Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is trkH [H]
Identifier: 220931903
GI number: 220931903
Start: 1150163
End: 1151596
Strand: Direct
Name: trkH [H]
Synonym: Hore_10610
Alternate gene names: 220931903
Gene position: 1150163-1151596 (Clockwise)
Preceding gene: 220931902
Following gene: 220931904
Centisome position: 44.61
GC content: 37.45
Gene sequence:
>1434_bases ATGAATTATAAAGCAATACTAAATATTCTGGGGACATTATTGATAATAGTGGCTGCGGCCATGATACTTCCTGTTCTTGT TGGGTTATATTACAGGGAAAAGGATATCTTTGCCTTTATAATTACATCTGGAATTACCTATTTGAGTGGGAAATTATTAA AAAAGTGCACATATGAGGGAAAGGGTTTACAGTATAAGGATGGTTTTGTTGTAGTTACCCTGGGATGGTTTTTGGTATCT ATTTACGGGGCCCTGCCCTTTTTAATCTCAGGTGTTTTTAAAAACCCAATTGATGCTTTTTTTGAATCTGTATCTGGTTT TACCACAACAGGAGCAACGGTGATAATGTCTCTGGAAAGTGTCAGTAAAACCGTTTTATTCTGGAGGAGTTTAACCCACT GGTTGGGTGGTATGGGAATTATTGTGATGACAATGGCAATACTGCCTGAGCTGGCAGGTAATATGCATCTATTTAAGGCT GAAGTTCCAGGTCCGCTTCACAACAGAATTCAGCCCCGAATTCAGGATACAGCCAAAACGCTGTGGCTGTTATATTTTTT TATAACAATATGTGAAATTATTTTACTGTGGATATCGGGGGTGCCTTTCTTTGAGTCAATAATTCATTCTTTTGGAACTG TCTCTACAGGAGGGTTTTCATCCCGGGCTTTAAGTGTCAAGGCCTATAACAGCCTGTTGGTTGATACGATAGTTACTTTT TTTATGTTTGTGGCCGGTACCAACTTTAATTTGATTTATGATTTGTTCAGAGGGAAAATAAGGACGTTTATAAAAGATGA AGAATTCAGGTTTTATATCTGGATACTGCTTATTGCTATTTTTCTTGTTTCAATTAATTTAATTTTTAATGTTTATGATA ATCCTAATGATGCAATCCGATATGCTTCATTCCAGGTGGTTTCCATATCGAGCACTACTGGATATGCTACTGTTGACTAT GATACCTGGCCTCCTTTTAGCCGCTGGATTTTATTGATATTGATGTTTATCGGGGGAAGTGCCGGGTCAACTGCCGGGGG AATAAAGGTAATTCGAATTAAGGTATTGTTTAAAAAAGGGTTACAGGAACTTTACTATTTACTCCACCCCCGGGCCATTA AAAAAATAAAAATTAATAAAATGGTTGTGTCTGAAAGGGTTTCAACAAGTATTCTCGGGTTTTTTTTTCTGTATATTATG GTTTTTGTAATGGTTACCGTAGTCCTGACCTACTTTGGTATAGATTTGATCAGTGCTATATCAGCAGTGGCTGCTACTCT GGGAAATATAGGACCTGGTCTGGAGCTGGTGGGACCGTTAAATTCATATTTACCATTCCCCGATTCTGCTAAATTATTAT TATCCTTCTGTATGATGTTGGGGAGACTTGAAATCTATACAATCCTGGTGTTTATGTTTATGGACTGGAGGTAA
Upstream 100 bases:
>100_bases ATTCTCTTATTATATATAGAGTTTATTGTTGTATTCCACCCCTCATATCTATTGTATCTTGAACATAATTATAGTTTAGA AAATTATGGGGTGGAATTAA
Downstream 100 bases:
>100_bases AATATAACATCAGAAAGTTATGTAAACTTTCTCTTGAAATTTTTATATATTTTGGTATAATCAAAAAAGCCAGTATAGGT CGGTTTTTGTCTTATTTTTT
Product: cation transporter
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MNYKAILNILGTLLIIVAAAMILPVLVGLYYREKDIFAFIITSGITYLSGKLLKKCTYEGKGLQYKDGFVVVTLGWFLVS IYGALPFLISGVFKNPIDAFFESVSGFTTTGATVIMSLESVSKTVLFWRSLTHWLGGMGIIVMTMAILPELAGNMHLFKA EVPGPLHNRIQPRIQDTAKTLWLLYFFITICEIILLWISGVPFFESIIHSFGTVSTGGFSSRALSVKAYNSLLVDTIVTF FMFVAGTNFNLIYDLFRGKIRTFIKDEEFRFYIWILLIAIFLVSINLIFNVYDNPNDAIRYASFQVVSISSTTGYATVDY DTWPPFSRWILLILMFIGGSAGSTAGGIKVIRIKVLFKKGLQELYYLLHPRAIKKIKINKMVVSERVSTSILGFFFLYIM VFVMVTVVLTYFGIDLISAISAVAATLGNIGPGLELVGPLNSYLPFPDSAKLLLSFCMMLGRLEIYTILVFMFMDWR
Sequences:
>Translated_477_residues MNYKAILNILGTLLIIVAAAMILPVLVGLYYREKDIFAFIITSGITYLSGKLLKKCTYEGKGLQYKDGFVVVTLGWFLVS IYGALPFLISGVFKNPIDAFFESVSGFTTTGATVIMSLESVSKTVLFWRSLTHWLGGMGIIVMTMAILPELAGNMHLFKA EVPGPLHNRIQPRIQDTAKTLWLLYFFITICEIILLWISGVPFFESIIHSFGTVSTGGFSSRALSVKAYNSLLVDTIVTF FMFVAGTNFNLIYDLFRGKIRTFIKDEEFRFYIWILLIAIFLVSINLIFNVYDNPNDAIRYASFQVVSISSTTGYATVDY DTWPPFSRWILLILMFIGGSAGSTAGGIKVIRIKVLFKKGLQELYYLLHPRAIKKIKINKMVVSERVSTSILGFFFLYIM VFVMVTVVLTYFGIDLISAISAVAATLGNIGPGLELVGPLNSYLPFPDSAKLLLSFCMMLGRLEIYTILVFMFMDWR >Mature_477_residues MNYKAILNILGTLLIIVAAAMILPVLVGLYYREKDIFAFIITSGITYLSGKLLKKCTYEGKGLQYKDGFVVVTLGWFLVS IYGALPFLISGVFKNPIDAFFESVSGFTTTGATVIMSLESVSKTVLFWRSLTHWLGGMGIIVMTMAILPELAGNMHLFKA EVPGPLHNRIQPRIQDTAKTLWLLYFFITICEIILLWISGVPFFESIIHSFGTVSTGGFSSRALSVKAYNSLLVDTIVTF FMFVAGTNFNLIYDLFRGKIRTFIKDEEFRFYIWILLIAIFLVSINLIFNVYDNPNDAIRYASFQVVSISSTTGYATVDY DTWPPFSRWILLILMFIGGSAGSTAGGIKVIRIKVLFKKGLQELYYLLHPRAIKKIKINKMVVSERVSTSILGFFFLYIM VFVMVTVVLTYFGIDLISAISAVAATLGNIGPGLELVGPLNSYLPFPDSAKLLLSFCMMLGRLEIYTILVFMFMDWR
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA and requires trkE for transport activity [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI48994987, Length=487, Percent_Identity=41.0677618069815, Blast_Score=308, Evalue=3e-85, Organism=Escherichia coli, GI1787626, Length=490, Percent_Identity=35.5102040816327, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 53511; Mature: 53511
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKAILNILGTLLIIVAAAMILPVLVGLYYREKDIFAFIITSGITYLSGKLLKKCTYEG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCC KGLQYKDGFVVVTLGWFLVSIYGALPFLISGVFKNPIDAFFESVSGFTTTGATVIMSLES CCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH VSKTVLFWRSLTHWLGGMGIIVMTMAILPELAGNMHLFKAEVPGPLHNRIQPRIQDTAKT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHH LWLLYFFITICEIILLWISGVPFFESIIHSFGTVSTGGFSSRALSVKAYNSLLVDTIVTF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHH FMFVAGTNFNLIYDLFRGKIRTFIKDEEFRFYIWILLIAIFLVSINLIFNVYDNPNDAIR HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHE YASFQVVSISSTTGYATVDYDTWPPFSRWILLILMFIGGSAGSTAGGIKVIRIKVLFKKG EEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHH LQELYYLLHPRAIKKIKINKMVVSERVSTSILGFFFLYIMVFVMVTVVLTYFGIDLISAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVAATLGNIGPGLELVGPLNSYLPFPDSAKLLLSFCMMLGRLEIYTILVFMFMDWR HHHHHHHHCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYKAILNILGTLLIIVAAAMILPVLVGLYYREKDIFAFIITSGITYLSGKLLKKCTYEG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCC KGLQYKDGFVVVTLGWFLVSIYGALPFLISGVFKNPIDAFFESVSGFTTTGATVIMSLES CCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH VSKTVLFWRSLTHWLGGMGIIVMTMAILPELAGNMHLFKAEVPGPLHNRIQPRIQDTAKT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHH LWLLYFFITICEIILLWISGVPFFESIIHSFGTVSTGGFSSRALSVKAYNSLLVDTIVTF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHH FMFVAGTNFNLIYDLFRGKIRTFIKDEEFRFYIWILLIAIFLVSINLIFNVYDNPNDAIR HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHE YASFQVVSISSTTGYATVDYDTWPPFSRWILLILMFIGGSAGSTAGGIKVIRIKVLFKKG EEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHH LQELYYLLHPRAIKKIKINKMVVSERVSTSILGFFFLYIMVFVMVTVVLTYFGIDLISAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVAATLGNIGPGLELVGPLNSYLPFPDSAKLLLSFCMMLGRLEIYTILVFMFMDWR HHHHHHHHCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]