Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is thrS [H]
Identifier: 220931918
GI number: 220931918
Start: 1169538
End: 1171187
Strand: Direct
Name: thrS [H]
Synonym: Hore_10770
Alternate gene names: 220931918
Gene position: 1169538-1171187 (Clockwise)
Preceding gene: 220931917
Following gene: 220931920
Centisome position: 45.36
GC content: 33.03
Gene sequence:
>1650_bases ATGATTGAAGTCTATATTAATGAAAAAAAATACAGTTTTGATAAGGGTATAACCGTTGAGGAGGTTGTAAAGGAAACATA CAATGGAAATTATAGAGAAGTAGTGGGGGCAATTGTAAATAATGAAGTAGAATCGTTAAATTACAAATTAAATAACCGGA GTCAGGTTTCTTTTCTTACAATTAATGACGAAAGTGGTAACAGAATTTACCGGAGAAGTTTGTTTTTTCTATTGACCAGG GTTATATATTATTTGTATCCCGGAGCCAAGTTATCCATAGAGCATTCTCTGGGAAATGGAATTTATTGTGAATTAAATAA AAATACACCCATAACCCAGTCAGATCTTATTAAAATAAAAAAGAGAATGGAAGAACTGGTGAGAAAAGACCTGCCTATCA ATAAAATAAAGGTAAACAAAGATAAACTGGAGAAAATTTATACAGAGCAGGATTTTTATGATAAAGTTAAGCTAGTTAAA CAATTAGATATCTCTCAGTGGCCTGTATATGAGCTCGATGGATTTTATAACTATTTTTATAGTATTCTGGTTCCCAGTAC CGGTTATCTGGATAAATTCGATATCCACTTTAAAATGCCGGGATTTATTCTATTATATCCTTTTCCCGGTTCTAATAAAG AGGTTTCAAGGTATGTAGAGCAACCAAAACTTGCCAGTATATTTTATGAATATGAAAAATGGGGAGAGATTATAAATGTA AGTAATGTCAGTGAATTAAACGAAGTAATTACTAATAATGATTATGGGGATATTATCAGAATTACAGAAGCATTACATGA AAAAAAGATCGCTTTAATTGCAGATGAAATTACAGAAAAAATAGATAATAAAAGGGTTATTTTGATTGCTGGCCCATCTT CATCCGGGAAAACTACTTTTGCCCAGAGATTATCAATTCAACTCAGGGTAAATGGATTAAGGCCAGTTGCCATTTCCACC GATGATTATTTTGTTGACCGTGATAAAACGCCACGGGATGAAGAAGGGAACCTTGATTTTGAAGCTATAGAAGCTATTGA TTTGAAATTATTTAATGAACATCTGGTAAAACTTCTCCAGGGTGAAGAGGTAGAAATACCGATCTATAATTTTAAAAAGG GAAAGAGGGAACCTGTAGGCAGGCATCTAAAGATTGAGAAAGACCAGCCAATAATTATTGAAGGAATTCACGGTCTTAAT GAAAGGTTAACAGCTGTAATTCCTAAGGAATTAAAATATAAAATATATGTAAGTGCCCTGACCCAGTTAAATATAGACCG TCATAACCGGATTCCAACTACCGATAATAGATTAATAAGGAGAATTGTTAGAGATTATTATTTCAGGGGCCATGACGCTG CTAAAACAATTGAATTATGGCCCGCTGTCAGGAGAGGGGAAGAAAAAAACATCTTCCCATACCAGGAAAATGCCGATATT ATGTTTAATTCTGCCCTGACCTATGAACTTTCTGTATTGAAAAAATATGCCTTTCCTATTTTAAAAGAAATAAAATCAGG TCAGGATGGTTATTTTGAAGCAAAAAGATTACTGGAAATATTATCGTGTTTTAATAGTTTACCTGATGAAAAAGATATTC CCAGAACATCTATTTTAAGGGAGTTTATAGGGGGGAGTTGTTTTAAATAA
Upstream 100 bases:
>100_bases GAAATCAGAAAAAGATAAGGTTGTAGAAAATTATTTTAAAAAGGTTATAAAAAGATTAAATCAATAAATATTTTATGGTT ATTAGGCCAGGAGGTATATT
Downstream 100 bases:
>100_bases TTCAAATATCTAACCGGCCCTCTCTTTATCTTTCTCTATATTAAAGGTTCTGATGATAATTTCATAGGCCCTTTCCCAGT TGTTAACACGATATAATTTT
Product: uridine kinase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MIEVYINEKKYSFDKGITVEEVVKETYNGNYREVVGAIVNNEVESLNYKLNNRSQVSFLTINDESGNRIYRRSLFFLLTR VIYYLYPGAKLSIEHSLGNGIYCELNKNTPITQSDLIKIKKRMEELVRKDLPINKIKVNKDKLEKIYTEQDFYDKVKLVK QLDISQWPVYELDGFYNYFYSILVPSTGYLDKFDIHFKMPGFILLYPFPGSNKEVSRYVEQPKLASIFYEYEKWGEIINV SNVSELNEVITNNDYGDIIRITEALHEKKIALIADEITEKIDNKRVILIAGPSSSGKTTFAQRLSIQLRVNGLRPVAIST DDYFVDRDKTPRDEEGNLDFEAIEAIDLKLFNEHLVKLLQGEEVEIPIYNFKKGKREPVGRHLKIEKDQPIIIEGIHGLN ERLTAVIPKELKYKIYVSALTQLNIDRHNRIPTTDNRLIRRIVRDYYFRGHDAAKTIELWPAVRRGEEKNIFPYQENADI MFNSALTYELSVLKKYAFPILKEIKSGQDGYFEAKRLLEILSCFNSLPDEKDIPRTSILREFIGGSCFK
Sequences:
>Translated_549_residues MIEVYINEKKYSFDKGITVEEVVKETYNGNYREVVGAIVNNEVESLNYKLNNRSQVSFLTINDESGNRIYRRSLFFLLTR VIYYLYPGAKLSIEHSLGNGIYCELNKNTPITQSDLIKIKKRMEELVRKDLPINKIKVNKDKLEKIYTEQDFYDKVKLVK QLDISQWPVYELDGFYNYFYSILVPSTGYLDKFDIHFKMPGFILLYPFPGSNKEVSRYVEQPKLASIFYEYEKWGEIINV SNVSELNEVITNNDYGDIIRITEALHEKKIALIADEITEKIDNKRVILIAGPSSSGKTTFAQRLSIQLRVNGLRPVAIST DDYFVDRDKTPRDEEGNLDFEAIEAIDLKLFNEHLVKLLQGEEVEIPIYNFKKGKREPVGRHLKIEKDQPIIIEGIHGLN ERLTAVIPKELKYKIYVSALTQLNIDRHNRIPTTDNRLIRRIVRDYYFRGHDAAKTIELWPAVRRGEEKNIFPYQENADI MFNSALTYELSVLKKYAFPILKEIKSGQDGYFEAKRLLEILSCFNSLPDEKDIPRTSILREFIGGSCFK >Mature_549_residues MIEVYINEKKYSFDKGITVEEVVKETYNGNYREVVGAIVNNEVESLNYKLNNRSQVSFLTINDESGNRIYRRSLFFLLTR VIYYLYPGAKLSIEHSLGNGIYCELNKNTPITQSDLIKIKKRMEELVRKDLPINKIKVNKDKLEKIYTEQDFYDKVKLVK QLDISQWPVYELDGFYNYFYSILVPSTGYLDKFDIHFKMPGFILLYPFPGSNKEVSRYVEQPKLASIFYEYEKWGEIINV SNVSELNEVITNNDYGDIIRITEALHEKKIALIADEITEKIDNKRVILIAGPSSSGKTTFAQRLSIQLRVNGLRPVAIST DDYFVDRDKTPRDEEGNLDFEAIEAIDLKLFNEHLVKLLQGEEVEIPIYNFKKGKREPVGRHLKIEKDQPIIIEGIHGLN ERLTAVIPKELKYKIYVSALTQLNIDRHNRIPTTDNRLIRRIVRDYYFRGHDAAKTIELWPAVRRGEEKNIFPYQENADI MFNSALTYELSVLKKYAFPILKEIKSGQDGYFEAKRLLEILSCFNSLPDEKDIPRTSILREFIGGSCFK
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0572
COG function: function code F; Uridine kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1788013, Length=149, Percent_Identity=26.8456375838926, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 63926; Mature: 63926
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVYINEKKYSFDKGITVEEVVKETYNGNYREVVGAIVNNEVESLNYKLNNRSQVSFLT CEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHCEEEECCCCEEEEEE INDESGNRIYRRSLFFLLTRVIYYLYPGAKLSIEHSLGNGIYCELNKNTPITQSDLIKIK EECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHH KRMEELVRKDLPINKIKVNKDKLEKIYTEQDFYDKVKLVKQLDISQWPVYELDGFYNYFY HHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH SILVPSTGYLDKFDIHFKMPGFILLYPFPGSNKEVSRYVEQPKLASIFYEYEKWGEIINV HHHCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCEECC SNVSELNEVITNNDYGDIIRITEALHEKKIALIADEITEKIDNKRVILIAGPSSSGKTTF CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHE AQRLSIQLRVNGLRPVAISTDDYFVDRDKTPRDEEGNLDFEAIEAIDLKLFNEHLVKLLQ EEEEEEEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GEEVEIPIYNFKKGKREPVGRHLKIEKDQPIIIEGIHGLNERLTAVIPKELKYKIYVSAL CCCEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHCCHHHEEEEEEEEH TQLNIDRHNRIPTTDNRLIRRIVRDYYFRGHDAAKTIELWPAVRRGEEKNIFPYQENADI HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCE MFNSALTYELSVLKKYAFPILKEIKSGQDGYFEAKRLLEILSCFNSLPDEKDIPRTSILR EEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH EFIGGSCFK HHHCCCCCC >Mature Secondary Structure MIEVYINEKKYSFDKGITVEEVVKETYNGNYREVVGAIVNNEVESLNYKLNNRSQVSFLT CEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHCEEEECCCCEEEEEE INDESGNRIYRRSLFFLLTRVIYYLYPGAKLSIEHSLGNGIYCELNKNTPITQSDLIKIK EECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHH KRMEELVRKDLPINKIKVNKDKLEKIYTEQDFYDKVKLVKQLDISQWPVYELDGFYNYFY HHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH SILVPSTGYLDKFDIHFKMPGFILLYPFPGSNKEVSRYVEQPKLASIFYEYEKWGEIINV HHHCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCEECC SNVSELNEVITNNDYGDIIRITEALHEKKIALIADEITEKIDNKRVILIAGPSSSGKTTF CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHE AQRLSIQLRVNGLRPVAISTDDYFVDRDKTPRDEEGNLDFEAIEAIDLKLFNEHLVKLLQ EEEEEEEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GEEVEIPIYNFKKGKREPVGRHLKIEKDQPIIIEGIHGLNERLTAVIPKELKYKIYVSAL CCCEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHCCHHHEEEEEEEEH TQLNIDRHNRIPTTDNRLIRRIVRDYYFRGHDAAKTIELWPAVRRGEEKNIFPYQENADI HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCE MFNSALTYELSVLKKYAFPILKEIKSGQDGYFEAKRLLEILSCFNSLPDEKDIPRTSILR EEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH EFIGGSCFK HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA