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The map label for this gene is trbG [H]

Identifier: 222109215

GI number: 222109215

Start: 119879

End: 120700

Strand: Reverse

Name: trbG [H]

Synonym: Avi_9650

Alternate gene names: 222109215

Gene position: 120700-119879 (Counterclockwise)

Preceding gene: 222109216

Following gene: 222109214

Centisome position: 92.54

GC content: 58.03

Gene sequence:

>822_bases
ATGTTCAAATTGACGAAATTGCGTGCGAGCGTTGTGACCGCACTGGTCCTTTTGACTGCCGCGCCCACCCTGGGCGGTGC
TGCCGACTACAACGCAAGCAAGGGCACCCGGCTTTCAGGCCAATGGCAGGACGCCGGCGCTGTCATGACACGCGGACCTG
ACGGACAGGTCATCTATCTGTTTGGCGAAACGCAGCCGACCGTCGTCTGCGCACCCTTGCAGCTTTGTGAGGTGCAGCTG
CAGCCCGGAGAGGCCGTGCGCGATGTTCTCGTCGGTGACACTGTTCGATGGCAGGTTGAGCCCGCGTCGTCTGGTTCGCC
GCAGGGACAGCGTATCAGCCTGATCGTCAAGCCTGCCGAAGCCGGTTTGAAGACTTCGATGGTCATTACGACGTCACGCC
GGACCTATCATATCAATCTGCAGTCCGACGGCACACGCTATATGGCGCGCGTCGCCTTCAAATACCCCGAAGACGTTCGC
CAGCAGCTAGCGGCGGTAAACCAGAAGATCTCGGATAGCATCATTCCGGGTGCTGGCATTCCAGCCGAAAACCTCCGTTT
TGATTTTTCCATGCGCGGCTCCGCCCGCTGGAAACCAACCCGGATCTATACCGACGGGACGAAGACGTACATTCAGTTCC
CCGGCCAAATGAGAAGTGGCGATGCCCCAGTCCTCTATGTCGTGTCCGGAGGACAGAACCAGATCGTCAACTACCGACTG
AACAACAACATGATGGTGGTCGATTATCTAATCGATCGGGCCGTTCTGATTTCGGGCGTCGGTCGGCAGCAGCAGAAAAT
CACCATCAGCAGGAGGGGTTAA

Upstream 100 bases:

>100_bases
GCCGCCCCAGGACGAAGCTATCATTCGCCTCAACCCGATCGGTCTTTACCTCAAGGACTTCGATTGGACGGCCCAACTTT
AAGACGCTCGCGGAGAGACT

Downstream 100 bases:

>100_bases
TCCATGCAGGGAAACTCCACACTCGTACGCGTTCTCGCGATCGGTATCGTTTCTGCCTCGCTTGCGGCCTGCACGACGTC
GGGCGGCTATTTCTCCCCTC

Product: conjugal transfer protein TrbG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MFKLTKLRASVVTALVLLTAAPTLGGAADYNASKGTRLSGQWQDAGAVMTRGPDGQVIYLFGETQPTVVCAPLQLCEVQL
QPGEAVRDVLVGDTVRWQVEPASSGSPQGQRISLIVKPAEAGLKTSMVITTSRRTYHINLQSDGTRYMARVAFKYPEDVR
QQLAAVNQKISDSIIPGAGIPAENLRFDFSMRGSARWKPTRIYTDGTKTYIQFPGQMRSGDAPVLYVVSGGQNQIVNYRL
NNNMMVVDYLIDRAVLISGVGRQQQKITISRRG

Sequences:

>Translated_273_residues
MFKLTKLRASVVTALVLLTAAPTLGGAADYNASKGTRLSGQWQDAGAVMTRGPDGQVIYLFGETQPTVVCAPLQLCEVQL
QPGEAVRDVLVGDTVRWQVEPASSGSPQGQRISLIVKPAEAGLKTSMVITTSRRTYHINLQSDGTRYMARVAFKYPEDVR
QQLAAVNQKISDSIIPGAGIPAENLRFDFSMRGSARWKPTRIYTDGTKTYIQFPGQMRSGDAPVLYVVSGGQNQIVNYRL
NNNMMVVDYLIDRAVLISGVGRQQQKITISRRG
>Mature_273_residues
MFKLTKLRASVVTALVLLTAAPTLGGAADYNASKGTRLSGQWQDAGAVMTRGPDGQVIYLFGETQPTVVCAPLQLCEVQL
QPGEAVRDVLVGDTVRWQVEPASSGSPQGQRISLIVKPAEAGLKTSMVITTSRRTYHINLQSDGTRYMARVAFKYPEDVR
QQLAAVNQKISDSIIPGAGIPAENLRFDFSMRGSARWKPTRIYTDGTKTYIQFPGQMRSGDAPVLYVVSGGQNQIVNYRL
NNNMMVVDYLIDRAVLISGVGRQQQKITISRRG

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014142 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 29838; Mature: 29838

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLTKLRASVVTALVLLTAAPTLGGAADYNASKGTRLSGQWQDAGAVMTRGPDGQVIYL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEE
FGETQPTVVCAPLQLCEVQLQPGEAVRDVLVGDTVRWQVEPASSGSPQGQRISLIVKPAE
ECCCCCEEEECCCEEEEEEECCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCC
AGLKTSMVITTSRRTYHINLQSDGTRYMARVAFKYPEDVRQQLAAVNQKISDSIIPGAGI
CCCEEEEEEEECCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
PAENLRFDFSMRGSARWKPTRIYTDGTKTYIQFPGQMRSGDAPVLYVVSGGQNQIVNYRL
CHHHEEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEE
NNNMMVVDYLIDRAVLISGVGRQQQKITISRRG
CCCEEEEHHHHHHHHEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MFKLTKLRASVVTALVLLTAAPTLGGAADYNASKGTRLSGQWQDAGAVMTRGPDGQVIYL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEE
FGETQPTVVCAPLQLCEVQLQPGEAVRDVLVGDTVRWQVEPASSGSPQGQRISLIVKPAE
ECCCCCEEEECCCEEEEEEECCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEECCC
AGLKTSMVITTSRRTYHINLQSDGTRYMARVAFKYPEDVRQQLAAVNQKISDSIIPGAGI
CCCEEEEEEEECCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
PAENLRFDFSMRGSARWKPTRIYTDGTKTYIQFPGQMRSGDAPVLYVVSGGQNQIVNYRL
CHHHEEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEE
NNNMMVVDYLIDRAVLISGVGRQQQKITISRRG
CCCEEEEHHHHHHHHEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]