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The map label for this gene is ymfF [H]

Identifier: 220931914

GI number: 220931914

Start: 1162472

End: 1163755

Strand: Direct

Name: ymfF [H]

Synonym: Hore_10720

Alternate gene names: 220931914

Gene position: 1162472-1163755 (Clockwise)

Preceding gene: 220931913

Following gene: 220931915

Centisome position: 45.09

GC content: 32.94

Gene sequence:

>1284_bases
ATGAATAGATTAACAGTTTTTTCAGATTATAAAACAGTCAGTGATATAGATTTGCATATTTGCCAAAATCAAAAGTTTAA
AACCAATTTATTACAGATATATATAACCCAACCCTTAATTAAGGAGACTGCCAGTGGTACTGCCCTGATACCATATATTC
TGTACCGGGGTAGTACTACATACCCGACAAATAGAGAAATAGTACTTAAACTTGATAGTTTATATGGAGCCAGCCTAAAT
GTTTCGGTTTTAAAAAGGGGAGAAAACCAGCTTGTTTCTTTCTCCCTTGAGGTTCCGAATGAAAAATATCTTCCTGATAG
GGAACCTCTCTTTGAAAAAGCCCTGGATTTCCTGTATGACATTGTTTTTAATCCCCTGGTGGTAGAGGAGGGTTTTAAAG
GGGATTATGTTGATCAGGAAAAAAAATTTTTAGAAGAAGAAATAAAATCATTAATAAATGATAAATTCAATTATTCCCAG
GAAAGATGTTATCAGGAAATGTGTCGTCATGAGCCCTTTGGCATTTATAAACTTGGAGACATTGAAACACTACCCCAACT
GGATAGATACAAAGTTTATAACCTTTATTCAAAACTAATTAAAAATAATCCAATTAATATGTTTGTGGTGGGGGATATTG
ACGAAGAAAAAACTTACTACAAAATAAACGAAAAATTTTCTATCAAACGGTATAAAAAAATTGATGATAATAGTACAGAA
GTTGTGAAGGAGATAAATGCTCCCAGGGAAGTAACTGAAGAGTTAAATGTTAATCAGGGAAAACTGGTAATTGGTTTTAG
AACAGGTATTACCAGGGGTGATAAATTATATAATGCCCTTCTCTTTTATAATGGTATTTTAGGACGCTTTCCTCATTCAA
AATTATTCCAAAATGTAAGAGAGAAGGCCAGTCTGGCCTATTATGCCTTCTCACGCCTTGAATCTACAAAAGGATTATTG
ACCATAAATGCAGGGATAGATTTTAAAAATTATGATAAAGCCAGGGAGATTATTTTAAAACAGATGGATGAAATATCAAA
CGGGAATATTTCCAGTGATGAGTTTGAATGGACCAAAAAGGGTATAATTAATAATCTCAAGACTATGGCTGATAGCAATA
AAGGTCTGGTCAGGCACTATCTGCTGGGTTTGATAAATAATAAAGCTGAGTCCATTTCAGATATGATTTACGGTTTAAGA
AAAGTGACAGTAGATGATATTGTAGAAGTATCGAAAAATATAAAAATTGATACGATCTATTTTTTAAAGAAAAAGGGGGC
CTAA

Upstream 100 bases:

>100_bases
CTGGAAGAACTACAGGAGGTCCTTCAACAGTTAAGGGATAAAACACAAATAGAATAATTAAAAACATTAAATATAACAAT
AGATACAGGGGAAGGTGACT

Downstream 100 bases:

>100_bases
TAGTGAAAGAATTCTATAATGAAATTATCAGAGAATATTTATATACAGATTCAATAGATAATGGTCTTAATGTCTATATA
ATGCCCCGGAAAAATTATAA

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNRLTVFSDYKTVSDIDLHICQNQKFKTNLLQIYITQPLIKETASGTALIPYILYRGSTTYPTNREIVLKLDSLYGASLN
VSVLKRGENQLVSFSLEVPNEKYLPDREPLFEKALDFLYDIVFNPLVVEEGFKGDYVDQEKKFLEEEIKSLINDKFNYSQ
ERCYQEMCRHEPFGIYKLGDIETLPQLDRYKVYNLYSKLIKNNPINMFVVGDIDEEKTYYKINEKFSIKRYKKIDDNSTE
VVKEINAPREVTEELNVNQGKLVIGFRTGITRGDKLYNALLFYNGILGRFPHSKLFQNVREKASLAYYAFSRLESTKGLL
TINAGIDFKNYDKAREIILKQMDEISNGNISSDEFEWTKKGIINNLKTMADSNKGLVRHYLLGLINNKAESISDMIYGLR
KVTVDDIVEVSKNIKIDTIYFLKKKGA

Sequences:

>Translated_427_residues
MNRLTVFSDYKTVSDIDLHICQNQKFKTNLLQIYITQPLIKETASGTALIPYILYRGSTTYPTNREIVLKLDSLYGASLN
VSVLKRGENQLVSFSLEVPNEKYLPDREPLFEKALDFLYDIVFNPLVVEEGFKGDYVDQEKKFLEEEIKSLINDKFNYSQ
ERCYQEMCRHEPFGIYKLGDIETLPQLDRYKVYNLYSKLIKNNPINMFVVGDIDEEKTYYKINEKFSIKRYKKIDDNSTE
VVKEINAPREVTEELNVNQGKLVIGFRTGITRGDKLYNALLFYNGILGRFPHSKLFQNVREKASLAYYAFSRLESTKGLL
TINAGIDFKNYDKAREIILKQMDEISNGNISSDEFEWTKKGIINNLKTMADSNKGLVRHYLLGLINNKAESISDMIYGLR
KVTVDDIVEVSKNIKIDTIYFLKKKGA
>Mature_427_residues
MNRLTVFSDYKTVSDIDLHICQNQKFKTNLLQIYITQPLIKETASGTALIPYILYRGSTTYPTNREIVLKLDSLYGASLN
VSVLKRGENQLVSFSLEVPNEKYLPDREPLFEKALDFLYDIVFNPLVVEEGFKGDYVDQEKKFLEEEIKSLINDKFNYSQ
ERCYQEMCRHEPFGIYKLGDIETLPQLDRYKVYNLYSKLIKNNPINMFVVGDIDEEKTYYKINEKFSIKRYKKIDDNSTE
VVKEINAPREVTEELNVNQGKLVIGFRTGITRGDKLYNALLFYNGILGRFPHSKLFQNVREKASLAYYAFSRLESTKGLL
TINAGIDFKNYDKAREIILKQMDEISNGNISSDEFEWTKKGIINNLKTMADSNKGLVRHYLLGLINNKAESISDMIYGLR
KVTVDDIVEVSKNIKIDTIYFLKKKGA

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 49444; Mature: 49444

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLTVFSDYKTVSDIDLHICQNQKFKTNLLQIYITQPLIKETASGTALIPYILYRGSTT
CCCEEEEECCCCCCCCEEEEECCCCHHCCEEEEEECCHHHHHCCCCCEEEHHHEECCCCC
YPTNREIVLKLDSLYGASLNVSVLKRGENQLVSFSLEVPNEKYLPDREPLFEKALDFLYD
CCCCCEEEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
IVFNPLVVEEGFKGDYVDQEKKFLEEEIKSLINDKFNYSQERCYQEMCRHEPFGIYKLGD
HHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECC
IETLPQLDRYKVYNLYSKLIKNNPINMFVVGDIDEEKTYYKINEKFSIKRYKKIDDNSTE
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCHHH
VVKEINAPREVTEELNVNQGKLVIGFRTGITRGDKLYNALLFYNGILGRFPHSKLFQNVR
HHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
EKASLAYYAFSRLESTKGLLTINAGIDFKNYDKAREIILKQMDEISNGNISSDEFEWTKK
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GIINNLKTMADSNKGLVRHYLLGLINNKAESISDMIYGLRKVTVDDIVEVSKNIKIDTIY
HHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
FLKKKGA
EEEECCC
>Mature Secondary Structure
MNRLTVFSDYKTVSDIDLHICQNQKFKTNLLQIYITQPLIKETASGTALIPYILYRGSTT
CCCEEEEECCCCCCCCEEEEECCCCHHCCEEEEEECCHHHHHCCCCCEEEHHHEECCCCC
YPTNREIVLKLDSLYGASLNVSVLKRGENQLVSFSLEVPNEKYLPDREPLFEKALDFLYD
CCCCCEEEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
IVFNPLVVEEGFKGDYVDQEKKFLEEEIKSLINDKFNYSQERCYQEMCRHEPFGIYKLGD
HHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECC
IETLPQLDRYKVYNLYSKLIKNNPINMFVVGDIDEEKTYYKINEKFSIKRYKKIDDNSTE
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCHHH
VVKEINAPREVTEELNVNQGKLVIGFRTGITRGDKLYNALLFYNGILGRFPHSKLFQNVR
HHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
EKASLAYYAFSRLESTKGLLTINAGIDFKNYDKAREIILKQMDEISNGNISSDEFEWTKK
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
GIINNLKTMADSNKGLVRHYLLGLINNKAESISDMIYGLRKVTVDDIVEVSKNIKIDTIY
HHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
FLKKKGA
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]