| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yigZ [C]
Identifier: 222523342
GI number: 222523342
Start: 43830
End: 44450
Strand: Reverse
Name: yigZ [C]
Synonym: Chy400_0043
Alternate gene names: 222523342
Gene position: 44450-43830 (Counterclockwise)
Preceding gene: 222523343
Following gene: 222523341
Centisome position: 0.84
GC content: 57.17
Gene sequence:
>621_bases ATGACGTCGCCTCACTATCCTGTTCCTGCCGGTACCGCCCGTACCGAATTGATTGTGCGTGGTTCGCGCTTTATTGCTCA GCTCTTCCCTACGCCAACCGTCGATGCTGCACGGGAAGCAATTGCGATGGTGCGCGCAGCAATGCCTGACGCAACACATC ACTGCTATGCCTATCTGGTTGGCTATGGGCAGAGTACCATCGCCGGTATGAGTGATGACGGCGAGCCGGCCGGCAGTGCC GGTCGCCCGATGATGGCAGTCTTGCGAGGGGCTGATCTGGGTGATGTTACGGTTGTGGTAACCCGCTATTTTGGCGGAAC CTTGCTGGGCATCGGCGGGCTGGTGCGAGCGTACAGTGATGCGACGCGGGCCGTGTTAGAAATCGTACCGCGCACACAAC GGGTTATCTATCAGCGGATCATCGTACACTTGCAGTATTCCGATTACACGGCTATTCGCCGCTTACTTGAAGCTCACGCG GCAGTAATTGTCGAAGAAGTATTTGCTGTCGATGTCGTCATTACCGCCGATCTACCGACCGATCACGTGGCTGTCGTCAA CCACCAGATCGGCGAGATCAGTGCCGGTCGCGCACGGCTTGAGACAGCGCCTATGGTATAA
Upstream 100 bases:
>100_bases CCGAGGGTCGTGCCCGCTACTACACACTGACGGCTGAAATTGCCGCGCTTGAAGCAGCCATTGATGAGATTGTTCATCCA CTGTGGCCAGAAGAATTGCC
Downstream 100 bases:
>100_bases TAAAAGCGATGTACGCACTGCATCCGGCTACTGTCCATATTCCAATTGGGCTGCTGCTGGCCAGCAGTCTCTTTACGTTC ATTGCCCTGCGCACCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTSPHYPVPAGTARTELIVRGSRFIAQLFPTPTVDAAREAIAMVRAAMPDATHHCYAYLVGYGQSTIAGMSDDGEPAGSA GRPMMAVLRGADLGDVTVVVTRYFGGTLLGIGGLVRAYSDATRAVLEIVPRTQRVIYQRIIVHLQYSDYTAIRRLLEAHA AVIVEEVFAVDVVITADLPTDHVAVVNHQIGEISAGRARLETAPMV
Sequences:
>Translated_206_residues MTSPHYPVPAGTARTELIVRGSRFIAQLFPTPTVDAAREAIAMVRAAMPDATHHCYAYLVGYGQSTIAGMSDDGEPAGSA GRPMMAVLRGADLGDVTVVVTRYFGGTLLGIGGLVRAYSDATRAVLEIVPRTQRVIYQRIIVHLQYSDYTAIRRLLEAHA AVIVEEVFAVDVVITADLPTDHVAVVNHQIGEISAGRARLETAPMV >Mature_205_residues TSPHYPVPAGTARTELIVRGSRFIAQLFPTPTVDAAREAIAMVRAAMPDATHHCYAYLVGYGQSTIAGMSDDGEPAGSAG RPMMAVLRGADLGDVTVVVTRYFGGTLLGIGGLVRAYSDATRAVLEIVPRTQRVIYQRIIVHLQYSDYTAIRRLLEAHAA VIVEEVFAVDVVITADLPTDHVAVVNHQIGEISAGRARLETAPMV
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=196, Percent_Identity=36.2244897959184, Blast_Score=104, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22084; Mature: 21953
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPHYPVPAGTARTELIVRGSRFIAQLFPTPTVDAAREAIAMVRAAMPDATHHCYAYLV CCCCCCCCCCCCCHHHEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHE GYGQSTIAGMSDDGEPAGSAGRPMMAVLRGADLGDVTVVVTRYFGGTLLGIGGLVRAYSD ECCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHEEHHHCCHHHHHHHHHHHHHH ATRAVLEIVPRTQRVIYQRIIVHLQYSDYTAIRRLLEAHAAVIVEEVFAVDVVITADLPT HHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCC DHVAVVNHQIGEISAGRARLETAPMV CCEEEECCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure TSPHYPVPAGTARTELIVRGSRFIAQLFPTPTVDAAREAIAMVRAAMPDATHHCYAYLV CCCCCCCCCCCCHHHEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHE GYGQSTIAGMSDDGEPAGSAGRPMMAVLRGADLGDVTVVVTRYFGGTLLGIGGLVRAYSD ECCCHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHEEHHHCCHHHHHHHHHHHHHH ATRAVLEIVPRTQRVIYQRIIVHLQYSDYTAIRRLLEAHAAVIVEEVFAVDVVITADLPT HHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCC DHVAVVNHQIGEISAGRARLETAPMV CCEEEECCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]