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The map label for this gene is trbI [H]

Identifier: 222109213

GI number: 222109213

Start: 118069

End: 119406

Strand: Reverse

Name: trbI [H]

Synonym: Avi_9647

Alternate gene names: 222109213

Gene position: 119406-118069 (Counterclockwise)

Preceding gene: 222109214

Following gene: 222109212

Centisome position: 91.54

GC content: 59.49

Gene sequence:

>1338_bases
ATGAGTTCAATCGATCTTGGATCAGCTGAGGAGGATGATGAGCGGCCAAAAATCCGTCGGCTGAATCGCCTTCCGATCTT
CTTCTTTATTGCACTGATCGTCATCCTCGTGGTCGTCGTGATCTGGGGCATGGCGCAACGCGGCCTGATCGGAAATCGTG
GTGCCCAGCCGGAGCAATCGGTCGGCCAACCGGCGTCCGATTTTGCCGACGAGCTGAAGCGCAATATCGGTGACGGCGTC
AACGAGCCTCAAAGGCAAGATCCGCTAATTATCACGCCCGGCGAGACACCGATGGAACTTCCGGAAGGCGTGAACCCATT
CCAGCCGGGGTCGCGCCAACGGCCGACGACGCAGCAAGCGGAAACGCCCCTCGAGCCGGAAGCGGATTGGCGTGAACGCC
TAAAGCGTGAGCATGAAGAGGCTCTGTTGCGCGAGCAGAACCGCCAGAGGCTGGCGGCGATGCAAGCACAGGCGAATGCT
CGCAACAGTCCGATGGCCGTCGACATAGGGAAAGTCACTCAGCAACAGGGCATAGGCCAGCAAGGGCAGGGGCAGGCGAA
CGGCCTGACGAGCCCGAATGGCACGGCGGACCTTCTTTCCGCAGCCATGCGTGCGGCTGGCGCGGGGCCAGGCGGGATGG
CCGATCCCAACAACCAGCAAGGCAAGATCTCGTTTCTGAACAAGGATATTGCCGATGCGGGCTATCTTCCCAACCAGATC
GTACCGCAGCAATCGCCTTTCGAGCTAAAACGTGGTTCGGTGATCCCGGCGACATTGATCACCGGCATCAATTCAGACTT
ACCGGGGCGGATCACCGCGCAGGTGCGCCAGCACGTCTATGACAGCGCGACCGGCCACAGGCTTCTGATCCCGCAAGGGA
CGAAACTGTTTGGCCGGTACGATTCCGAAGTGTCCTATGGTCAGTCACGGGCCTTGGTTGTCTGGACCGACATCATTTTC
CCAAACGGGTCGACACTTCAAATCGGCGGTATGGCTGGCGTCGATACCCAAGGGTACGGCGGGTTCAAGGACAAGGTGAA
GAACCATTTCTGGCGGGTTTGGGGTTCGGCAATCCTGGTCGCCGCGATCGGAACCGGTGTCGACATGGCTTTGCCAGAGA
GCAACAGTAACGCCTTCGGCGTCACGCAGAACGATCCGACGGATGCGGCCCGCCGCAACTTCGCGGAGACTTTCGGCCGG
GTTGCTGACAGGACCATCGACAAGAACATGAATATCCAGCCGACGCTGGAAATTCGGCCGGGGTACCAGTTCAACATCCT
CGTGGATCAGGACATTGTTCTCCCCGGCGCCTATCAAACCGGATATGTGGAGCGGTAA

Upstream 100 bases:

>100_bases
GTCGAACTGGCCCGTCAATATCAGGCGACGAAGACAGGTGCAGTGGCCTCAAGCCCGCTTTCGGTCATGAAGCACGGCGA
AACGTAAAGAGGGCAGGGGT

Downstream 100 bases:

>100_bases
ATGCCAATACTCTCGCGCAAGGGACTGCAACTCCCTGTCATCATCGGCGTGGCCGCTCTCTTGAGCGGTTGCGTGCTGCC
CGAACGGCTCGACGCTACCA

Product: conjugal transfer protein TrbI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSSIDLGSAEEDDERPKIRRLNRLPIFFFIALIVILVVVVIWGMAQRGLIGNRGAQPEQSVGQPASDFADELKRNIGDGV
NEPQRQDPLIITPGETPMELPEGVNPFQPGSRQRPTTQQAETPLEPEADWRERLKREHEEALLREQNRQRLAAMQAQANA
RNSPMAVDIGKVTQQQGIGQQGQGQANGLTSPNGTADLLSAAMRAAGAGPGGMADPNNQQGKISFLNKDIADAGYLPNQI
VPQQSPFELKRGSVIPATLITGINSDLPGRITAQVRQHVYDSATGHRLLIPQGTKLFGRYDSEVSYGQSRALVVWTDIIF
PNGSTLQIGGMAGVDTQGYGGFKDKVKNHFWRVWGSAILVAAIGTGVDMALPESNSNAFGVTQNDPTDAARRNFAETFGR
VADRTIDKNMNIQPTLEIRPGYQFNILVDQDIVLPGAYQTGYVER

Sequences:

>Translated_445_residues
MSSIDLGSAEEDDERPKIRRLNRLPIFFFIALIVILVVVVIWGMAQRGLIGNRGAQPEQSVGQPASDFADELKRNIGDGV
NEPQRQDPLIITPGETPMELPEGVNPFQPGSRQRPTTQQAETPLEPEADWRERLKREHEEALLREQNRQRLAAMQAQANA
RNSPMAVDIGKVTQQQGIGQQGQGQANGLTSPNGTADLLSAAMRAAGAGPGGMADPNNQQGKISFLNKDIADAGYLPNQI
VPQQSPFELKRGSVIPATLITGINSDLPGRITAQVRQHVYDSATGHRLLIPQGTKLFGRYDSEVSYGQSRALVVWTDIIF
PNGSTLQIGGMAGVDTQGYGGFKDKVKNHFWRVWGSAILVAAIGTGVDMALPESNSNAFGVTQNDPTDAARRNFAETFGR
VADRTIDKNMNIQPTLEIRPGYQFNILVDQDIVLPGAYQTGYVER
>Mature_444_residues
SSIDLGSAEEDDERPKIRRLNRLPIFFFIALIVILVVVVIWGMAQRGLIGNRGAQPEQSVGQPASDFADELKRNIGDGVN
EPQRQDPLIITPGETPMELPEGVNPFQPGSRQRPTTQQAETPLEPEADWRERLKREHEEALLREQNRQRLAAMQAQANAR
NSPMAVDIGKVTQQQGIGQQGQGQANGLTSPNGTADLLSAAMRAAGAGPGGMADPNNQQGKISFLNKDIADAGYLPNQIV
PQQSPFELKRGSVIPATLITGINSDLPGRITAQVRQHVYDSATGHRLLIPQGTKLFGRYDSEVSYGQSRALVVWTDIIFP
NGSTLQIGGMAGVDTQGYGGFKDKVKNHFWRVWGSAILVAAIGTGVDMALPESNSNAFGVTQNDPTDAARRNFAETFGRV
ADRTIDKNMNIQPTLEIRPGYQFNILVDQDIVLPGAYQTGYVER

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 48485; Mature: 48354

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIDLGSAEEDDERPKIRRLNRLPIFFFIALIVILVVVVIWGMAQRGLIGNRGAQPEQS
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VGQPASDFADELKRNIGDGVNEPQRQDPLIITPGETPMELPEGVNPFQPGSRQRPTTQQA
HCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCHHC
ETPLEPEADWRERLKREHEEALLREQNRQRLAAMQAQANARNSPMAVDIGKVTQQQGIGQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCC
QGQGQANGLTSPNGTADLLSAAMRAAGAGPGGMADPNNQQGKISFLNKDIADAGYLPNQI
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCC
VPQQSPFELKRGSVIPATLITGINSDLPGRITAQVRQHVYDSATGHRLLIPQGTKLFGRY
CCCCCCCHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHCC
DSEVSYGQSRALVVWTDIIFPNGSTLQIGGMAGVDTQGYGGFKDKVKNHFWRVWGSAILV
CCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAIGTGVDMALPESNSNAFGVTQNDPTDAARRNFAETFGRVADRTIDKNMNIQPTLEIRP
HHHCCCCEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GYQFNILVDQDIVLPGAYQTGYVER
CEEEEEEECCCEECCCCCCCCCCCC
>Mature Secondary Structure 
SSIDLGSAEEDDERPKIRRLNRLPIFFFIALIVILVVVVIWGMAQRGLIGNRGAQPEQS
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VGQPASDFADELKRNIGDGVNEPQRQDPLIITPGETPMELPEGVNPFQPGSRQRPTTQQA
HCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCHHC
ETPLEPEADWRERLKREHEEALLREQNRQRLAAMQAQANARNSPMAVDIGKVTQQQGIGQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCC
QGQGQANGLTSPNGTADLLSAAMRAAGAGPGGMADPNNQQGKISFLNKDIADAGYLPNQI
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCC
VPQQSPFELKRGSVIPATLITGINSDLPGRITAQVRQHVYDSATGHRLLIPQGTKLFGRY
CCCCCCCHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHCC
DSEVSYGQSRALVVWTDIIFPNGSTLQIGGMAGVDTQGYGGFKDKVKNHFWRVWGSAILV
CCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAIGTGVDMALPESNSNAFGVTQNDPTDAARRNFAETFGRVADRTIDKNMNIQPTLEIRP
HHHCCCCEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GYQFNILVDQDIVLPGAYQTGYVER
CEEEEEEECCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]