Click here to switch to the map view.

The map label for this gene is traG [H]

Identifier: 222109177

GI number: 222109177

Start: 62749

End: 64638

Strand: Reverse

Name: traG [H]

Synonym: Avi_9589

Alternate gene names: 222109177

Gene position: 64638-62749 (Counterclockwise)

Preceding gene: 222109178

Following gene: 222109176

Centisome position: 49.56

GC content: 58.2

Gene sequence:

>1890_bases
ATGAAAGGGATTGAATTCTGGCTGGCCGGTTTCGGCACCAGCCCGCAAGCCTACCAGGCACTGGGACGCGTCGGCCTGAC
CGTTCCCTATGCGACGGCAGCTCTGGTCGGCGTCATCTTTTTGTTCAGCACCAGAGGCTCTCTCCTGATCCAGTGGGCAG
GATGGGGGGTGCTGATCGGTGGTTTTTTGTCGATGGCACTGGGTGTTGGTGGTGAGGGATTTCGGCTGATCGCAATTCGA
TCCAGCCAGCCAAATGCTCTTCTTTTGCCTCTGGTCGACTGGTTTACGATCGCCGGAGCCACAGCCTGCTTCTTTATCGC
GATCTTCGGTTTAAAGGTCGGGCAGCGTGGCAACATGGCGTTCGGCCGGACGGGTCCGAAGCGCCTGAAAGGCACAAGGG
CTGTCCATGGTGCAAACGACTGGATGAGCCTGTCTCACGCCGCAAAGCTTTTCCCGCCGATCGGCGGGATTGTCGTTGGA
GAAAATTACCGGCCTGACCAAGATAGTATCGGTCAGGTTGGTTTCGATCCTCGTCGAAAGGAGACCTGGGGCAAAGGCGG
CAAAGCGCCCCTCCTTGGTTTCGACGCCGGATTTGGATCCACGCATGGCCTCGTGTTCGCCGGCTCTGGCGGCTTCAAAA
CCACGTCCGTTGTCATTCCCACGGCACTCACGTTCAAAGGGTCCATGATCGTGCTTGATCCATCGACCGAGATCGCGCCG
ATGGTCAGCGAGCATCGGACCAGAAACCATCAGGAGGTCGTGTCGCTCGATCCGAGGTTGCCGCATATCGGTTTCAATGT
GCTCGACTGGATCGGCAAACACGGCAATACGCCGGAAGAGGATATCGCCTCGGTGGCCGCGTGGCTGATGAGCGAAAAGC
CGCGCGTCAGTTCCGGGTCGGACGACTTTTTCCGAACCACCGCCGAGCAGCTCATCGCGGCGGTTATCGCCGACGTTATG
CTGACCGATCTCGATGAGATCGAAGACGACCCGGACGAAGATCCCGAATTCAAGACGGGCGAAAAGTCGCTGCGCATGGT
GCGCAAGCGGCTCGCCCAGCCTGAAAAGACGCTGCAGAAGAAGCTCGAAAAGATTCACAAGAACACGTCGTCGCGGTTCG
TGCGAGAGAATGTAGCGCCCTTCATCAACATGACCGAGCAGACGTTTTCCGGCGTCTATGCGACGGCCACCAAGGAAACC
CACTGGCTGTCATACGAAAACTACGCGGCTGTCGTTTCCGGGAGATCCTTTCATACGGAAGACATTGCCTCTGGCAACAT
GACGGTGTTTATCAACATCGATCTATCGACCCTCGAAAATCATCCCGGCATGGCCCGCGTGATAATTGGAGCGTTCCTGA
AGGCGCTCTATAATCGCAACGGCGATGTCTCAGAACGCGCCCTCTTCCTTCTCGATGAGGCGGCACGTCTGGGGTATATG
CGCATCATCGAAACCGCCCGCGATGCTGGTCGCAAATACGGCATCACCTTGCTGATGCTGTTCCAGTCGCTAGGACAAAT
GCGGGAAGCGTTCGGCGGTCGCGACGCGACCAGCAAATGGTTCGAGTCCGCGTCCTGGGTATCGTTTTCGGCGGTGAACG
ATACCGATACCGCGGATTACATTTCCAGGCGTTGCGGCACGACGACCATCGAGGTCGATCAGGTGACGCGCAATTCCAAC
GGTGGGCGCAACGGACGCACCCGTTCCAAACAGATCTCGCAGCGGCCGTTGATATTGCCCTACGAGGTCATGCAGATGCG
GACCGACGAGCAGATCATTTTCACGAGCGGTAACCCGCCGCTGCGCTGCGGGCGCGCTATCTATTTCCGCCGTGAGGAAA
TGGCATCGAGGGTGGGACCATCGAACTTTGCGCCGAAAGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
AGGCTGCAAGCCATCGGCAAAAGAGGGTTCGAGGATGCTGCCCAAGAAGATGATGCTCGTGATCGTGCCGGCAGCCCTGA
TGCTGGCACTTACAATTGGA

Downstream 100 bases:

>100_bases
CGCCGTTACATCAAACGGCGGCCTTCGGCCAGGTTTACCACAAGCTGCGGCATTCTCTTCGGCGCAATGGAGGAGCGCGT
TCATGCCTTCGCTTGCTTCG

Product: conjugal transfer coupling protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MKGIEFWLAGFGTSPQAYQALGRVGLTVPYATAALVGVIFLFSTRGSLLIQWAGWGVLIGGFLSMALGVGGEGFRLIAIR
SSQPNALLLPLVDWFTIAGATACFFIAIFGLKVGQRGNMAFGRTGPKRLKGTRAVHGANDWMSLSHAAKLFPPIGGIVVG
ENYRPDQDSIGQVGFDPRRKETWGKGGKAPLLGFDAGFGSTHGLVFAGSGGFKTTSVVIPTALTFKGSMIVLDPSTEIAP
MVSEHRTRNHQEVVSLDPRLPHIGFNVLDWIGKHGNTPEEDIASVAAWLMSEKPRVSSGSDDFFRTTAEQLIAAVIADVM
LTDLDEIEDDPDEDPEFKTGEKSLRMVRKRLAQPEKTLQKKLEKIHKNTSSRFVRENVAPFINMTEQTFSGVYATATKET
HWLSYENYAAVVSGRSFHTEDIASGNMTVFINIDLSTLENHPGMARVIIGAFLKALYNRNGDVSERALFLLDEAARLGYM
RIIETARDAGRKYGITLLMLFQSLGQMREAFGGRDATSKWFESASWVSFSAVNDTDTADYISRRCGTTTIEVDQVTRNSN
GGRNGRTRSKQISQRPLILPYEVMQMRTDEQIIFTSGNPPLRCGRAIYFRREEMASRVGPSNFAPKAAG

Sequences:

>Translated_629_residues
MKGIEFWLAGFGTSPQAYQALGRVGLTVPYATAALVGVIFLFSTRGSLLIQWAGWGVLIGGFLSMALGVGGEGFRLIAIR
SSQPNALLLPLVDWFTIAGATACFFIAIFGLKVGQRGNMAFGRTGPKRLKGTRAVHGANDWMSLSHAAKLFPPIGGIVVG
ENYRPDQDSIGQVGFDPRRKETWGKGGKAPLLGFDAGFGSTHGLVFAGSGGFKTTSVVIPTALTFKGSMIVLDPSTEIAP
MVSEHRTRNHQEVVSLDPRLPHIGFNVLDWIGKHGNTPEEDIASVAAWLMSEKPRVSSGSDDFFRTTAEQLIAAVIADVM
LTDLDEIEDDPDEDPEFKTGEKSLRMVRKRLAQPEKTLQKKLEKIHKNTSSRFVRENVAPFINMTEQTFSGVYATATKET
HWLSYENYAAVVSGRSFHTEDIASGNMTVFINIDLSTLENHPGMARVIIGAFLKALYNRNGDVSERALFLLDEAARLGYM
RIIETARDAGRKYGITLLMLFQSLGQMREAFGGRDATSKWFESASWVSFSAVNDTDTADYISRRCGTTTIEVDQVTRNSN
GGRNGRTRSKQISQRPLILPYEVMQMRTDEQIIFTSGNPPLRCGRAIYFRREEMASRVGPSNFAPKAAG
>Mature_629_residues
MKGIEFWLAGFGTSPQAYQALGRVGLTVPYATAALVGVIFLFSTRGSLLIQWAGWGVLIGGFLSMALGVGGEGFRLIAIR
SSQPNALLLPLVDWFTIAGATACFFIAIFGLKVGQRGNMAFGRTGPKRLKGTRAVHGANDWMSLSHAAKLFPPIGGIVVG
ENYRPDQDSIGQVGFDPRRKETWGKGGKAPLLGFDAGFGSTHGLVFAGSGGFKTTSVVIPTALTFKGSMIVLDPSTEIAP
MVSEHRTRNHQEVVSLDPRLPHIGFNVLDWIGKHGNTPEEDIASVAAWLMSEKPRVSSGSDDFFRTTAEQLIAAVIADVM
LTDLDEIEDDPDEDPEFKTGEKSLRMVRKRLAQPEKTLQKKLEKIHKNTSSRFVRENVAPFINMTEQTFSGVYATATKET
HWLSYENYAAVVSGRSFHTEDIASGNMTVFINIDLSTLENHPGMARVIIGAFLKALYNRNGDVSERALFLLDEAARLGYM
RIIETARDAGRKYGITLLMLFQSLGQMREAFGGRDATSKWFESASWVSFSAVNDTDTADYISRRCGTTTIEVDQVTRNSN
GGRNGRTRSKQISQRPLILPYEVMQMRTDEQIIFTSGNPPLRCGRAIYFRREEMASRVGPSNFAPKAAG

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014135
- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 68963; Mature: 68963

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIEFWLAGFGTSPQAYQALGRVGLTVPYATAALVGVIFLFSTRGSLLIQWAGWGVLIG
CCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
GFLSMALGVGGEGFRLIAIRSSQPNALLLPLVDWFTIAGATACFFIAIFGLKVGQRGNMA
HHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FGRTGPKRLKGTRAVHGANDWMSLSHAAKLFPPIGGIVVGENYRPDQDSIGQVGFDPRRK
CCCCCHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHH
ETWGKGGKAPLLGFDAGFGSTHGLVFAGSGGFKTTSVVIPTALTFKGSMIVLDPSTEIAP
HHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECEEEEECCCEEEECCCCCHHH
MVSEHRTRNHQEVVSLDPRLPHIGFNVLDWIGKHGNTPEEDIASVAAWLMSEKPRVSSGS
HHHHHHCCCCHHHEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC
DDFFRTTAEQLIAAVIADVMLTDLDEIEDDPDEDPEFKTGEKSLRMVRKRLAQPEKTLQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
KLEKIHKNTSSRFVRENVAPFINMTEQTFSGVYATATKETHWLSYENYAAVVSGRSFHTE
HHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCEEECCCCEEEEEECCCCCCH
DIASGNMTVFINIDLSTLENHPGMARVIIGAFLKALYNRNGDVSERALFLLDEAARLGYM
HHCCCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RIIETARDAGRKYGITLLMLFQSLGQMREAFGGRDATSKWFESASWVSFSAVNDTDTADY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCHHHH
ISRRCGTTTIEVDQVTRNSNGGRNGRTRSKQISQRPLILPYEVMQMRTDEQIIFTSGNPP
HHHHCCCCEEEEEHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCC
LRCGRAIYFRREEMASRVGPSNFAPKAAG
CCCCHHHEEEHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKGIEFWLAGFGTSPQAYQALGRVGLTVPYATAALVGVIFLFSTRGSLLIQWAGWGVLIG
CCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
GFLSMALGVGGEGFRLIAIRSSQPNALLLPLVDWFTIAGATACFFIAIFGLKVGQRGNMA
HHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FGRTGPKRLKGTRAVHGANDWMSLSHAAKLFPPIGGIVVGENYRPDQDSIGQVGFDPRRK
CCCCCHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHH
ETWGKGGKAPLLGFDAGFGSTHGLVFAGSGGFKTTSVVIPTALTFKGSMIVLDPSTEIAP
HHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECEEEEECCCEEEECCCCCHHH
MVSEHRTRNHQEVVSLDPRLPHIGFNVLDWIGKHGNTPEEDIASVAAWLMSEKPRVSSGS
HHHHHHCCCCHHHEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC
DDFFRTTAEQLIAAVIADVMLTDLDEIEDDPDEDPEFKTGEKSLRMVRKRLAQPEKTLQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
KLEKIHKNTSSRFVRENVAPFINMTEQTFSGVYATATKETHWLSYENYAAVVSGRSFHTE
HHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCEEECCCCEEEEEECCCCCCH
DIASGNMTVFINIDLSTLENHPGMARVIIGAFLKALYNRNGDVSERALFLLDEAARLGYM
HHCCCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RIIETARDAGRKYGITLLMLFQSLGQMREAFGGRDATSKWFESASWVSFSAVNDTDTADY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCHHHH
ISRRCGTTTIEVDQVTRNSNGGRNGRTRSKQISQRPLILPYEVMQMRTDEQIIFTSGNPP
HHHHCCCCEEEEEHHCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCC
LRCGRAIYFRREEMASRVGPSNFAPKAAG
CCCCHHHEEEHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]