Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
---|---|
Accession | NC_011900 |
Length | 2,221,315 |
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The map label for this gene is pepO
Identifier: 221232386
GI number: 221232386
Start: 1585122
End: 1587014
Strand: Reverse
Name: pepO
Synonym: SPN23F_16490
Alternate gene names: NA
Gene position: 1587014-1585122 (Counterclockwise)
Preceding gene: 221232391
Following gene: 221232384
Centisome position: 71.44
GC content: 44.69
Gene sequence:
>1893_bases ATGACACGTTATCAAGATGATTTTTATGATGCTATCAATGGAGAATGGCAACAGACAGCTGAAATCCCAGCAGATAAGTC TCAAACAGGAGGTTTTGTTGATTTAGACCAGGAAATTGAAGACCTGATGCTGGCGACAACAGACAAGTGGTTAGCAGGTG AAGAAGTGCCTGAGGATGCTATCTTGGAAAACTTTGTCAAATACCACCGCCTAGTTCGTGATTTTGACAAGAGAGAAGCT GACGGTATCACACCTGTCTTACCACTCCTTAAAGAATTCCAAGAATTGGAAACTTTTGCGGATTTTACAGCTAAACTAGC AGAGTTTGAGCTTGCAGGAAAACCAAACTTCCTTCCTTTTGGTGTATCGCCAGACTTTATGGATGCTAGAATCAATGTTC TATGGGCTAGCGCTCCAAGCACAATCTTGCCAGATACGACCTACTATGCAGAAGAACATCCTCAGCGCGAAGAGCTCTTG ACTCTTTGGAAAGAAAGCAGCGCAAATCTCCTCAAGGCTTATGATTTCTCTGATGAAGAAATTGAAGACTTGCTAGAAAA AAGACTTGAATTGGACCGCCGAGTTGTGGCAGTGGTGCTCTCTAATGAAGAAAGTTCAGAATATGCTAAACTCTATCATC CATATTCTTACGAAGATTTCAAGAAATTCGCGCCTGCCCTACCTTTGGATGACTTCTTCAAAGCAGTTATTGGGCAATTA CCAGACAAGGTTATTGTAGACGAGGAACGTTTCTGGCAAGCAGCAGAGCAATTTTACAGTGAGGAAGCCTGGTCTCTCCT TAAAGCAACCTTGATTTTGAGTGTTGTCAATCTTTCAACCAGCTATTTAACAGAGGATATCCGTGTTTTGTCTGGTGCCT ACAGCCGTGCCCTTTCTGGAGTTCCAGAGGCAAAAGATAAGGTCAAAGCAGCTTATCATCTAGCACAGGAACCTTTCAAG CAAGCCCTGGGGCTTTGGTACGCCCGTGAGAAGTTCTCTCCAGAAGCCAAGGCGGATGTGGAGAAAAAAGTGGCAACCAT GATTGATGTCTATAAGGAGCGTCTGCTTAAGAATGACTGGCTCACTCCAGAAACCTGTAAACAGGCTATCGTGAAGCTCA ATGTGATCAAACCTTATATTGGCTATCCAGAAGAATTGCCTGCACGTTACAAGGATAAGGTAGTGAATGAAACTGCCAGT CTTTTTGAGAATGCTCTAGCCTTTGCGCGTGTGGAAATCAAGCACAGTTGGAGTAAGTGGAACCAGCCTGTAGACTATAA GGAATGGGGCATGCCTGCTCATATGGTCAATGCCTACTACAATCCTCAGAAGAACCTGATTGTCTTTCCAGCGGCCATTT TACAGGCGCCTTTCTATGACTTGCATCAGTCATCTTCTGCTAACTACGGTGGTATTGGGGCAGTGATTGCCCATGAAATT TCCCACGCCTTTGATACTAACGGGGCTTCCTTTGACGAAAATGGTAGCCTCAAGGATTGGTGGACAGAGAGCGACTATGC TGCCTTCAAGGAGAAAACACAAAAAGTCATTGACCAATTTGATGGACAGGATTCTTATGGAGCAACCATTAACGGTAAAT TGACTGTATCAGAAAACGTGGCTGACTTGGGAGGAATCGCAGCAGCGCTTGAAGCAGCTAAGAGAGAAGCAGACTTCTCA GCAGAAGAGTTCTTCTACAACTTCGGTCGCATCTGGCGCATGAAAGGTCGACCAGAATTTATGAAACTTTTGGCTAGCGT CGATGTGCACGCACCAGCCAAACTCCGTGTCAATGTGCAAGTACCAAACTTCGACGATTTCTTTACAACCTATGATGTCA AAGAAGGAGACGGAATGTGGCGTTCACCAGAGGAGCGCGTGATTATTTGGTAA
Upstream 100 bases:
>100_bases TTTTATAATAGCTAAAAAATAATAGTTAAATGGTTATTAATTGCATTCCCTAGTGATTTTTGTTAAGATAAATGCAAATA CAAATGAAAGCGAGAACAAG
Downstream 100 bases:
>100_bases TACAAAAAATCTAGTCATCAGAAAAAAGGCATCCAATCACGTGTGAAAACCTTGATAGGATGCCTTTTGTAATAGAAAGA TTTGCTGGATAGTTTACTTA
Product: endopeptidase O
Products: NA
Alternate protein names: ORF6 [H]
Number of amino acids: Translated: 630; Mature: 629
Protein sequence:
>630_residues MTRYQDDFYDAINGEWQQTAEIPADKSQTGGFVDLDQEIEDLMLATTDKWLAGEEVPEDAILENFVKYHRLVRDFDKREA DGITPVLPLLKEFQELETFADFTAKLAEFELAGKPNFLPFGVSPDFMDARINVLWASAPSTILPDTTYYAEEHPQREELL TLWKESSANLLKAYDFSDEEIEDLLEKRLELDRRVVAVVLSNEESSEYAKLYHPYSYEDFKKFAPALPLDDFFKAVIGQL PDKVIVDEERFWQAAEQFYSEEAWSLLKATLILSVVNLSTSYLTEDIRVLSGAYSRALSGVPEAKDKVKAAYHLAQEPFK QALGLWYAREKFSPEAKADVEKKVATMIDVYKERLLKNDWLTPETCKQAIVKLNVIKPYIGYPEELPARYKDKVVNETAS LFENALAFARVEIKHSWSKWNQPVDYKEWGMPAHMVNAYYNPQKNLIVFPAAILQAPFYDLHQSSSANYGGIGAVIAHEI SHAFDTNGASFDENGSLKDWWTESDYAAFKEKTQKVIDQFDGQDSYGATINGKLTVSENVADLGGIAAALEAAKREADFS AEEFFYNFGRIWRMKGRPEFMKLLASVDVHAPAKLRVNVQVPNFDDFFTTYDVKEGDGMWRSPEERVIIW
Sequences:
>Translated_630_residues MTRYQDDFYDAINGEWQQTAEIPADKSQTGGFVDLDQEIEDLMLATTDKWLAGEEVPEDAILENFVKYHRLVRDFDKREA DGITPVLPLLKEFQELETFADFTAKLAEFELAGKPNFLPFGVSPDFMDARINVLWASAPSTILPDTTYYAEEHPQREELL TLWKESSANLLKAYDFSDEEIEDLLEKRLELDRRVVAVVLSNEESSEYAKLYHPYSYEDFKKFAPALPLDDFFKAVIGQL PDKVIVDEERFWQAAEQFYSEEAWSLLKATLILSVVNLSTSYLTEDIRVLSGAYSRALSGVPEAKDKVKAAYHLAQEPFK QALGLWYAREKFSPEAKADVEKKVATMIDVYKERLLKNDWLTPETCKQAIVKLNVIKPYIGYPEELPARYKDKVVNETAS LFENALAFARVEIKHSWSKWNQPVDYKEWGMPAHMVNAYYNPQKNLIVFPAAILQAPFYDLHQSSSANYGGIGAVIAHEI SHAFDTNGASFDENGSLKDWWTESDYAAFKEKTQKVIDQFDGQDSYGATINGKLTVSENVADLGGIAAALEAAKREADFS AEEFFYNFGRIWRMKGRPEFMKLLASVDVHAPAKLRVNVQVPNFDDFFTTYDVKEGDGMWRSPEERVIIW >Mature_629_residues TRYQDDFYDAINGEWQQTAEIPADKSQTGGFVDLDQEIEDLMLATTDKWLAGEEVPEDAILENFVKYHRLVRDFDKREAD GITPVLPLLKEFQELETFADFTAKLAEFELAGKPNFLPFGVSPDFMDARINVLWASAPSTILPDTTYYAEEHPQREELLT LWKESSANLLKAYDFSDEEIEDLLEKRLELDRRVVAVVLSNEESSEYAKLYHPYSYEDFKKFAPALPLDDFFKAVIGQLP DKVIVDEERFWQAAEQFYSEEAWSLLKATLILSVVNLSTSYLTEDIRVLSGAYSRALSGVPEAKDKVKAAYHLAQEPFKQ ALGLWYAREKFSPEAKADVEKKVATMIDVYKERLLKNDWLTPETCKQAIVKLNVIKPYIGYPEELPARYKDKVVNETASL FENALAFARVEIKHSWSKWNQPVDYKEWGMPAHMVNAYYNPQKNLIVFPAAILQAPFYDLHQSSSANYGGIGAVIAHEIS HAFDTNGASFDENGSLKDWWTESDYAAFKEKTQKVIDQFDGQDSYGATINGKLTVSENVADLGGIAAALEAAKREADFSA EEFFYNFGRIWRMKGRPEFMKLLASVDVHAPAKLRVNVQVPNFDDFFTTYDVKEGDGMWRSPEERVIIW
Specific function: Unknown
COG id: COG3590
COG function: function code O; Predicted metalloendopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M13 family [H]
Homologues:
Organism=Homo sapiens, GI239049391, Length=679, Percent_Identity=27.540500736377, Blast_Score=210, Evalue=4e-54, Organism=Homo sapiens, GI164519140, Length=663, Percent_Identity=25.9426847662142, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI4503443, Length=663, Percent_Identity=25.9426847662142, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI164519136, Length=663, Percent_Identity=25.9426847662142, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI164519138, Length=663, Percent_Identity=25.9426847662142, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI157426891, Length=665, Percent_Identity=25.5639097744361, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI116256333, Length=683, Percent_Identity=26.7935578330893, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI116256331, Length=683, Percent_Identity=26.7935578330893, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI116256329, Length=683, Percent_Identity=26.7935578330893, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI116256327, Length=683, Percent_Identity=26.7935578330893, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI153945761, Length=542, Percent_Identity=26.9372693726937, Blast_Score=199, Evalue=9e-51, Organism=Homo sapiens, GI153945836, Length=542, Percent_Identity=26.9372693726937, Blast_Score=199, Evalue=1e-50, Organism=Homo sapiens, GI82617560, Length=542, Percent_Identity=26.9372693726937, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI153945771, Length=542, Percent_Identity=26.9372693726937, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI90403592, Length=573, Percent_Identity=23.2111692844677, Blast_Score=136, Evalue=7e-32, Organism=Homo sapiens, GI4557691, Length=482, Percent_Identity=24.6887966804979, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI86562497, Length=680, Percent_Identity=24.1176470588235, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI25148650, Length=701, Percent_Identity=25.2496433666191, Blast_Score=175, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17533333, Length=484, Percent_Identity=24.5867768595041, Blast_Score=172, Evalue=6e-43, Organism=Caenorhabditis elegans, GI32563993, Length=403, Percent_Identity=25.8064516129032, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71987442, Length=541, Percent_Identity=24.9537892791128, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17564342, Length=319, Percent_Identity=30.0940438871473, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17534401, Length=372, Percent_Identity=26.8817204301075, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17533319, Length=488, Percent_Identity=24.3852459016393, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17570047, Length=382, Percent_Identity=24.0837696335079, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71994787, Length=316, Percent_Identity=26.8987341772152, Blast_Score=102, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71988640, Length=325, Percent_Identity=26.7692307692308, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71998977, Length=200, Percent_Identity=32.5, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71998975, Length=200, Percent_Identity=32.5, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17532485, Length=315, Percent_Identity=27.6190476190476, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71986886, Length=204, Percent_Identity=28.4313725490196, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193204436, Length=313, Percent_Identity=23.6421725239617, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17534885, Length=338, Percent_Identity=23.3727810650888, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643425, Length=666, Percent_Identity=26.5765765765766, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24640050, Length=670, Percent_Identity=25.9701492537313, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI24640052, Length=670, Percent_Identity=25.9701492537313, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI17737761, Length=472, Percent_Identity=27.9661016949153, Blast_Score=188, Evalue=9e-48, Organism=Drosophila melanogaster, GI45551938, Length=542, Percent_Identity=25.830258302583, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI45550777, Length=541, Percent_Identity=25.3234750462107, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI24650487, Length=407, Percent_Identity=26.044226044226, Blast_Score=139, Evalue=9e-33, Organism=Drosophila melanogaster, GI221474862, Length=342, Percent_Identity=28.3625730994152, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24650765, Length=333, Percent_Identity=29.4294294294294, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24650889, Length=680, Percent_Identity=21.1764705882353, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI21355943, Length=329, Percent_Identity=24.9240121580547, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI281362760, Length=212, Percent_Identity=28.7735849056604, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI24650885, Length=545, Percent_Identity=23.8532110091743, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24641622, Length=244, Percent_Identity=27.4590163934426, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI24649148, Length=348, Percent_Identity=21.551724137931, Blast_Score=66, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000718 - InterPro: IPR018497 - InterPro: IPR008753 [H]
Pfam domain/function: PF01431 Peptidase_M13; PF05649 Peptidase_M13_N [H]
EC number: NA
Molecular weight: Translated: 71927; Mature: 71796
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYQDDFYDAINGEWQQTAEIPADKSQTGGFVDLDQEIEDLMLATTDKWLAGEEVPEDA CCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCHHH ILENFVKYHRLVRDFDKREADGITPVLPLLKEFQELETFADFTAKLAEFELAGKPNFLPF HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEC GVSPDFMDARINVLWASAPSTILPDTTYYAEEHPQREELLTLWKESSANLLKAYDFSDEE CCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEECCCCHHH IEDLLEKRLELDRRVVAVVLSNEESSEYAKLYHPYSYEDFKKFAPALPLDDFFKAVIGQL HHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHC PDKVIVDEERFWQAAEQFYSEEAWSLLKATLILSVVNLSTSYLTEDIRVLSGAYSRALSG CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPEAKDKVKAAYHLAQEPFKQALGLWYAREKFSPEAKADVEKKVATMIDVYKERLLKNDW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LTPETCKQAIVKLNVIKPYIGYPEELPARYKDKVVNETASLFENALAFARVEIKHSWSKW CCHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQPVDYKEWGMPAHMVNAYYNPQKNLIVFPAAILQAPFYDLHQSSSANYGGIGAVIAHEI CCCCCHHHHCCCHHHHHHEECCCCCEEEECHHHHHCCCHHHHCCCCCCCCCHHHHHHHHH SHAFDTNGASFDENGSLKDWWTESDYAAFKEKTQKVIDQFDGQDSYGATINGKLTVSENV HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEECCCH ADLGGIAAALEAAKREADFSAEEFFYNFGRIWRMKGRPEFMKLLASVDVHAPAKLRVNVQ HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCEEEEEEE VPNFDDFFTTYDVKEGDGMWRSPEERVIIW CCCCCCCCEEECCCCCCCCCCCCCCCEEEC >Mature Secondary Structure TRYQDDFYDAINGEWQQTAEIPADKSQTGGFVDLDQEIEDLMLATTDKWLAGEEVPEDA CCCCHHHHHHHCCCHHHHHCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCHHH ILENFVKYHRLVRDFDKREADGITPVLPLLKEFQELETFADFTAKLAEFELAGKPNFLPF HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEC GVSPDFMDARINVLWASAPSTILPDTTYYAEEHPQREELLTLWKESSANLLKAYDFSDEE CCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEECCCCHHH IEDLLEKRLELDRRVVAVVLSNEESSEYAKLYHPYSYEDFKKFAPALPLDDFFKAVIGQL HHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHC PDKVIVDEERFWQAAEQFYSEEAWSLLKATLILSVVNLSTSYLTEDIRVLSGAYSRALSG CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPEAKDKVKAAYHLAQEPFKQALGLWYAREKFSPEAKADVEKKVATMIDVYKERLLKNDW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LTPETCKQAIVKLNVIKPYIGYPEELPARYKDKVVNETASLFENALAFARVEIKHSWSKW CCHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQPVDYKEWGMPAHMVNAYYNPQKNLIVFPAAILQAPFYDLHQSSSANYGGIGAVIAHEI CCCCCHHHHCCCHHHHHHEECCCCCEEEECHHHHHCCCHHHHCCCCCCCCCHHHHHHHHH SHAFDTNGASFDENGSLKDWWTESDYAAFKEKTQKVIDQFDGQDSYGATINGKLTVSENV HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEECCCH ADLGGIAAALEAAKREADFSAEEFFYNFGRIWRMKGRPEFMKLLASVDVHAPAKLRVNVQ HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCEEEEEEE VPNFDDFFTTYDVKEGDGMWRSPEERVIIW CCCCCCCCEEECCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7927711 [H]