Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932127
Identifier: 220932127
GI number: 220932127
Start: 1384280
End: 1384501
Strand: Direct
Name: 220932127
Synonym: Hore_12900
Alternate gene names: NA
Gene position: 1384280-1384501 (Clockwise)
Preceding gene: 220932125
Following gene: 220932128
Centisome position: 53.69
GC content: 43.24
Gene sequence:
>222_bases TTGGCCAGACGTAATAACCATATTCTAAATCCACGGGCCGCTGATTCCCTTGACAGGTTTAAATATGAAACCGCTGATGA ATTAGGACTTATAAATAAAATTCAAAGACAGGGTTGGGAAAATATGACCACCAGAGAAGTTGGTAAAATCGGTGGTAATA TGGTCCGTAAGATGATTCAGATGGCCGAGGACAAAATGGCAAGGCGGGGACCTGGCAAGTAG
Upstream 100 bases:
>100_bases TATAAAATCATTGTTTTTTAATTTACCATAAATATAGTAACATAAAATTTAATCCTGCTGCAAATTATAATTAATGAACT ACTTGTCAGGAGGTGTCAAA
Downstream 100 bases:
>100_bases ATAATATAGATCAGGCGGGATTTTTTAAATCCCGCCTCTCTAATAACTCCCATATAATTCTAGTATAACCTCCCTCCCTA AATCGCATAATAGTAATACA
Product: small acid-soluble spore protein alpha/beta type
Products: NA
Alternate protein names: Acid Soluble Spore Domain Protein; Small Acid-Soluble Spore Proteins Alpha/Be
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MARRNNHILNPRAADSLDRFKYETADELGLINKIQRQGWENMTTREVGKIGGNMVRKMIQMAEDKMARRGPGK
Sequences:
>Translated_73_residues MARRNNHILNPRAADSLDRFKYETADELGLINKIQRQGWENMTTREVGKIGGNMVRKMIQMAEDKMARRGPGK >Mature_72_residues ARRNNHILNPRAADSLDRFKYETADELGLINKIQRQGWENMTTREVGKIGGNMVRKMIQMAEDKMARRGPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8416; Mature: 8285
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRNNHILNPRAADSLDRFKYETADELGLINKIQRQGWENMTTREVGKIGGNMVRKMIQ CCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MAEDKMARRGPGK HHHHHHHHCCCCC >Mature Secondary Structure ARRNNHILNPRAADSLDRFKYETADELGLINKIQRQGWENMTTREVGKIGGNMVRKMIQ CCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MAEDKMARRGPGK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA