| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523343
Identifier: 222523343
GI number: 222523343
Start: 44447
End: 45322
Strand: Reverse
Name: 222523343
Synonym: Chy400_0044
Alternate gene names: NA
Gene position: 45322-44447 (Counterclockwise)
Preceding gene: 222523345
Following gene: 222523342
Centisome position: 0.86
GC content: 59.02
Gene sequence:
>876_bases ATGCGCACATTTATTTCTGGTATTCCAACGCCTAAACCGGCACTCTTCTTCTCGCGCGCAGCACGCGATCAGGCTGTCAT TTTCGATCCGGCCTGCGCTCCCCTTCTGCGTCCGGTTGTTGACCGCGAATCATTGCAGCCCTGGTATACGCCAACCGGTG AACGCTGGCTGTTGACGCTGCCACACGGATATTCGCAGCGTCTGGGTATCAATTCGTTTGCTGACCTGGTCAGGCACCAC CCTGGCTTGCAACGGCATCTGCGTGAGTATGCCGATGATCCGGAACCGTACTGGTGGGAATTGCCGGCTGCGGCGACTGC GGTGCTGACCGCACCAACCCCGCGGATATGTATCGGCGATGGTGATCAAGTGTGTCTGAGTTGGGATGCCGGTCAGGCAG TCGTTCTGGCGCCGGTTCGGATGGTGGCACCTGCCGATCACCTTACCCTGGCTCTGCTTGCTTCGACTAAAGGAAAGCAG ATGATCCGGCAAGCTCACGACACGTTTACCCTGCCGCCGGTACCCACTGCCATTGGCGGGCGACTGGCGGAGCTTGCTGC ACAGGCAGTGACCATGGCCCACGAACGACATACACTAAGCCGTGAATTTGCCCGCCGGCTGTTGGCCGATTTCGGGCCGC CGGGCAGCACGCTTAGCCCGCTGCTTGAACGCTGGTGGGAACTGGAATTTCGTGATCTGCTGGCTGAAGTTGCCCGTGCG CTCCGTAACCCAATCCCAGAACCGTTCCAACCCTTTTGGCTGGCCCGCCATACCGAGGGTCGTGCCCGCTACTACACACT GACGGCTGAAATTGCCGCGCTTGAAGCAGCCATTGATGAGATTGTTCATCCACTGTGGCCAGAAGAATTGCCATGA
Upstream 100 bases:
>100_bases TGGCTAGCTGCCACTACACATTAAACGGTTGATTGTGTTTTCATGTATGATACAGTTGTATACTATATCATGATCTTTAT TGTAGCATGACCCACTAAGA
Downstream 100 bases:
>100_bases CGTCGCCTCACTATCCTGTTCCTGCCGGTACCGCCCGTACCGAATTGATTGTGCGTGGTTCGCGCTTTATTGCTCAGCTC TTCCCTACGCCAACCGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRTFISGIPTPKPALFFSRAARDQAVIFDPACAPLLRPVVDRESLQPWYTPTGERWLLTLPHGYSQRLGINSFADLVRHH PGLQRHLREYADDPEPYWWELPAAATAVLTAPTPRICIGDGDQVCLSWDAGQAVVLAPVRMVAPADHLTLALLASTKGKQ MIRQAHDTFTLPPVPTAIGGRLAELAAQAVTMAHERHTLSREFARRLLADFGPPGSTLSPLLERWWELEFRDLLAEVARA LRNPIPEPFQPFWLARHTEGRARYYTLTAEIAALEAAIDEIVHPLWPEELP
Sequences:
>Translated_291_residues MRTFISGIPTPKPALFFSRAARDQAVIFDPACAPLLRPVVDRESLQPWYTPTGERWLLTLPHGYSQRLGINSFADLVRHH PGLQRHLREYADDPEPYWWELPAAATAVLTAPTPRICIGDGDQVCLSWDAGQAVVLAPVRMVAPADHLTLALLASTKGKQ MIRQAHDTFTLPPVPTAIGGRLAELAAQAVTMAHERHTLSREFARRLLADFGPPGSTLSPLLERWWELEFRDLLAEVARA LRNPIPEPFQPFWLARHTEGRARYYTLTAEIAALEAAIDEIVHPLWPEELP >Mature_291_residues MRTFISGIPTPKPALFFSRAARDQAVIFDPACAPLLRPVVDRESLQPWYTPTGERWLLTLPHGYSQRLGINSFADLVRHH PGLQRHLREYADDPEPYWWELPAAATAVLTAPTPRICIGDGDQVCLSWDAGQAVVLAPVRMVAPADHLTLALLASTKGKQ MIRQAHDTFTLPPVPTAIGGRLAELAAQAVTMAHERHTLSREFARRLLADFGPPGSTLSPLLERWWELEFRDLLAEVARA LRNPIPEPFQPFWLARHTEGRARYYTLTAEIAALEAAIDEIVHPLWPEELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32570; Mature: 32570
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFISGIPTPKPALFFSRAARDQAVIFDPACAPLLRPVVDRESLQPWYTPTGERWLLTL CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEC PHGYSQRLGINSFADLVRHHPGLQRHLREYADDPEPYWWELPAAATAVLTAPTPRICIGD CCCCCHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCHHHEEEEECCCCEEEECC GDQVCLSWDAGQAVVLAPVRMVAPADHLTLALLASTKGKQMIRQAHDTFTLPPVPTAIGG CCEEEEEECCCCEEEEECHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH RLAELAAQAVTMAHERHTLSREFARRLLADFGPPGSTLSPLLERWWELEFRDLLAEVARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH LRNPIPEPFQPFWLARHTEGRARYYTLTAEIAALEAAIDEIVHPLWPEELP HHCCCCCCCCCHHEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRTFISGIPTPKPALFFSRAARDQAVIFDPACAPLLRPVVDRESLQPWYTPTGERWLLTL CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEC PHGYSQRLGINSFADLVRHHPGLQRHLREYADDPEPYWWELPAAATAVLTAPTPRICIGD CCCCCHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCHHHEEEEECCCCEEEECC GDQVCLSWDAGQAVVLAPVRMVAPADHLTLALLASTKGKQMIRQAHDTFTLPPVPTAIGG CCEEEEEECCCCEEEEECHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH RLAELAAQAVTMAHERHTLSREFARRLLADFGPPGSTLSPLLERWWELEFRDLLAEVARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH LRNPIPEPFQPFWLARHTEGRARYYTLTAEIAALEAAIDEIVHPLWPEELP HHCCCCCCCCCHHEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA