Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932437
Identifier: 220932437
GI number: 220932437
Start: 1717366
End: 1718121
Strand: Direct
Name: 220932437
Synonym: Hore_16010
Alternate gene names: NA
Gene position: 1717366-1718121 (Clockwise)
Preceding gene: 220932436
Following gene: 220932560
Centisome position: 66.61
GC content: 33.86
Gene sequence:
>756_bases ATGATTAAAAATACTAATATTTTTTTATCTGAAGGGAAACTTAGAGAAAGGAGGTTTAGAATGATGGATATATACCTTAA TATTTTAATAATTTTATTCGCACTTATAGCCTTTTTTATATATTATCTCCTCACTACAGAGAATAAGAACCGGAGGAAGC AAAGGATCATTAAAAGTCAAAATGAGTTAGAAGTTGCGGATGAACTTAACCCTAAAAGTTCTTTTACAGGAAACTCCTCT GATAGCAAGAATAAGATCAATACAAGCAATAACAATCGCTACAATTTACCCTCCAGCTATAATAAGACCTTTATTAGACT TTTTTCACGGGATCCGGACTGGCTTTACACTTACTGGGAGGTAAGTAATGATGAATATTACAATAATCAACCTCTGCTCA GGATTTATAATAAGCATAACGGTGATTATAAGGATATTGAAATAAGCCATGATACCCAGGACTGGTATATTTCCAACATT GAACCAGAAAACACCTATCAGGTCGTCATCGGATACCAGAATAATGGTACCTTCTTCCCTCTGGCTGAATCAAATACAGT TACTACTCCTCCCAATCAACCTTCATCAATTATTGATGAAGAATGGATGTTAATTGAAGAACTCGATAGTTATAGTTACC GGGTAAATGTTGGTTCAATATCTTTTGTCAAAGGTTTTGAGAAAAAGAAAATCGAAAAAGAACTGGAAGCAGATTCATAT ACCATCTATGAGGAAAACAGGAACAAACCCCATTAA
Upstream 100 bases:
>100_bases GTAACCTGGAAAAAAGTAACAATATTTTTCCCGAAATTGATTTCAAAATATATAACCAGAATATTAATAAAGGATGGGAT CTAAAGGAGGGTATTTCAGG
Downstream 100 bases:
>100_bases AAAAGTCCGGCAGTATTGCTGCCGGACTTAATTTTAACTGTTAAATTATTAATTTTTAATTATTAAATTATTTTAATAAA GGCTCCCGTTATGAACCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MIKNTNIFLSEGKLRERRFRMMDIYLNILIILFALIAFFIYYLLTTENKNRRKQRIIKSQNELEVADELNPKSSFTGNSS DSKNKINTSNNNRYNLPSSYNKTFIRLFSRDPDWLYTYWEVSNDEYYNNQPLLRIYNKHNGDYKDIEISHDTQDWYISNI EPENTYQVVIGYQNNGTFFPLAESNTVTTPPNQPSSIIDEEWMLIEELDSYSYRVNVGSISFVKGFEKKKIEKELEADSY TIYEENRNKPH
Sequences:
>Translated_251_residues MIKNTNIFLSEGKLRERRFRMMDIYLNILIILFALIAFFIYYLLTTENKNRRKQRIIKSQNELEVADELNPKSSFTGNSS DSKNKINTSNNNRYNLPSSYNKTFIRLFSRDPDWLYTYWEVSNDEYYNNQPLLRIYNKHNGDYKDIEISHDTQDWYISNI EPENTYQVVIGYQNNGTFFPLAESNTVTTPPNQPSSIIDEEWMLIEELDSYSYRVNVGSISFVKGFEKKKIEKELEADSY TIYEENRNKPH >Mature_251_residues MIKNTNIFLSEGKLRERRFRMMDIYLNILIILFALIAFFIYYLLTTENKNRRKQRIIKSQNELEVADELNPKSSFTGNSS DSKNKINTSNNNRYNLPSSYNKTFIRLFSRDPDWLYTYWEVSNDEYYNNQPLLRIYNKHNGDYKDIEISHDTQDWYISNI EPENTYQVVIGYQNNGTFFPLAESNTVTTPPNQPSSIIDEEWMLIEELDSYSYRVNVGSISFVKGFEKKKIEKELEADSY TIYEENRNKPH
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29871; Mature: 29871
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNTNIFLSEGKLRERRFRMMDIYLNILIILFALIAFFIYYLLTTENKNRRKQRIIKSQ CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC NELEVADELNPKSSFTGNSSDSKNKINTSNNNRYNLPSSYNKTFIRLFSRDPDWLYTYWE CCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEEE VSNDEYYNNQPLLRIYNKHNGDYKDIEISHDTQDWYISNIEPENTYQVVIGYQNNGTFFP ECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCEEEE LAESNTVTTPPNQPSSIIDEEWMLIEELDSYSYRVNVGSISFVKGFEKKKIEKELEADSY EECCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCHHHHHHHHHHCCCCE TIYEENRNKPH EEEECCCCCCC >Mature Secondary Structure MIKNTNIFLSEGKLRERRFRMMDIYLNILIILFALIAFFIYYLLTTENKNRRKQRIIKSQ CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC NELEVADELNPKSSFTGNSSDSKNKINTSNNNRYNLPSSYNKTFIRLFSRDPDWLYTYWE CCEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEEE VSNDEYYNNQPLLRIYNKHNGDYKDIEISHDTQDWYISNIEPENTYQVVIGYQNNGTFFP ECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCEEEE LAESNTVTTPPNQPSSIIDEEWMLIEELDSYSYRVNVGSISFVKGFEKKKIEKELEADSY EECCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCHHHHHHHHHHCCCCE TIYEENRNKPH EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA