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The map label for this gene is traD [H]

Identifier: 222109178

GI number: 222109178

Start: 64625

End: 64903

Strand: Reverse

Name: traD [H]

Synonym: Avi_9590

Alternate gene names: 222109178

Gene position: 64903-64625 (Counterclockwise)

Preceding gene: 222109179

Following gene: 222109177

Centisome position: 49.76

GC content: 56.63

Gene sequence:

>279_bases
TTGCAATCGGCCCGAAACGAAGATCGCAAAAAGGACACGCGCGAGAAGATCCAGCTTGGCGGTCTGGTGGTCAAAGCCGG
ACTTCGGGATATCGACAAAGCCGTCTTGCTCGGTTGGCTGATGGAGCTCCCAAAGCGCCTGAGCGACGCCGAAGGGGAAT
GGGCAAGGCTGCAAGCCATCGGCAAAAGAGGGTTCGAGGATGCTGCCCAAGAAGATGATGCTCGTGATCGTGCCGGCAGC
CCTGATGCTGGCACTTACAATTGGAATGAAAGGGATTGA

Upstream 100 bases:

>100_bases
CTGGTGTCGGCGCTGAAAGAACTGGCCGCACGATTTCAATCCTCGTCGCAACTGTCCAACACGACGGCTTAGAGGCCGTA
TCGCCCAGAAGGAGAGACAG

Downstream 100 bases:

>100_bases
ATTCTGGCTGGCCGGTTTCGGCACCAGCCCGCAAGCCTACCAGGCACTGGGACGCGTCGGCCTGACCGTTCCCTATGCGA
CGGCAGCTCTGGTCGGCGTC

Product: conjugal transfer protein Dtr system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MQSARNEDRKKDTREKIQLGGLVVKAGLRDIDKAVLLGWLMELPKRLSDAEGEWARLQAIGKRGFEDAAQEDDARDRAGS
PDAGTYNWNERD

Sequences:

>Translated_92_residues
MQSARNEDRKKDTREKIQLGGLVVKAGLRDIDKAVLLGWLMELPKRLSDAEGEWARLQAIGKRGFEDAAQEDDARDRAGS
PDAGTYNWNERD
>Mature_92_residues
MQSARNEDRKKDTREKIQLGGLVVKAGLRDIDKAVLLGWLMELPKRLSDAEGEWARLQAIGKRGFEDAAQEDDARDRAGS
PDAGTYNWNERD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009444 [H]

Pfam domain/function: PF06412 TraD [H]

EC number: NA

Molecular weight: Translated: 10371; Mature: 10371

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSARNEDRKKDTREKIQLGGLVVKAGLRDIDKAVLLGWLMELPKRLSDAEGEWARLQAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GKRGFEDAAQEDDARDRAGSPDAGTYNWNERD
HHCCCHHHHHCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSARNEDRKKDTREKIQLGGLVVKAGLRDIDKAVLLGWLMELPKRLSDAEGEWARLQAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GKRGFEDAAQEDDARDRAGSPDAGTYNWNERD
HHCCCHHHHHCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]