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The map label for this gene is trbH [H]

Identifier: 222109214

GI number: 222109214

Start: 119420

End: 119875

Strand: Reverse

Name: trbH [H]

Synonym: Avi_9648

Alternate gene names: 222109214

Gene position: 119875-119420 (Counterclockwise)

Preceding gene: 222109215

Following gene: 222109213

Centisome position: 91.9

GC content: 60.96

Gene sequence:

>456_bases
ATGCAGGGAAACTCCACACTCGTACGCGTTCTCGCGATCGGTATCGTTTCTGCCTCGCTTGCGGCCTGCACGACGTCGGG
CGGCTATTTCTCCCCTCAAACCAGCATGGATGCCGCTAATCTCCAGGCGCCGGCCGCCGATGCTGTTGCCGCCGACATGG
TTGCCCGGCTTGCCGAACACGTCGGTCCGGGAACCGGTACCATTGTTCTCAAGACTGACAACACCGCATTCGCATCTGCG
TTTGAGAAGCATTTGCGTGAATGGGGCTACGCGGTCGATGCGACCGCGACCGGCCCCAAAGCTATCGCGCTTGCCTATAC
CGTGGATTCGCTGGATGGCGACGTGATCGCGCGGGTTTCGACGCCGGGCGTCGAACTGGCCCGTCAATATCAGGCGACGA
AGACAGGTGCAGTGGCCTCAAGCCCGCTTTCGGTCATGAAGCACGGCGAAACGTAA

Upstream 100 bases:

>100_bases
CAACATGATGGTGGTCGATTATCTAATCGATCGGGCCGTTCTGATTTCGGGCGTCGGTCGGCAGCAGCAGAAAATCACCA
TCAGCAGGAGGGGTTAATCC

Downstream 100 bases:

>100_bases
AGAGGGCAGGGGTATGAGTTCAATCGATCTTGGATCAGCTGAGGAGGATGATGAGCGGCCAAAAATCCGTCGGCTGAATC
GCCTTCCGATCTTCTTCTTT

Product: conjugal transfer protein TrbH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MQGNSTLVRVLAIGIVSASLAACTTSGGYFSPQTSMDAANLQAPAADAVAADMVARLAEHVGPGTGTIVLKTDNTAFASA
FEKHLREWGYAVDATATGPKAIALAYTVDSLDGDVIARVSTPGVELARQYQATKTGAVASSPLSVMKHGET

Sequences:

>Translated_151_residues
MQGNSTLVRVLAIGIVSASLAACTTSGGYFSPQTSMDAANLQAPAADAVAADMVARLAEHVGPGTGTIVLKTDNTAFASA
FEKHLREWGYAVDATATGPKAIALAYTVDSLDGDVIARVSTPGVELARQYQATKTGAVASSPLSVMKHGET
>Mature_151_residues
MQGNSTLVRVLAIGIVSASLAACTTSGGYFSPQTSMDAANLQAPAADAVAADMVARLAEHVGPGTGTIVLKTDNTAFASA
FEKHLREWGYAVDATATGPKAIALAYTVDSLDGDVIARVSTPGVELARQYQATKTGAVASSPLSVMKHGET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010837 [H]

Pfam domain/function: PF07283 TrbH [H]

EC number: NA

Molecular weight: Translated: 15383; Mature: 15383

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNSTLVRVLAIGIVSASLAACTTSGGYFSPQTSMDAANLQAPAADAVAADMVARLAEH
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VGPGTGTIVLKTDNTAFASAFEKHLREWGYAVDATATGPKAIALAYTVDSLDGDVIARVS
CCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEECCCCCCEEEEEC
TPGVELARQYQATKTGAVASSPLSVMKHGET
CCHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MQGNSTLVRVLAIGIVSASLAACTTSGGYFSPQTSMDAANLQAPAADAVAADMVARLAEH
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VGPGTGTIVLKTDNTAFASAFEKHLREWGYAVDATATGPKAIALAYTVDSLDGDVIARVS
CCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEECCCCCCEEEEEC
TPGVELARQYQATKTGAVASSPLSVMKHGET
CCHHHHHHHHHHHHCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]