGGTCGAGTCGTGGCAGCGACTAAC CGCAGAGATGCGTGCTCGCCGGCTGTATTTTGGTGAACGGCCACTGGCAACCGTCCTCCGGCCACGCCTGATCACCGCCT CGCAGTATGAACTTCTCCGTCGTGGAACGCAGCAGGTTGCTGAAGCGGCACGTGCCATTGTAGCGGCTGCCCTCGACTCG TCGGAAGCCGGCCAGGCCGTGCGTGAAGTATTGATGCTCACGCCCCTTGAAGAACGTCTGATCGAGATGCATCCGGGCTA TCTCGAACCGAGTGCTCATTCGCGGATGGACACCTTCCTGACCGTGGATGGGTCATCGTTGCAGTTTGTCGAGTACAACG CCGAGAGTCCGGCGGCAATTGCCTATGAAGATCTGCTGGCGCAGGCATTTCTGGCGATGCCGGTGATGCAAGAATTTGCC AAACGCTATCCAATTCTGCCCTTACCGGCTCGCCAGTATCTATTGCGCACATTGCTCGATTGCTGGCGAGCGGCGGGCAG CCCCGGTCACGAGCCACAAGTGGCTATTGTTGACTGGCACGGTGTACCAACAGCGACCGAGTTCGAGATGTTTCGCCAGT ATTTTGTTGAGCACGGCCTGCCAGCCGTCATATGTGCCCCCCAGGACCTCAGCTTCCGCGATGGTCAATTGCTGGCCCCC ACCCCTGATGGTGGTGAAATGCCGGTCACCATTGTGTTCAAGCGGGTGCTAACCAGCGAATTCCTTACTCACTACGGTGA AGAGGCACTATCCCATCCGCTGGTACAGGCGTATGCTGCCGGTGCCTGCGTGATTGTCAATTCATTCCGGGCCAAACTGC TGCACAAAAAATCGCTCTTTGCACTGCTATCCGACGAGCGCTTCCACGATCCGTTGAGCGCTGATCAGCGGGCAGCAGTG GCGGCCCACGTGCCCTGGACGCGCGTCGTGCGACCGGGAACAACCACGTACCAGGGCGAACAGATCGATCTCCTATCCTT CGCGCGTGCCAATCGCGAACGGTTGTTGTTGAAGCCGAACGATGAATATGGTGGCAAAGGGATTACGATTGGCTGGGAGG TCAGCGCCGACGAATGGGATGCCGCCCTGCAAGCGGCACTCAGCTCGCCGTTTGTGGTGCAAGAGCGGGTGACTATCGCC TACGAGCCGTACCCCGCCTTGATCGATGGCAAAGTGGTGATTGGCGAGCGTCTGGTTGATAGTGATCCCTTCCTGTTCGG AACAGAGGTGAATGGCTGTTTGTGCCGCCTCTCAACTGTGACGCTGTTGAATGTGACTGCCGGCGGCGGCAGTACCGTTC CGGTCTTCATCATTGACGAGTAA
Upstream 100 bases:
>100_bases GGCGGCGCACGACACGGAAGAAGACAGCCGAAGAGCCATCATAATTGCAGCGTGCGTTAATGTGTTGTGCCAGAACGATC ATCAATAGAGGTGTGAAATT
Downstream 100 bases:
>100_bases ACGCAACGCAGGAGTCGGTGATGCTGGTCTACGACGCGCTTGGCCGGGAGATCGAGCTGGCAGGAACACCACAACGAATC GTGTCGCTTGTGCCGAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTLAQAIADYHALLEPTLAVESWQRLTAEMRARRLYFGERPLATVLRPRLITASQYELLRRGTQQVAEAARAIVAAALDS SEAGQAVREVLMLTPLEERLIEMHPGYLEPSAHSRMDTFLTVDGSSLQFVEYNAESPAAIAYEDLLAQAFLAMPVMQEFA KRYPILPLPARQYLLRTLLDCWRAAGSPGHEPQVAIVDWHGVPTATEFEMFRQYFVEHGLPAVICAPQDLSFRDGQLLAP TPDGGEMPVTIVFKRVLTSEFLTHYGEEALSHPLVQAYAAGACVIVNSFRAKLLHKKSLFALLSDERFHDPLSADQRAAV AAHVPWTRVVRPGTTTYQGEQIDLLSFARANRERLLLKPNDEYGGKGITIGWEVSADEWDAALQAALSSPFVVQERVTIA YEPYPALIDGKVVIGERLVDSDPFLFGTEVNGCLCRLSTVTLLNVTAGGGSTVPVFIIDE
Sequences:
>Translated_460_residues MTLAQAIADYHALLEPTLAVESWQRLTAEMRARRLYFGERPLATVLRPRLITASQYELLRRGTQQVAEAARAIVAAALDS SEAGQAVREVLMLTPLEERLIEMHPGYLEPSAHSRMDTFLTVDGSSLQFVEYNAESPAAIAYEDLLAQAFLAMPVMQEFA KRYPILPLPARQYLLRTLLDCWRAAGSPGHEPQVAIVDWHGVPTATEFEMFRQYFVEHGLPAVICAPQDLSFRDGQLLAP TPDGGEMPVTIVFKRVLTSEFLTHYGEEALSHPLVQAYAAGACVIVNSFRAKLLHKKSLFALLSDERFHDPLSADQRAAV AAHVPWTRVVRPGTTTYQGEQIDLLSFARANRERLLLKPNDEYGGKGITIGWEVSADEWDAALQAALSSPFVVQERVTIA YEPYPALIDGKVVIGERLVDSDPFLFGTEVNGCLCRLSTVTLLNVTAGGGSTVPVFIIDE >Mature_459_residues TLAQAIADYHALLEPTLAVESWQRLTAEMRARRLYFGERPLATVLRPRLITASQYELLRRGTQQVAEAARAIVAAALDSS EAGQAVREVLMLTPLEERLIEMHPGYLEPSAHSRMDTFLTVDGSSLQFVEYNAESPAAIAYEDLLAQAFLAMPVMQEFAK RYPILPLPARQYLLRTLLDCWRAAGSPGHEPQVAIVDWHGVPTATEFEMFRQYFVEHGLPAVICAPQDLSFRDGQLLAPT PDGGEMPVTIVFKRVLTSEFLTHYGEEALSHPLVQAYAAGACVIVNSFRAKLLHKKSLFALLSDERFHDPLSADQRAAVA AHVPWTRVVRPGTTTYQGEQIDLLSFARANRERLLLKPNDEYGGKGITIGWEVSADEWDAALQAALSSPFVVQERVTIAY EPYPALIDGKVVIGERLVDSDPFLFGTEVNGCLCRLSTVTLLNVTAGGGSTVPVFIIDE
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50806; Mature: 50674
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAQAIADYHALLEPTLAVESWQRLTAEMRARRLYFGERPLATVLRPRLITASQYELLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHCCHHHHHHHH RGTQQVAEAARAIVAAALDSSEAGQAVREVLMLTPLEERLIEMHPGYLEPSAHSRMDTFL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEE TVDGSSLQFVEYNAESPAAIAYEDLLAQAFLAMPVMQEFAKRYPILPLPARQYLLRTLLD EECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH CWRAAGSPGHEPQVAIVDWHGVPTATEFEMFRQYFVEHGLPAVICAPQDLSFRDGQLLAP HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECC TPDGGEMPVTIVFKRVLTSEFLTHYGEEALSHPLVQAYAAGACVIVNSFRAKLLHKKSLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH ALLSDERFHDPLSADQRAAVAAHVPWTRVVRPGTTTYQGEQIDLLSFARANRERLLLKPN HHHCCCCCCCCCCCCCCCEEEEECCHHHEECCCCCCCCCCCCHHHHHHHCCCCEEEECCC DEYGGKGITIGWEVSADEWDAALQAALSSPFVVQERVTIAYEPYPALIDGKVVIGERLVD CCCCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEECEEEEECCCCCEECCEEEECCEEEC SDPFLFGTEVNGCLCRLSTVTLLNVTAGGGSTVPVFIIDE CCCEEEECCCCCHHEEEEEEEEEEEECCCCCEEEEEEECC >Mature Secondary Structure TLAQAIADYHALLEPTLAVESWQRLTAEMRARRLYFGERPLATVLRPRLITASQYELLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHCCHHHHHHHH RGTQQVAEAARAIVAAALDSSEAGQAVREVLMLTPLEERLIEMHPGYLEPSAHSRMDTFL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCEEE TVDGSSLQFVEYNAESPAAIAYEDLLAQAFLAMPVMQEFAKRYPILPLPARQYLLRTLLD EECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH CWRAAGSPGHEPQVAIVDWHGVPTATEFEMFRQYFVEHGLPAVICAPQDLSFRDGQLLAP HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECC TPDGGEMPVTIVFKRVLTSEFLTHYGEEALSHPLVQAYAAGACVIVNSFRAKLLHKKSLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH ALLSDERFHDPLSADQRAAVAAHVPWTRVVRPGTTTYQGEQIDLLSFARANRERLLLKPN HHHCCCCCCCCCCCCCCCEEEEECCHHHEECCCCCCCCCCCCHHHHHHHCCCCEEEECCC DEYGGKGITIGWEVSADEWDAALQAALSSPFVVQERVTIAYEPYPALIDGKVVIGERLVD CCCCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEECEEEEECCCCCEECCEEEECCEEEC SDPFLFGTEVNGCLCRLSTVTLLNVTAGGGSTVPVFIIDE CCCEEEECCCCCHHEEEEEEEEEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA