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The map label for this gene is ymfH [H]

Identifier: 220931915

GI number: 220931915

Start: 1163758

End: 1165032

Strand: Direct

Name: ymfH [H]

Synonym: Hore_10730

Alternate gene names: 220931915

Gene position: 1163758-1165032 (Clockwise)

Preceding gene: 220931914

Following gene: 220931916

Centisome position: 45.14

GC content: 32.08

Gene sequence:

>1275_bases
GTGAAAGAATTCTATAATGAAATTATCAGAGAATATTTATATACAGATTCAATAGATAATGGTCTTAATGTCTATATAAT
GCCCCGGAAAAATTATAATCGTCAGTATGCTATTTTTGCCACCAGGTATGGCTCCATTGATATTAAATTTGTTGATCCTG
AAACCGGTCAAAAGACAACGGTTCCAGAAGGCATTGCTCATTTCTTGGAACATAAACTTTTTGAAGGTAAAGATGAGAGT
TCTTTCAATAAATTTGCCCGTCTTGGTGCATCAGCCAATGCATATACGAATTTCACCAGAACAGCATATCTGTTTTCCAG
TACCGGTAATTTTGACAGGGCTTTAATTAATTTAATCGAATTTGTACAGTCACCATATTTTACTGATGAAAATGTAAATA
AAGAGAAGGGAATAATAAGCCAGGAAATAAGAATGTATGAAGACGACCCTTACTGGCAGGTCTTTTTTAACCTTCTTCAG
GGGTTATACCATAATCATCCAGTTAAATACGATATTGCTGGCTCTATCGAGAGTATAAGTAGAATTACAAAAAAAGATTT
ATATACCTGTTACCGCACTTTTTACCACCCTTCAAATATGGTACTGTTTATTACCGGTAATGTTGATGTTAAAGAAACAC
TTGATTTAATCAGGAGAAATCAGAAGGGTAAAAAATTTTCCGATCTCAACCCGATAAAGAGGTTTTATCCTGAAGAGCCC
CGTGAGGTTAAAAAAACCAGTATTATAAAAACCATGGATGTTTCTAAAACATTATTTACCCTTGGTTTTAAAGAAAAAAA
TGTTGATGAAGAACATATGGTTAAACTGGAGATAGGGTCCAATATTCTTTTGGAAATGATGGTAGGGAAAGGGACAGAAT
TATACCAAAAATTATATGAAGAAGGTCTTGTAGATGATGATTATTCATTCAGTTACACAAGACAACCGGGTTATGGTTAT
GCTATGATATCCAGTGAAACGAGGAATTCAGAAGAACTTTATAATAGACTCGTAAATGGTATTGAAAAAGCAGATAAAAT
ATTGACTGAAGATAATTTTACCAGGGTTTATAATAAATACATGGGAGATTTTGTTGAGATATTTAATTCTTTTAGTGTTA
CTGGTAATCAGTTTGTTGATTTTTATTTTAAGGGTGTTAACGTCTTTGATATTTTCAACATTATAAACGATATAGATCTT
AATTATATTAAATCACGTTATATTGAATTGTTTACAGATAATTTGCCGGTCCAGTCAGTTATTAAGTCTAAATAG

Upstream 100 bases:

>100_bases
TTTACGGTTTAAGAAAAGTGACAGTAGATGATATTGTAGAAGTATCGAAAAATATAAAAATTGATACGATCTATTTTTTA
AAGAAAAAGGGGGCCTAATA

Downstream 100 bases:

>100_bases
TTCTATTAAAAGTTTTTTAGATAATCTCAGGCCAGACAAAGCAATCAATTTATAATGAGTATCCGGTTTTCAGACTCCCA
GTAGAATTAATTATTATGTG

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKEFYNEIIREYLYTDSIDNGLNVYIMPRKNYNRQYAIFATRYGSIDIKFVDPETGQKTTVPEGIAHFLEHKLFEGKDES
SFNKFARLGASANAYTNFTRTAYLFSSTGNFDRALINLIEFVQSPYFTDENVNKEKGIISQEIRMYEDDPYWQVFFNLLQ
GLYHNHPVKYDIAGSIESISRITKKDLYTCYRTFYHPSNMVLFITGNVDVKETLDLIRRNQKGKKFSDLNPIKRFYPEEP
REVKKTSIIKTMDVSKTLFTLGFKEKNVDEEHMVKLEIGSNILLEMMVGKGTELYQKLYEEGLVDDDYSFSYTRQPGYGY
AMISSETRNSEELYNRLVNGIEKADKILTEDNFTRVYNKYMGDFVEIFNSFSVTGNQFVDFYFKGVNVFDIFNIINDIDL
NYIKSRYIELFTDNLPVQSVIKSK

Sequences:

>Translated_424_residues
MKEFYNEIIREYLYTDSIDNGLNVYIMPRKNYNRQYAIFATRYGSIDIKFVDPETGQKTTVPEGIAHFLEHKLFEGKDES
SFNKFARLGASANAYTNFTRTAYLFSSTGNFDRALINLIEFVQSPYFTDENVNKEKGIISQEIRMYEDDPYWQVFFNLLQ
GLYHNHPVKYDIAGSIESISRITKKDLYTCYRTFYHPSNMVLFITGNVDVKETLDLIRRNQKGKKFSDLNPIKRFYPEEP
REVKKTSIIKTMDVSKTLFTLGFKEKNVDEEHMVKLEIGSNILLEMMVGKGTELYQKLYEEGLVDDDYSFSYTRQPGYGY
AMISSETRNSEELYNRLVNGIEKADKILTEDNFTRVYNKYMGDFVEIFNSFSVTGNQFVDFYFKGVNVFDIFNIINDIDL
NYIKSRYIELFTDNLPVQSVIKSK
>Mature_424_residues
MKEFYNEIIREYLYTDSIDNGLNVYIMPRKNYNRQYAIFATRYGSIDIKFVDPETGQKTTVPEGIAHFLEHKLFEGKDES
SFNKFARLGASANAYTNFTRTAYLFSSTGNFDRALINLIEFVQSPYFTDENVNKEKGIISQEIRMYEDDPYWQVFFNLLQ
GLYHNHPVKYDIAGSIESISRITKKDLYTCYRTFYHPSNMVLFITGNVDVKETLDLIRRNQKGKKFSDLNPIKRFYPEEP
REVKKTSIIKTMDVSKTLFTLGFKEKNVDEEHMVKLEIGSNILLEMMVGKGTELYQKLYEEGLVDDDYSFSYTRQPGYGY
AMISSETRNSEELYNRLVNGIEKADKILTEDNFTRVYNKYMGDFVEIFNSFSVTGNQFVDFYFKGVNVFDIFNIINDIDL
NYIKSRYIELFTDNLPVQSVIKSK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=160, Percent_Identity=31.875, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1787770, Length=223, Percent_Identity=26.457399103139, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 49671; Mature: 49671

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFYNEIIREYLYTDSIDNGLNVYIMPRKNYNRQYAIFATRYGSIDIKFVDPETGQKTT
CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEEEEECCCCCCCCC
VPEGIAHFLEHKLFEGKDESSFNKFARLGASANAYTNFTRTAYLFSSTGNFDRALINLIE
CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCCEEEEEEECCCCHHHHHHHHHH
FVQSPYFTDENVNKEKGIISQEIRMYEDDPYWQVFFNLLQGLYHNHPVKYDIAGSIESIS
HHHCCCCCCCCCCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
RITKKDLYTCYRTFYHPSNMVLFITGNVDVKETLDLIRRNQKGKKFSDLNPIKRFYPEEP
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
REVKKTSIIKTMDVSKTLFTLGFKEKNVDEEHMVKLEIGSNILLEMMVGKGTELYQKLYE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCEEHHHHHCCCHHHHHHHHH
EGLVDDDYSFSYTRQPGYGYAMISSETRNSEELYNRLVNGIEKADKILTEDNFTRVYNKY
CCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MGDFVEIFNSFSVTGNQFVDFYFKGVNVFDIFNIINDIDLNYIKSRYIELFTDNLPVQSV
HHHHHHHHHCCCCCCCCEEEHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH
IKSK
HCCC
>Mature Secondary Structure
MKEFYNEIIREYLYTDSIDNGLNVYIMPRKNYNRQYAIFATRYGSIDIKFVDPETGQKTT
CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEEEEECCCCCCCCC
VPEGIAHFLEHKLFEGKDESSFNKFARLGASANAYTNFTRTAYLFSSTGNFDRALINLIE
CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCCEEEEEEECCCCHHHHHHHHHH
FVQSPYFTDENVNKEKGIISQEIRMYEDDPYWQVFFNLLQGLYHNHPVKYDIAGSIESIS
HHHCCCCCCCCCCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
RITKKDLYTCYRTFYHPSNMVLFITGNVDVKETLDLIRRNQKGKKFSDLNPIKRFYPEEP
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
REVKKTSIIKTMDVSKTLFTLGFKEKNVDEEHMVKLEIGSNILLEMMVGKGTELYQKLYE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCEEHHHHHCCCHHHHHHHHH
EGLVDDDYSFSYTRQPGYGYAMISSETRNSEELYNRLVNGIEKADKILTEDNFTRVYNKY
CCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
MGDFVEIFNSFSVTGNQFVDFYFKGVNVFDIFNIINDIDLNYIKSRYIELFTDNLPVQSV
HHHHHHHHHCCCCCCCCEEEHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH
IKSK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]