Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932128
Identifier: 220932128
GI number: 220932128
Start: 1384622
End: 1384858
Strand: Direct
Name: 220932128
Synonym: Hore_12910
Alternate gene names: NA
Gene position: 1384622-1384858 (Clockwise)
Preceding gene: 220932127
Following gene: 220932153
Centisome position: 53.71
GC content: 42.62
Gene sequence:
>237_bases ATGGCAGGAACTGGACAAAGAAATAATACTCTGATTAACCCTCTGGCTGCTCAGGCCATGGAAAAATTTAAGTATGAAGT AGCTCAGGAACTGGGTATTCAGATTCCACAGAGCGGTTATTATGGTGAAATGACTACCCGTGACACCGGTGCTCTCGGTG GTCATATGGTAAGGAAAATGGTTGAAGCTTATGAAAATTCTTTAGCCGGTACAGGTAACCAGAACCAACAGTATTAA
Upstream 100 bases:
>100_bases TTTTTTAAATCCCGCCTCTCTAATAACTCCCATATAATTCTAGTATAACCTCCCTCCCTAAATCGCATAATAGTAATACA CTGAAAGGAGGTGAGAATTG
Downstream 100 bases:
>100_bases TTTTAATATAATTTCTTACGTTTCTGGTTTAATTATCCTGGAATTATAAAAATCATCTCCTTTTAATACTGTAAAGTAAG TCGACCCTAAAATGAGCGGG
Product: small acid-soluble spore protein alpha/beta type
Products: NA
Alternate protein names: Small Acid-Soluble Spore; Small Acid-Soluble Spore Proteins Alpha/Be; Small Acid-Soluble Spore Protein AlphaP
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MAGTGQRNNTLINPLAAQAMEKFKYEVAQELGIQIPQSGYYGEMTTRDTGALGGHMVRKMVEAYENSLAGTGNQNQQY
Sequences:
>Translated_78_residues MAGTGQRNNTLINPLAAQAMEKFKYEVAQELGIQIPQSGYYGEMTTRDTGALGGHMVRKMVEAYENSLAGTGNQNQQY >Mature_77_residues AGTGQRNNTLINPLAAQAMEKFKYEVAQELGIQIPQSGYYGEMTTRDTGALGGHMVRKMVEAYENSLAGTGNQNQQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8544; Mature: 8413
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00304 SASP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTGQRNNTLINPLAAQAMEKFKYEVAQELGIQIPQSGYYGEMTTRDTGALGGHMVRKM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VEAYENSLAGTGNQNQQY HHHHHHHCCCCCCCCCCC >Mature Secondary Structure AGTGQRNNTLINPLAAQAMEKFKYEVAQELGIQIPQSGYYGEMTTRDTGALGGHMVRKM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VEAYENSLAGTGNQNQQY HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA