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The map label for this gene is ycfX [C]

Identifier: 221232412

GI number: 221232412

Start: 1615547

End: 1616431

Strand: Reverse

Name: ycfX [C]

Synonym: SPN23F_16760

Alternate gene names: 221232412

Gene position: 1616431-1615547 (Counterclockwise)

Preceding gene: 221232413

Following gene: 221232410

Centisome position: 72.77

GC content: 44.29

Gene sequence:

>885_bases
ATGACATACTACGTTGCAATTGATATCGGTGGAACTAACATCAAGTATGGTTTGGTTGATCAAGAGGGGCAACTTCTTGA
ATCACATGAAATGCCAACAGAGGCGCATAAGGGTGGACCTCATATCTTACAAAAGACCAAAGATATCGTAGCTAGTTATT
TAGAAAAAGGCCCAGTAGCAGGTGTTGCCATATCTTCTGCTGGGATGGTGGATCCGGATAAGGGTGAGATTTTCTATGCT
GGGCCGCAAATCCCTAACTACGCAGGCACCCAGTTCAAAAAGGAAATCGAAGAAAGCTTTGCTATTCCTTGTGAGATTGA
AAATGATGTCAACTGTGCAGGTCTGGCTGAGGCAGTATCTGGTTCAGGTAAGGGAGCAAGTGTCACCCTTTGCTTGACCA
TTGGAACAGGTATTGGTGGTTGTTTGATTATGGATGGGAAAGTCTTCCATGGATTTAGCAATTCAGCCTGTGAAGTTGGT
TATATGCATATGCAGGATGGAGCGTTTCAAGATTTGGCTTCTACAACAGCCTTGGTGGAGTATGTAGCAGCAGCTCATGG
AGATCCAGTTGACCAGTGGAATGGTCGTCGTATCTTTAAGGAAGCTACGGAAGGCAATAAATTCTGCATGGAAGGTATTG
ACCGCATGGTAGACTATCTAGGAAAAGGTCTGGCAAATATTTGCTACGTTGCCAATCCAGAAGTGGTCATTCTCGGTGGC
GGTATCATGGGACAAGAGGCGATTCTCAAACCGAAAATCCGCACAGCCTTGAAAGAGGCTTTGGTACCAAGTTTGGCTGA
GAAAACAAGATTAGAATTCGCCAAGCACCAAAATACCGCAGGCATGTTGGGTGCTTATTATCATTTTAAAACAAAACAAT
CCTAG

Upstream 100 bases:

>100_bases
TGACACCAGTGACTGAAGACGATCGTCCAGTTGTAGAAGCGGCTGCAGCCTTGATTCGTGAAACCAAGGAGCGCTTCCTC
TAATCTAAAAGGAGGTATTT

Downstream 100 bases:

>100_bases
TTTGGCTTAGCCAAACTAGGATTTTCTGACACGTTTTTGTCTACGATAGCCGTTGAGTTTCTTATTTTCCCAATAGCTAT
TAAAGATTTTCTCCTTGCTT

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTYYVAIDIGGTNIKYGLVDQEGQLLESHEMPTEAHKGGPHILQKTKDIVASYLEKGPVAGVAISSAGMVDPDKGEIFYA
GPQIPNYAGTQFKKEIEESFAIPCEIENDVNCAGLAEAVSGSGKGASVTLCLTIGTGIGGCLIMDGKVFHGFSNSACEVG
YMHMQDGAFQDLASTTALVEYVAAAHGDPVDQWNGRRIFKEATEGNKFCMEGIDRMVDYLGKGLANICYVANPEVVILGG
GIMGQEAILKPKIRTALKEALVPSLAEKTRLEFAKHQNTAGMLGAYYHFKTKQS

Sequences:

>Translated_294_residues
MTYYVAIDIGGTNIKYGLVDQEGQLLESHEMPTEAHKGGPHILQKTKDIVASYLEKGPVAGVAISSAGMVDPDKGEIFYA
GPQIPNYAGTQFKKEIEESFAIPCEIENDVNCAGLAEAVSGSGKGASVTLCLTIGTGIGGCLIMDGKVFHGFSNSACEVG
YMHMQDGAFQDLASTTALVEYVAAAHGDPVDQWNGRRIFKEATEGNKFCMEGIDRMVDYLGKGLANICYVANPEVVILGG
GIMGQEAILKPKIRTALKEALVPSLAEKTRLEFAKHQNTAGMLGAYYHFKTKQS
>Mature_293_residues
TYYVAIDIGGTNIKYGLVDQEGQLLESHEMPTEAHKGGPHILQKTKDIVASYLEKGPVAGVAISSAGMVDPDKGEIFYAG
PQIPNYAGTQFKKEIEESFAIPCEIENDVNCAGLAEAVSGSGKGASVTLCLTIGTGIGGCLIMDGKVFHGFSNSACEVGY
MHMQDGAFQDLASTTALVEYVAAAHGDPVDQWNGRRIFKEATEGNKFCMEGIDRMVDYLGKGLANICYVANPEVVILGGG
IMGQEAILKPKIRTALKEALVPSLAEKTRLEFAKHQNTAGMLGAYYHFKTKQS

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566315, Length=260, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI190014632, Length=260, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI298566325, Length=260, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI4885285, Length=260, Percent_Identity=27.6923076923077, Blast_Score=78, Evalue=9e-15,
Organism=Escherichia coli, GI1787363, Length=302, Percent_Identity=26.4900662251656, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1786891, Length=276, Percent_Identity=22.1014492753623, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787878, Length=311, Percent_Identity=21.5434083601286, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87081733, Length=309, Percent_Identity=22.3300970873786, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 31423; Mature: 31292

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYYVAIDIGGTNIKYGLVDQEGQLLESHEMPTEAHKGGPHILQKTKDIVASYLEKGPVA
CEEEEEEEECCCEEEEEEECCCCCHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCC
GVAISSAGMVDPDKGEIFYAGPQIPNYAGTQFKKEIEESFAIPCEIENDVNCAGLAEAVS
EEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHC
GSGKGASVTLCLTIGTGIGGCLIMDGKVFHGFSNSACEVGYMHMQDGAFQDLASTTALVE
CCCCCCEEEEEEEECCCCCEEEEECCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHH
YVAAAHGDPVDQWNGRRIFKEATEGNKFCMEGIDRMVDYLGKGLANICYVANPEVVILGG
HHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEC
GIMGQEAILKPKIRTALKEALVPSLAEKTRLEFAKHQNTAGMLGAYYHFKTKQS
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCC
>Mature Secondary Structure 
TYYVAIDIGGTNIKYGLVDQEGQLLESHEMPTEAHKGGPHILQKTKDIVASYLEKGPVA
EEEEEEEECCCEEEEEEECCCCCHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCC
GVAISSAGMVDPDKGEIFYAGPQIPNYAGTQFKKEIEESFAIPCEIENDVNCAGLAEAVS
EEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHC
GSGKGASVTLCLTIGTGIGGCLIMDGKVFHGFSNSACEVGYMHMQDGAFQDLASTTALVE
CCCCCCEEEEEEEECCCCCEEEEECCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHH
YVAAAHGDPVDQWNGRRIFKEATEGNKFCMEGIDRMVDYLGKGLANICYVANPEVVILGG
HHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCEEEEEC
GIMGQEAILKPKIRTALKEALVPSLAEKTRLEFAKHQNTAGMLGAYYHFKTKQS
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]