Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932334
Identifier: 220932334
GI number: 220932334
Start: 1598096
End: 1598584
Strand: Direct
Name: 220932334
Synonym: Hore_14975
Alternate gene names: NA
Gene position: 1598096-1598584 (Clockwise)
Preceding gene: 220932333
Following gene: 220932335
Centisome position: 61.99
GC content: 39.26
Gene sequence:
>489_bases ATGGTTAACTACAGGTATGGGAAAAACCTCCCCTCCTTCAAAAAAACTACTGCTGAAATTATTAATATCCTGAAGGAAAA AGATATTAAAAAACTTGTCATTGATTTACGTCATAACGGAGGCGGCTCCTCTCCCCAGGGGTCACGGTTTGCCAGACAGT TAAAAAACCTTAACCTGGATACAGATATCTATGTAGTTATCGGTAACAGGACCTTTTCTGCGGCTACTATAAATGCTATT CACTTCAAAGAATACACTAAAGCAACCCTGATAGGAGAGCCAACCAGTGGTAAACCCAATCATTATGGTGAAGTCAAGAC CTTTAAATTACCCAACACAGGGATGCTAGTCCATTATTCAACCAAATATATTACCCTTATAGATAACGCTGACCCCGACT CCATCTACCCCGATATCTATTGTTATGTAAAATTTAGCGACTTTGTCAACGGAGTCGATACCATCCTGGAGAAAATAAAA AGGTTATAG
Upstream 100 bases:
>100_bases TAACAGACTTTTTTGGTATAAATACCTCCCGGACAGTAACATATTATACTTCCAGTATAATAAATGCTGAAGTAAAGAAT TAAACGAAAAATATGGGAAA
Downstream 100 bases:
>100_bases TTAAAATAAACTATTTGTCAATTTAATAATAAGGGGACTTTAATAATTGACCTTCAATTATTAATTACAGACTGAAGATT AAATCAAAAACAGAGGGAAA
Product: peptidase S41
Products: NA
Alternate protein names: Peptidase S; S41 Family Peptidase
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLDTDIYVVIGNRTFSAATINAI HFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYSTKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIK RL
Sequences:
>Translated_162_residues MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLDTDIYVVIGNRTFSAATINAI HFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYSTKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIK RL >Mature_162_residues MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLDTDIYVVIGNRTFSAATINAI HFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYSTKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIK RL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18338; Mature: 18338
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLD CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC TDIYVVIGNRTFSAATINAIHFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYS CEEEEEECCCEECCEEEEEEEHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEC TKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIKRL CEEEEEEECCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHCC >Mature Secondary Structure MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLD CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC TDIYVVIGNRTFSAATINAIHFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYS CEEEEEECCCEECCEEEEEEEHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEC TKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIKRL CEEEEEEECCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA