Definition | Agrobacterium vitis S4 plasmid pAtS4b, complete sequence. |
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Accession | NC_011991 |
Length | 130,435 |
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The map label for this gene is 222109171
Identifier: 222109171
GI number: 222109171
Start: 58430
End: 59485
Strand: Direct
Name: 222109171
Synonym: Avi_9577
Alternate gene names: NA
Gene position: 58430-59485 (Clockwise)
Preceding gene: 222109170
Following gene: 222109172
Centisome position: 44.8
GC content: 58.71
Gene sequence:
>1056_bases ATGGCCGCCGACAAAAATACGATGCGGGCCAGACCCGGCGAGGTCATGGGCTATCTGGCCTACGCGCACCCATTTCTTGA CGGAAACGGGCGCACTATCATGACCCTTCGCGCCGAACTTTGCCGTCGCGCTGGAATCCACATCGACTGGTCGCAGACCA ACAAGTTCGACTACCTCAATGCATTGACGAAAGAACTGGACACTCCCGGCAAAGGTCACCTGGACGCTTATCTGAAGCCA TTCCTCCGGATCGAAGCGTTGGACCAGGCCCAGTCGGCAAACATGCTGCGCGATTTGCCGGGGCTTAGGCCTTCGGCGGT TCCGCAACAAGGACCGGTCATCGTGCCGAAGCGCGACCTGGACCCGACGGCGACGAAGGCTGACATTGAGAGGGCATTGG CGGCAAACGATGCTTTCGTTGACAGCGATCGCAAGCTCGAACAGATGGCTGCAAGCGTCTACAAAGACCCGGTGCCCCTC ATAAAGGACATTCGAGAGGCGGCACTGACAGGTTCTATTGGCGATCAGTCAGTCGTCAAGCGCATCGATCTGGACCCGGA TTCCTACGGACCATACAAGGGCGCCGGCGGAATCTTTTCCAGCCAGCAGGAGAGGAAAGACTATCGCAATGCCACTGCCG CGCGATCCGGTTTGAAAGCCGGAGCGGAGCACCTGATTTCGACGGCTCATGGCATCCGCCAGGCTCTCGCCAACGAAAAG CAGCAGCTTGCGGAGCGGGATAAGATTGAAATCCGATTGCCGGACCCCGTGATGATGAATGCCATCGAGAAGAGCCAGCC ATTGTCTGACGCGCAGGCGGCCGAGATAGACAAGGCCATTCGTTCATTCGAACATCGTTTTGGCGATGATGTGGGCAAGG TGCGGACTGCCCTCAATCTCGCGCCTTTGGCTGAGAAGCATGGGCTCGATACCGAACAGCTCACCATGGCCCGCCAAGTC CTGAAAACGCTCGACAAAGGCCAGTCTCAAGCGCGCGAGCAGGCACAGGTCATCAAGCAGTCTCAGGGCCAAGCCAGGGG CGGTCCCACGCGGTAA
Upstream 100 bases:
>100_bases CATAGTTACGGCCCCCGGTAGCGCCATCGGTAAGAATGGCAATTTCGATCTTTTCTCGCATCCTGCAGATTCCCGTAGAG CTGTCGAGACGGCTCTGGAA
Downstream 100 bases:
>100_bases CCGGGCAGCCGGCGAGACAAAGAGTGGTCCAATGCCTTTGCAAAGCAGATAGCCATTCACTTTGAGCTCATCCGATAGAT CGCCACTGCCAATTTCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Filamentation Protein; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein A
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MAADKNTMRARPGEVMGYLAYAHPFLDGNGRTIMTLRAELCRRAGIHIDWSQTNKFDYLNALTKELDTPGKGHLDAYLKP FLRIEALDQAQSANMLRDLPGLRPSAVPQQGPVIVPKRDLDPTATKADIERALAANDAFVDSDRKLEQMAASVYKDPVPL IKDIREAALTGSIGDQSVVKRIDLDPDSYGPYKGAGGIFSSQQERKDYRNATAARSGLKAGAEHLISTAHGIRQALANEK QQLAERDKIEIRLPDPVMMNAIEKSQPLSDAQAAEIDKAIRSFEHRFGDDVGKVRTALNLAPLAEKHGLDTEQLTMARQV LKTLDKGQSQAREQAQVIKQSQGQARGGPTR
Sequences:
>Translated_351_residues MAADKNTMRARPGEVMGYLAYAHPFLDGNGRTIMTLRAELCRRAGIHIDWSQTNKFDYLNALTKELDTPGKGHLDAYLKP FLRIEALDQAQSANMLRDLPGLRPSAVPQQGPVIVPKRDLDPTATKADIERALAANDAFVDSDRKLEQMAASVYKDPVPL IKDIREAALTGSIGDQSVVKRIDLDPDSYGPYKGAGGIFSSQQERKDYRNATAARSGLKAGAEHLISTAHGIRQALANEK QQLAERDKIEIRLPDPVMMNAIEKSQPLSDAQAAEIDKAIRSFEHRFGDDVGKVRTALNLAPLAEKHGLDTEQLTMARQV LKTLDKGQSQAREQAQVIKQSQGQARGGPTR >Mature_350_residues AADKNTMRARPGEVMGYLAYAHPFLDGNGRTIMTLRAELCRRAGIHIDWSQTNKFDYLNALTKELDTPGKGHLDAYLKPF LRIEALDQAQSANMLRDLPGLRPSAVPQQGPVIVPKRDLDPTATKADIERALAANDAFVDSDRKLEQMAASVYKDPVPLI KDIREAALTGSIGDQSVVKRIDLDPDSYGPYKGAGGIFSSQQERKDYRNATAARSGLKAGAEHLISTAHGIRQALANEKQ QLAERDKIEIRLPDPVMMNAIEKSQPLSDAQAAEIDKAIRSFEHRFGDDVGKVRTALNLAPLAEKHGLDTEQLTMARQVL KTLDKGQSQAREQAQVIKQSQGQARGGPTR
Specific function: Unknown
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38539; Mature: 38408
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADKNTMRARPGEVMGYLAYAHPFLDGNGRTIMTLRAELCRRAGIHIDWSQTNKFDYLN CCCCCCCCCCCCHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHCCCEEECCCCCCHHHHH ALTKELDTPGKGHLDAYLKPFLRIEALDQAQSANMLRDLPGLRPSAVPQQGPVIVPKRDL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC DPTATKADIERALAANDAFVDSDRKLEQMAASVYKDPVPLIKDIREAALTGSIGDQSVVK CCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH RIDLDPDSYGPYKGAGGIFSSQQERKDYRNATAARSGLKAGAEHLISTAHGIRQALANEK HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQLAERDKIEIRLPDPVMMNAIEKSQPLSDAQAAEIDKAIRSFEHRFGDDVGKVRTALNL HHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH APLAEKHGLDTEQLTMARQVLKTLDKGQSQAREQAQVIKQSQGQARGGPTR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AADKNTMRARPGEVMGYLAYAHPFLDGNGRTIMTLRAELCRRAGIHIDWSQTNKFDYLN CCCCCCCCCCCHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHCCCEEECCCCCCHHHHH ALTKELDTPGKGHLDAYLKPFLRIEALDQAQSANMLRDLPGLRPSAVPQQGPVIVPKRDL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC DPTATKADIERALAANDAFVDSDRKLEQMAASVYKDPVPLIKDIREAALTGSIGDQSVVK CCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH RIDLDPDSYGPYKGAGGIFSSQQERKDYRNATAARSGLKAGAEHLISTAHGIRQALANEK HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQLAERDKIEIRLPDPVMMNAIEKSQPLSDAQAAEIDKAIRSFEHRFGDDVGKVRTALNL HHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH APLAEKHGLDTEQLTMARQVLKTLDKGQSQAREQAQVIKQSQGQARGGPTR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA