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The map label for this gene is 220932560

Identifier: 220932560

GI number: 220932560

Start: 1839922

End: 1841550

Strand: Direct

Name: 220932560

Synonym: Hore_17240

Alternate gene names: NA

Gene position: 1839922-1841550 (Clockwise)

Preceding gene: 220932437

Following gene: 220932562

Centisome position: 71.37

GC content: 43.77

Gene sequence:

>1629_bases
ATGAAAACCAGCAGTATCAGAACAGCCCTCATCGATGGTTATCTGGACGAGCCCTCCTGTCTGGGGGTACCACCATATAT
TTCCCCGGAGATCAGATACACCTATGGATCCCTGTTAGACTGTGGACTCAGGGAAGAAAATATTAAATACTATACCATAG
ATGAACTCAGGGGAGATTGGGAAAAATCCATCGAAGACCTTGAACATTATGACCTGGTTATTATTGTTGCCGGGACCACC
GTTCCCGGCCATTACCTGGGGGGAAAGCCTATTTCCTTTAAGGAAATAAATGAACTGGGTTCAAAGCTATATTATCCCCA
GAAGGTTATCGGAGGACCGGTAACCCTGGTTAAAAAGGATTTTAACGGGTTTGACCTTGTCTGTGACGAGATTACAGCAA
TTAACCTGTATGAAGCCCTGAAAGATAAAGAAGTAAACCCCTCAACCCTGAATAAATCGATTGCCAACTGGGCCGTCAAG
GGGGCCAGTTTAACTATAAAGCACCCTGACTATCCCCATCTTATCTGTGAAATTGAAACCTTCCGGGGCTGCCCCCGGTC
CCGGCATTGCGCCTTCTGTAGTGAACGCCTAAAACAGAGGACATACCAGAGGTCACCTGAAGAAATTATTGCTGAAGTTA
AGGAACTGGCACAATATGGTAACCATTTTTACCGACTGGGGTGTCAAACAGACCTGTTATTATACCAGTCAACCCGGCTA
AATGGGAAACTGATGCCCAATCCTGATGCCATTGAGGAACTCTACCGGGGGATAAGGAAAGCTGACCCTGATCTGGAAGT
CCTTCATCTTGATAACATAAATCCATATAATCTAGTTCAATATGAAAAGGAAAGTGAACAGATTTTAAAAACAATTACCC
GGTACAATACACCCGGGGATATTGCGGCCTTTGGCCTGGAATCAGCTGACCCCCTTGTCCTTGAGAAAAACAATATTGAA
ACTGATCCTGAAACCACTTATAGGGCAGTTGCAATGATGAATGAAATAGGTGGGTACCGGGAAAATGGTTTACCAAAACT
CCTCCCGGGAATTAACTTTCTCCATGGGTTAATCGGGGAGCGTAAAGAAACCTTTGATTACAACTATAATTTTCTCAAAA
GATTACTGGACCAGGGGTTGATGTTAAGAAGGATTAATATAAGGCAGGTAGTGACCCTCGGTAAATACCCCAGAATAAAG
ATAGACCGGGGTAAGTTTCTGGAATATAAAGAAAGGGTCAACCGGAATATAAACCATCCTATGCTGAAAAGGGTTTTCCC
CCGGGGAACCATTATGAAACGGGTGTTGACGGAAAAGATAAGGGGTAAAATTACTTACGGCCGCCAGCTGGGTAGTTACC
CCATCCTTATCGGAATCCCGGGGAAACTTAAACTGAACAGATTTGTTGATGTCAGGGTTATTGATCATGGGTACCGCTCC
ATAACAGCCCTGCCCTGGCCTTTTAAAATTAAAGAAGCGACCCCGGAGCAGTTAATGACTATACCGGGTATTGGCAAAAA
AACAGCCAGTAATATTTTTATTGAAAAACCCGGTAACCCTGACCATCTATTAAAACTATTACCCGATGATTTCCCCTATC
AAGAATGGAAAGACTGGTTTACTTTCTAA

Upstream 100 bases:

>100_bases
TTTTACCCTGTTTTATAATATAATAATTCTTGAAGAATCCTCTGAAACCTGCTGTCATTATCTGGTAAAAGGACTAATAA
ATACTTGTAAGGGTGATATT

Downstream 100 bases:

>100_bases
TATATCAATACCCACGGCTATAATTGACCCGGTTAATTAAATCTTCACCTTTCTGATACCTCTTTAGATTTTTTATAAAA
ATTTCTATCGCCTCTTCATT

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKTSSIRTALIDGYLDEPSCLGVPPYISPEIRYTYGSLLDCGLREENIKYYTIDELRGDWEKSIEDLEHYDLVIIVAGTT
VPGHYLGGKPISFKEINELGSKLYYPQKVIGGPVTLVKKDFNGFDLVCDEITAINLYEALKDKEVNPSTLNKSIANWAVK
GASLTIKHPDYPHLICEIETFRGCPRSRHCAFCSERLKQRTYQRSPEEIIAEVKELAQYGNHFYRLGCQTDLLLYQSTRL
NGKLMPNPDAIEELYRGIRKADPDLEVLHLDNINPYNLVQYEKESEQILKTITRYNTPGDIAAFGLESADPLVLEKNNIE
TDPETTYRAVAMMNEIGGYRENGLPKLLPGINFLHGLIGERKETFDYNYNFLKRLLDQGLMLRRINIRQVVTLGKYPRIK
IDRGKFLEYKERVNRNINHPMLKRVFPRGTIMKRVLTEKIRGKITYGRQLGSYPILIGIPGKLKLNRFVDVRVIDHGYRS
ITALPWPFKIKEATPEQLMTIPGIGKKTASNIFIEKPGNPDHLLKLLPDDFPYQEWKDWFTF

Sequences:

>Translated_542_residues
MKTSSIRTALIDGYLDEPSCLGVPPYISPEIRYTYGSLLDCGLREENIKYYTIDELRGDWEKSIEDLEHYDLVIIVAGTT
VPGHYLGGKPISFKEINELGSKLYYPQKVIGGPVTLVKKDFNGFDLVCDEITAINLYEALKDKEVNPSTLNKSIANWAVK
GASLTIKHPDYPHLICEIETFRGCPRSRHCAFCSERLKQRTYQRSPEEIIAEVKELAQYGNHFYRLGCQTDLLLYQSTRL
NGKLMPNPDAIEELYRGIRKADPDLEVLHLDNINPYNLVQYEKESEQILKTITRYNTPGDIAAFGLESADPLVLEKNNIE
TDPETTYRAVAMMNEIGGYRENGLPKLLPGINFLHGLIGERKETFDYNYNFLKRLLDQGLMLRRINIRQVVTLGKYPRIK
IDRGKFLEYKERVNRNINHPMLKRVFPRGTIMKRVLTEKIRGKITYGRQLGSYPILIGIPGKLKLNRFVDVRVIDHGYRS
ITALPWPFKIKEATPEQLMTIPGIGKKTASNIFIEKPGNPDHLLKLLPDDFPYQEWKDWFTF
>Mature_542_residues
MKTSSIRTALIDGYLDEPSCLGVPPYISPEIRYTYGSLLDCGLREENIKYYTIDELRGDWEKSIEDLEHYDLVIIVAGTT
VPGHYLGGKPISFKEINELGSKLYYPQKVIGGPVTLVKKDFNGFDLVCDEITAINLYEALKDKEVNPSTLNKSIANWAVK
GASLTIKHPDYPHLICEIETFRGCPRSRHCAFCSERLKQRTYQRSPEEIIAEVKELAQYGNHFYRLGCQTDLLLYQSTRL
NGKLMPNPDAIEELYRGIRKADPDLEVLHLDNINPYNLVQYEKESEQILKTITRYNTPGDIAAFGLESADPLVLEKNNIE
TDPETTYRAVAMMNEIGGYRENGLPKLLPGINFLHGLIGERKETFDYNYNFLKRLLDQGLMLRRINIRQVVTLGKYPRIK
IDRGKFLEYKERVNRNINHPMLKRVFPRGTIMKRVLTEKIRGKITYGRQLGSYPILIGIPGKLKLNRFVDVRVIDHGYRS
ITALPWPFKIKEATPEQLMTIPGIGKKTASNIFIEKPGNPDHLLKLLPDDFPYQEWKDWFTF

Specific function: Unknown

COG id: COG1031

COG function: function code C; Uncharacterized Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 62314; Mature: 62314

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSSIRTALIDGYLDEPSCLGVPPYISPEIRYTYGSLLDCGLREENIKYYTIDELRGDW
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCCEEEEHHHHCCCH
EKSIEDLEHYDLVIIVAGTTVPGHYLGGKPISFKEINELGSKLYYPQKVIGGPVTLVKKD
HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEEEC
FNGFDLVCDEITAINLYEALKDKEVNPSTLNKSIANWAVKGASLTIKHPDYPHLICEIET
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCEEEEECCCCCEEEEEEHH
FRGCPRSRHCAFCSERLKQRTYQRSPEEIIAEVKELAQYGNHFYRLGCQTDLLLYQSTRL
HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEECCC
NGKLMPNPDAIEELYRGIRKADPDLEVLHLDNINPYNLVQYEKESEQILKTITRYNTPGD
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCC
IAAFGLESADPLVLEKNNIETDPETTYRAVAMMNEIGGYRENGLPKLLPGINFLHGLIGE
EEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
RKETFDYNYNFLKRLLDQGLMLRRINIRQVVTLGKYPRIKIDRGKFLEYKERVNRNINHP
CHHHCCCCHHHHHHHHHCCCEEEECCHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCH
MLKRVFPRGTIMKRVLTEKIRGKITYGRQLGSYPILIGIPGKLKLNRFVDVRVIDHGYRS
HHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCEEECEEEEEEEEECCCCE
ITALPWPFKIKEATPEQLMTIPGIGKKTASNIFIEKPGNPDHLLKLLPDDFPYQEWKDWF
EEECCCCEEECCCCHHHHEECCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHC
TF
CC
>Mature Secondary Structure
MKTSSIRTALIDGYLDEPSCLGVPPYISPEIRYTYGSLLDCGLREENIKYYTIDELRGDW
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCCEEEEHHHHCCCH
EKSIEDLEHYDLVIIVAGTTVPGHYLGGKPISFKEINELGSKLYYPQKVIGGPVTLVKKD
HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEEEC
FNGFDLVCDEITAINLYEALKDKEVNPSTLNKSIANWAVKGASLTIKHPDYPHLICEIET
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCEEEEECCCCCEEEEEEHH
FRGCPRSRHCAFCSERLKQRTYQRSPEEIIAEVKELAQYGNHFYRLGCQTDLLLYQSTRL
HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEECCC
NGKLMPNPDAIEELYRGIRKADPDLEVLHLDNINPYNLVQYEKESEQILKTITRYNTPGD
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCC
IAAFGLESADPLVLEKNNIETDPETTYRAVAMMNEIGGYRENGLPKLLPGINFLHGLIGE
EEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
RKETFDYNYNFLKRLLDQGLMLRRINIRQVVTLGKYPRIKIDRGKFLEYKERVNRNINHP
CHHHCCCCHHHHHHHHHCCCEEEECCHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCH
MLKRVFPRGTIMKRVLTEKIRGKITYGRQLGSYPILIGIPGKLKLNRFVDVRVIDHGYRS
HHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCEEECEEEEEEEEECCCCE
ITALPWPFKIKEATPEQLMTIPGIGKKTASNIFIEKPGNPDHLLKLLPDDFPYQEWKDWF
EEECCCCEEECCCCHHHHEECCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHC
TF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]