Click here to switch to the map view.

The map label for this gene is 222109159

Identifier: 222109159

GI number: 222109159

Start: 49097

End: 49573

Strand: Direct

Name: 222109159

Synonym: Avi_9554

Alternate gene names: NA

Gene position: 49097-49573 (Clockwise)

Preceding gene: 222109158

Following gene: 222109160

Centisome position: 37.64

GC content: 62.26

Gene sequence:

>477_bases
ATGTCCGCACACGCAATTTTCGATCTCGCTCCGCTTGGCTCCATCGTTTCCTGGTCTGACGCGACCCCGCAACCACCGGA
GCGGCACAAGAAGAAGCTCTCGGCATGGAAGACGCGCAACAGCCAGGGTCGGCTGATCCGTAAGCACGGCGAAAGGACCA
CCGGCAGCTATGTCGCGCGGCCTGATTTCACCATCCACGAAGGTGACTTTGGCGGTAATGGCACGATCATCGTGCGCATC
CACCGCACCTTCTCGGTCGATTCCGAGCTGATCTTCAACGTCCTCGAGCGCCCGAGGACGGGTTCGGTCCGCATTTTCGA
TCGGGCGGGTGAGTATGCGGAGCTCGTACACCTCGCGGAAGACCGCGAAGCGGCTGAAGCATGGCTCAAACGTCACGGCT
ACCCGAACGCTGTCCTGGACGAGGTGACCGCCAACGAGGTCGCGGCCGACGTTATCGAGGGGAGGGCGGCGGCATGA

Upstream 100 bases:

>100_bases
CGAATAGCCGACTTTCATTCATTTTCTTTCCGATCGCCATCCCCGCCGCCGGTTTCCGGCGGCGGTTTTCTTTTCCACGC
GTGCAACAAGGAGGACCGAC

Downstream 100 bases:

>100_bases
TCAGGCCCACTGTTGAGACGGTCGAGCTACCCCCTCCTCGATATACAGGGGCGGGGTCCGGCCGAAGCGCAGACGATTGT
GTTGTGACTGTAACGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSAHAIFDLAPLGSIVSWSDATPQPPERHKKKLSAWKTRNSQGRLIRKHGERTTGSYVARPDFTIHEGDFGGNGTIIVRI
HRTFSVDSELIFNVLERPRTGSVRIFDRAGEYAELVHLAEDREAAEAWLKRHGYPNAVLDEVTANEVAADVIEGRAAA

Sequences:

>Translated_158_residues
MSAHAIFDLAPLGSIVSWSDATPQPPERHKKKLSAWKTRNSQGRLIRKHGERTTGSYVARPDFTIHEGDFGGNGTIIVRI
HRTFSVDSELIFNVLERPRTGSVRIFDRAGEYAELVHLAEDREAAEAWLKRHGYPNAVLDEVTANEVAADVIEGRAAA
>Mature_157_residues
SAHAIFDLAPLGSIVSWSDATPQPPERHKKKLSAWKTRNSQGRLIRKHGERTTGSYVARPDFTIHEGDFGGNGTIIVRIH
RTFSVDSELIFNVLERPRTGSVRIFDRAGEYAELVHLAEDREAAEAWLKRHGYPNAVLDEVTANEVAADVIEGRAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17543; Mature: 17412

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHAIFDLAPLGSIVSWSDATPQPPERHKKKLSAWKTRNSQGRLIRKHGERTTGSYVAR
CCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEC
PDFTIHEGDFGGNGTIIVRIHRTFSVDSELIFNVLERPRTGSVRIFDRAGEYAELVHLAE
CCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHC
DREAAEAWLKRHGYPNAVLDEVTANEVAADVIEGRAAA
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SAHAIFDLAPLGSIVSWSDATPQPPERHKKKLSAWKTRNSQGRLIRKHGERTTGSYVAR
CCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEC
PDFTIHEGDFGGNGTIIVRIHRTFSVDSELIFNVLERPRTGSVRIFDRAGEYAELVHLAE
CCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHC
DREAAEAWLKRHGYPNAVLDEVTANEVAADVIEGRAAA
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA