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The map label for this gene is parB [H]

Identifier: 222109158

GI number: 222109158

Start: 47213

End: 49003

Strand: Direct

Name: parB [H]

Synonym: Avi_9553

Alternate gene names: 222109158

Gene position: 47213-49003 (Clockwise)

Preceding gene: 222109154

Following gene: 222109159

Centisome position: 36.2

GC content: 62.2

Gene sequence:

>1791_bases
ATGCATATCGTCAGACTCGATCCGCGCGCATTGAAGGACAATCCGGACAGGACACGCCGGTCGCAATCATCGCCGCAATC
CGACGCCCTGATGCTGGCGACCATCAAGGCCGTCGGCATCATCCAGCCGCCTGTGGTCGCGCAGGAACGTGATGGCGGCA
ACGCCTACGTGATTGACGCCGGTCACCGCCGCGTCAAACAGGCGATCGCCGCCGGCCTTGAGGAAATCGAGGTTTTGGTC
GCGGACGCCAGCGACGACAACGGCGCCATGCGCGGCATGATCGAGAACATCGCCCGCGAGCCCCTTAACCCGGTCGATCA
ATGGCGCGGCATCGAGCGTCTCGTCGCGCTTGGATGGACCGAGGAGGCGATTGCCGTCGCACTCGCCCTGCCGGTACGGC
AGATCAGGAAGTTGCGACTTCTCGCCAACGTGCTGCCAGCCATGCTCGAACAGATGGCCAAGGGGGACATGCCGTCGGAG
CAGCAGCTTCGCACGATTGCGGCAGCCTCGCTCGAAGATCAGAAGGAAGTCTGGAAGGCGCAGAAGCCGAAGAAGGGGGA
CACCGCATCCTGGTGGGCGATCGCCAACGGGCTCAGCAAGACGCGCATGTATGCCAGGGATGCAAGCTTTGGTGAGGACC
TGGCACAGGCCTACGGTATCGCGTGGGTCGAGGACCTGTTCGCACCGGCCGACGAGGACAGCCGCTATACGACGGATGTC
GAAGCGTTCCTCGGCGCGCAGCAGGAGTGGATGACCAGCAACCTCCCTAAAAAGGGTGCCATCGTCGAGGTCAACAGCTG
GGGCCAGCCGCAGCTTCCGGCAAAGGCCGACCGTGTCTATGGCAAGCCAGGCAAAGGTGATTACACGGCGATGTACATCG
ATCGCGATGGCAAGGTCCAGTCGGTCCACTACCGGATGCCGGAAAGCAAAAAGACCAAGGCGAAGGGCGATACCGGTTCG
CCAGACGGGGATCTCGATGATGATGCCATCGCTGTCACCGCCAAGCCCCGTCCCGATGTGACGCAGAAGGGCCAGGACAT
GATCGGTGATTTCCGCACCGACGCCCTTCATGAGGCGCTCGGTCGCGCGCCGATCGAGGACGATATGCTGATGGCGTTGC
TCGTAATCGCCTTCGCCGGCCTGAATGTTCGGGTCGATACAGGTGCCGGTGGCGATGTCTACGGCACGAAACGGTTCAAC
GGCCACGTCGGCCCCCTGCTGGATGAAAACGGCAAGATCGACCTTGACACGGATAGACTGCGGGTCGCGGCACGTTCCGT
GCTGATCGACGTCCTGTCGTGCCGACGCAACAGTTCGAACAGCGGCATTGTCGCGCGTATCGCCGGAGACGCCATCGGTG
CGGACGCATTCCTGCCCAACATGGGCACCGAAGACTTCCTGTCATGCCTATCGCGCCATGCGCTCGAAACCTCCGCTGGG
CAAGCTGCCGTTGTACCTCGCCCCAAGGTCAAGGAAACCCGCGCGGCACTTGTAGACCATTTCAAGGAGGAGAGGTTCGT
CCATCCTACTGCCCTGTTTGCACCGGCCATGGAAGACCTCACCGCCTTGTTCAAGGCGGGCGCTGCTCCTGATGAGGATG
CCGATACCTCTTTCGGCACGGCTGAAGATGACATTGTCGAACACACCGCCCGCGATGCGGGGCGGGATGAGGACGATGTC
GTGGACCAGGCCGACTCTACGTCATCTGAAGCGGCCGCAAACGAGCCTGCCACTGATCCCCTGGTGGATGAGCCGTCGGT
CGATGACCATTACGGCATTGCGGCCGAATAG

Upstream 100 bases:

>100_bases
CCGGACCGACCGCTCCGCGGTTCGGGAGATGTCTTCGGGAAAAAAGAAGACGCGAGAAGGACCGGCAAAGGGCCGTGTCC
GCACCGAACAGGAGCATCCC

Downstream 100 bases:

>100_bases
CCGACTTTCATTCATTTTCTTTCCGATCGCCATCCCCGCCGCCGGTTTCCGGCGGCGGTTTTCTTTTCCACGCGTGCAAC
AAGGAGGACCGACATGTCCG

Product: plasmid partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MHIVRLDPRALKDNPDRTRRSQSSPQSDALMLATIKAVGIIQPPVVAQERDGGNAYVIDAGHRRVKQAIAAGLEEIEVLV
ADASDDNGAMRGMIENIAREPLNPVDQWRGIERLVALGWTEEAIAVALALPVRQIRKLRLLANVLPAMLEQMAKGDMPSE
QQLRTIAAASLEDQKEVWKAQKPKKGDTASWWAIANGLSKTRMYARDASFGEDLAQAYGIAWVEDLFAPADEDSRYTTDV
EAFLGAQQEWMTSNLPKKGAIVEVNSWGQPQLPAKADRVYGKPGKGDYTAMYIDRDGKVQSVHYRMPESKKTKAKGDTGS
PDGDLDDDAIAVTAKPRPDVTQKGQDMIGDFRTDALHEALGRAPIEDDMLMALLVIAFAGLNVRVDTGAGGDVYGTKRFN
GHVGPLLDENGKIDLDTDRLRVAARSVLIDVLSCRRNSSNSGIVARIAGDAIGADAFLPNMGTEDFLSCLSRHALETSAG
QAAVVPRPKVKETRAALVDHFKEERFVHPTALFAPAMEDLTALFKAGAAPDEDADTSFGTAEDDIVEHTARDAGRDEDDV
VDQADSTSSEAAANEPATDPLVDEPSVDDHYGIAAE

Sequences:

>Translated_596_residues
MHIVRLDPRALKDNPDRTRRSQSSPQSDALMLATIKAVGIIQPPVVAQERDGGNAYVIDAGHRRVKQAIAAGLEEIEVLV
ADASDDNGAMRGMIENIAREPLNPVDQWRGIERLVALGWTEEAIAVALALPVRQIRKLRLLANVLPAMLEQMAKGDMPSE
QQLRTIAAASLEDQKEVWKAQKPKKGDTASWWAIANGLSKTRMYARDASFGEDLAQAYGIAWVEDLFAPADEDSRYTTDV
EAFLGAQQEWMTSNLPKKGAIVEVNSWGQPQLPAKADRVYGKPGKGDYTAMYIDRDGKVQSVHYRMPESKKTKAKGDTGS
PDGDLDDDAIAVTAKPRPDVTQKGQDMIGDFRTDALHEALGRAPIEDDMLMALLVIAFAGLNVRVDTGAGGDVYGTKRFN
GHVGPLLDENGKIDLDTDRLRVAARSVLIDVLSCRRNSSNSGIVARIAGDAIGADAFLPNMGTEDFLSCLSRHALETSAG
QAAVVPRPKVKETRAALVDHFKEERFVHPTALFAPAMEDLTALFKAGAAPDEDADTSFGTAEDDIVEHTARDAGRDEDDV
VDQADSTSSEAAANEPATDPLVDEPSVDDHYGIAAE
>Mature_596_residues
MHIVRLDPRALKDNPDRTRRSQSSPQSDALMLATIKAVGIIQPPVVAQERDGGNAYVIDAGHRRVKQAIAAGLEEIEVLV
ADASDDNGAMRGMIENIAREPLNPVDQWRGIERLVALGWTEEAIAVALALPVRQIRKLRLLANVLPAMLEQMAKGDMPSE
QQLRTIAAASLEDQKEVWKAQKPKKGDTASWWAIANGLSKTRMYARDASFGEDLAQAYGIAWVEDLFAPADEDSRYTTDV
EAFLGAQQEWMTSNLPKKGAIVEVNSWGQPQLPAKADRVYGKPGKGDYTAMYIDRDGKVQSVHYRMPESKKTKAKGDTGS
PDGDLDDDAIAVTAKPRPDVTQKGQDMIGDFRTDALHEALGRAPIEDDMLMALLVIAFAGLNVRVDTGAGGDVYGTKRFN
GHVGPLLDENGKIDLDTDRLRVAARSVLIDVLSCRRNSSNSGIVARIAGDAIGADAFLPNMGTEDFLSCLSRHALETSAG
QAAVVPRPKVKETRAALVDHFKEERFVHPTALFAPAMEDLTALFKAGAAPDEDADTSFGTAEDDIVEHTARDAGRDEDDV
VDQADSTSSEAAANEPATDPLVDEPSVDDHYGIAAE

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 64481; Mature: 64481

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIVRLDPRALKDNPDRTRRSQSSPQSDALMLATIKAVGIIQPPVVAQERDGGNAYVIDA
CEEEECCCHHHCCCCHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCEEECCCCCEEEECC
GHRRVKQAIAAGLEEIEVLVADASDDNGAMRGMIENIAREPLNPVDQWRGIERLVALGWT
HHHHHHHHHHHCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
EEAIAVALALPVRQIRKLRLLANVLPAMLEQMAKGDMPSEQQLRTIAAASLEDQKEVWKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QKPKKGDTASWWAIANGLSKTRMYARDASFGEDLAQAYGIAWVEDLFAPADEDSRYTTDV
CCCCCCCCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
EAFLGAQQEWMTSNLPKKGAIVEVNSWGQPQLPAKADRVYGKPGKGDYTAMYIDRDGKVQ
HHHHCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEE
SVHYRMPESKKTKAKGDTGSPDGDLDDDAIAVTAKPRPDVTQKGQDMIGDFRTDALHEAL
EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHH
GRAPIEDDMLMALLVIAFAGLNVRVDTGAGGDVYGTKRFNGHVGPLLDENGKIDLDTDRL
CCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHH
RVAARSVLIDVLSCRRNSSNSGIVARIAGDAIGADAFLPNMGTEDFLSCLSRHALETSAG
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCC
QAAVVPRPKVKETRAALVDHFKEERFVHPTALFAPAMEDLTALFKAGAAPDEDADTSFGT
CEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AEDDIVEHTARDAGRDEDDVVDQADSTSSEAAANEPATDPLVDEPSVDDHYGIAAE
CHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIVRLDPRALKDNPDRTRRSQSSPQSDALMLATIKAVGIIQPPVVAQERDGGNAYVIDA
CEEEECCCHHHCCCCHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCEEECCCCCEEEECC
GHRRVKQAIAAGLEEIEVLVADASDDNGAMRGMIENIAREPLNPVDQWRGIERLVALGWT
HHHHHHHHHHHCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
EEAIAVALALPVRQIRKLRLLANVLPAMLEQMAKGDMPSEQQLRTIAAASLEDQKEVWKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
QKPKKGDTASWWAIANGLSKTRMYARDASFGEDLAQAYGIAWVEDLFAPADEDSRYTTDV
CCCCCCCCCHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
EAFLGAQQEWMTSNLPKKGAIVEVNSWGQPQLPAKADRVYGKPGKGDYTAMYIDRDGKVQ
HHHHCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEE
SVHYRMPESKKTKAKGDTGSPDGDLDDDAIAVTAKPRPDVTQKGQDMIGDFRTDALHEAL
EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHH
GRAPIEDDMLMALLVIAFAGLNVRVDTGAGGDVYGTKRFNGHVGPLLDENGKIDLDTDRL
CCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHH
RVAARSVLIDVLSCRRNSSNSGIVARIAGDAIGADAFLPNMGTEDFLSCLSRHALETSAG
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCC
QAAVVPRPKVKETRAALVDHFKEERFVHPTALFAPAMEDLTALFKAGAAPDEDADTSFGT
CEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AEDDIVEHTARDAGRDEDDVVDQADSTSSEAAANEPATDPLVDEPSVDDHYGIAAE
CHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]