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The map label for this gene is ykwD [H]

Identifier: 221633736

GI number: 221633736

Start: 1769496

End: 1770482

Strand: Reverse

Name: ykwD [H]

Synonym: trd_1763

Alternate gene names: 221633736

Gene position: 1770482-1769496 (Counterclockwise)

Preceding gene: 221633737

Following gene: 221633732

Centisome position: 88.39

GC content: 61.2

Gene sequence:

>987_bases
ATGAAGCGATCGGCCTACGTCCTCCTAGCTCTCCTCGCTTTTATGCTCAGTCCTGTAGGTTCGACTCTAGCTGCGGCTTC
CACTCCCACTGGGTACGATGTCGCGCCCGAGTTCCAGAACTTTTACCAACGGTATGGGGGACTCCCGACATTCGGCTATC
CGATCAGCCCAGCCTTCCGGGAAAACGGCTATCTCGTCCAGTACTTTGAACGCCAACGCTTCGAGTACCACCCCGAGTAC
GCCGGCACCGAATACGAGGTGCTGCTCGGCCTGCTCGGCCGGGAGATGGCCGAACGCGAAGGTCGTGATCTGCGGCCCGT
ACAACCGATTCCTGGTCGACTCTATTTCCCGGAAACGGGACATACCATCGCCTCAGAGTTTCTGTCCTACTGGCAAAGCC
GTGGAGGCTTGCGGCTCTTCGGTTACCCCATCACGGAGCCCTTCTGGGAAAACGGCCTATTGATCCAGTACTTCGAGCGT
GCGCGTTTCGAATTTCGCCCTGACCTAGCAGGAACCGACTGGGCGATCCTGCTCGGCCGCCTGGGCGCTGAACTTTGGGC
GAGCAAGAGCCGCGACGCCTTCTACCAAAGAAGCACACCAGCGAGCGATCTTGCTGATCACATCAACCGGACGCGGCAAC
AGAGCGGGCTGGCTCCACTCGTGCTCGACCCCGTGCTCACCCGGATCGCGCAAGAGCGGAGCGATGACATGGCGCGCCGC
GGCTACTTCTCGCACACGACGCCAGAGGGTCGCACGGTCTTCGACCTGCTCGATGCTTACCGGGTCAACTGGCGTTTTGC
TGGTGAAACGCTGCAGCGCAACAACTACCCCGCCGACCGAACGGTTGCCGAGGCAGCTCGCTCGCTCTTCGCCAGTGCGT
CCCATCGTGCCATCCTGCTCGATCCGCGCTTCACCCACTTCGGGGTCGCCGAAGCGACCAGCCAGGATGGGATGCATTAC
TACACCGTCGTGCTCATCCAGCGCTGA

Upstream 100 bases:

>100_bases
TACCCGGCAATCACCCTTCTATCCCTCCCGGATAGCGTTTCGACGGCCGATCGCTTTTCTCGGCGGTCATGAGGGCCCCG
TGCTCGCGAGAGGTGTACTG

Downstream 100 bases:

>100_bases
GCGGTCAGTTCGGCACCTGCGCCGTACCCCAGCTCGTGGCGCGTCTCTACTCGGCGCGTTCAGCCCGCCGCTCGGCGACG
GGCGAGCACGCCGAGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKRSAYVLLALLAFMLSPVGSTLAAASTPTGYDVAPEFQNFYQRYGGLPTFGYPISPAFRENGYLVQYFERQRFEYHPEY
AGTEYEVLLGLLGREMAEREGRDLRPVQPIPGRLYFPETGHTIASEFLSYWQSRGGLRLFGYPITEPFWENGLLIQYFER
ARFEFRPDLAGTDWAILLGRLGAELWASKSRDAFYQRSTPASDLADHINRTRQQSGLAPLVLDPVLTRIAQERSDDMARR
GYFSHTTPEGRTVFDLLDAYRVNWRFAGETLQRNNYPADRTVAEAARSLFASASHRAILLDPRFTHFGVAEATSQDGMHY
YTVVLIQR

Sequences:

>Translated_328_residues
MKRSAYVLLALLAFMLSPVGSTLAAASTPTGYDVAPEFQNFYQRYGGLPTFGYPISPAFRENGYLVQYFERQRFEYHPEY
AGTEYEVLLGLLGREMAEREGRDLRPVQPIPGRLYFPETGHTIASEFLSYWQSRGGLRLFGYPITEPFWENGLLIQYFER
ARFEFRPDLAGTDWAILLGRLGAELWASKSRDAFYQRSTPASDLADHINRTRQQSGLAPLVLDPVLTRIAQERSDDMARR
GYFSHTTPEGRTVFDLLDAYRVNWRFAGETLQRNNYPADRTVAEAARSLFASASHRAILLDPRFTHFGVAEATSQDGMHY
YTVVLIQR
>Mature_328_residues
MKRSAYVLLALLAFMLSPVGSTLAAASTPTGYDVAPEFQNFYQRYGGLPTFGYPISPAFRENGYLVQYFERQRFEYHPEY
AGTEYEVLLGLLGREMAEREGRDLRPVQPIPGRLYFPETGHTIASEFLSYWQSRGGLRLFGYPITEPFWENGLLIQYFER
ARFEFRPDLAGTDWAILLGRLGAELWASKSRDAFYQRSTPASDLADHINRTRQQSGLAPLVLDPVLTRIAQERSDDMARR
GYFSHTTPEGRTVFDLLDAYRVNWRFAGETLQRNNYPADRTVAEAARSLFASASHRAILLDPRFTHFGVAEATSQDGMHY
YTVVLIQR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 37474; Mature: 37474

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSAYVLLALLAFMLSPVGSTLAAASTPTGYDVAPEFQNFYQRYGGLPTFGYPISPAFR
CCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH
ENGYLVQYFERQRFEYHPEYAGTEYEVLLGLLGREMAEREGRDLRPVQPIPGRLYFPETG
CCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCC
HTIASEFLSYWQSRGGLRLFGYPITEPFWENGLLIQYFERARFEFRPDLAGTDWAILLGR
HHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LGAELWASKSRDAFYQRSTPASDLADHINRTRQQSGLAPLVLDPVLTRIAQERSDDMARR
HHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GYFSHTTPEGRTVFDLLDAYRVNWRFAGETLQRNNYPADRTVAEAARSLFASASHRAILL
CCCCCCCCCCCHHHHHHHHHHCCEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEE
DPRFTHFGVAEATSQDGMHYYTVVLIQR
CCCCCCCCCHHHHCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKRSAYVLLALLAFMLSPVGSTLAAASTPTGYDVAPEFQNFYQRYGGLPTFGYPISPAFR
CCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH
ENGYLVQYFERQRFEYHPEYAGTEYEVLLGLLGREMAEREGRDLRPVQPIPGRLYFPETG
CCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCC
HTIASEFLSYWQSRGGLRLFGYPITEPFWENGLLIQYFERARFEFRPDLAGTDWAILLGR
HHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LGAELWASKSRDAFYQRSTPASDLADHINRTRQQSGLAPLVLDPVLTRIAQERSDDMARR
HHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GYFSHTTPEGRTVFDLLDAYRVNWRFAGETLQRNNYPADRTVAEAARSLFASASHRAILL
CCCCCCCCCCCHHHHHHHHHHCCEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEE
DPRFTHFGVAEATSQDGMHYYTVVLIQR
CCCCCCCCCHHHHCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]