Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is cheY [H]
Identifier: 220931904
GI number: 220931904
Start: 1151753
End: 1152121
Strand: Direct
Name: cheY [H]
Synonym: Hore_10620
Alternate gene names: 220931904
Gene position: 1151753-1152121 (Clockwise)
Preceding gene: 220931903
Following gene: 220931905
Centisome position: 44.67
GC content: 35.23
Gene sequence:
>369_bases ATGTCTAAAAAAATATTAATAGTTGACGATGCTGCATTTATGAGACTAACCTTAAAGAATTTGCTTGAGAATGAGGGGTA TGATGTAATTGGAGAGGCTTCTAATGGGCAGGAGGCTGTAGAACTTTATCAGGAATTAGAGCCTGATCTGGTTACTCTGG ATATTACTATGCCGGAAATGGATGGTATTTCGGCCTTAAAAGAAATTAAAGGAATTGATCCGGACGCAAAAATTATTATG TGCAGTGCCATGGGGCAACAATCAATGGTTATTGAAGCAATTGAAGCAGGAGCTAAAGATTTTATAGTCAAGCCCTTTAA AGAGGATAGAGTTAAGAAAGCTGTTAAAAAAATATTTAATAAAGATTAA
Upstream 100 bases:
>100_bases ATAATCAAAAAAGCCAGTATAGGTCGGTTTTTGTCTTATTTTTTGATATAATAATATTAAAATAGAGTAGAAATTATAAC AGGAAATAGGAGGTTATATT
Downstream 100 bases:
>100_bases GACAGATGTAATATATTCAATGAGGTAATGAGTATAAGAATTTTTGAGAATTATTATTTTTACAAAATGAGGGGTTGTAC ATATGTCTATTGAAAGGGAT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSKKILIVDDAAFMRLTLKNLLENEGYDVIGEASNGQEAVELYQELEPDLVTLDITMPEMDGISALKEIKGIDPDAKIIM CSAMGQQSMVIEAIEAGAKDFIVKPFKEDRVKKAVKKIFNKD
Sequences:
>Translated_122_residues MSKKILIVDDAAFMRLTLKNLLENEGYDVIGEASNGQEAVELYQELEPDLVTLDITMPEMDGISALKEIKGIDPDAKIIM CSAMGQQSMVIEAIEAGAKDFIVKPFKEDRVKKAVKKIFNKD >Mature_121_residues SKKILIVDDAAFMRLTLKNLLENEGYDVIGEASNGQEAVELYQELEPDLVTLDITMPEMDGISALKEIKGIDPDAKIIMC SAMGQQSMVIEAIEAGAKDFIVKPFKEDRVKKAVKKIFNKD
Specific function: Has a central controlling role in chemotaxis. Although it is homologous to the CheY protein of other bacteria, it is thought to function in a different manner [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=114, Percent_Identity=36.8421052631579, Blast_Score=82, Evalue=7e-18, Organism=Escherichia coli, GI1790437, Length=113, Percent_Identity=37.1681415929204, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI1788191, Length=120, Percent_Identity=35, Blast_Score=74, Evalue=4e-15, Organism=Escherichia coli, GI1786599, Length=124, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=3e-13, Organism=Escherichia coli, GI1788222, Length=117, Percent_Identity=29.9145299145299, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI87082052, Length=116, Percent_Identity=31.8965517241379, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1790863, Length=122, Percent_Identity=31.9672131147541, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI1788192, Length=108, Percent_Identity=34.2592592592593, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1787375, Length=119, Percent_Identity=26.890756302521, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=31.858407079646, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1788521, Length=102, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=3e-11, Organism=Escherichia coli, GI1787487, Length=116, Percent_Identity=30.1724137931034, Blast_Score=59, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13550; Mature: 13419
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKILIVDDAAFMRLTLKNLLENEGYDVIGEASNGQEAVELYQELEPDLVTLDITMPEM CCCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGISALKEIKGIDPDAKIIMCSAMGQQSMVIEAIEAGAKDFIVKPFKEDRVKKAVKKIFN CHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCHHCEECCCHHHHHHHHHHHHHC KD CC >Mature Secondary Structure SKKILIVDDAAFMRLTLKNLLENEGYDVIGEASNGQEAVELYQELEPDLVTLDITMPEM CCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGISALKEIKGIDPDAKIIMCSAMGQQSMVIEAIEAGAKDFIVKPFKEDRVKKAVKKIFN CHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCHHCEECCCHHHHHHHHHHHHHC KD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1905718; 9384377; 1447979; 1597417; 8755892 [H]