Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
---|---|
Accession | NC_011896 |
Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is 221230837
Identifier: 221230837
GI number: 221230837
Start: 3010139
End: 3011566
Strand: Reverse
Name: 221230837
Synonym: MLBr_02528
Alternate gene names: NA
Gene position: 3011566-3010139 (Counterclockwise)
Preceding gene: 221230838
Following gene: 221230836
Centisome position: 92.15
GC content: 61.83
Gene sequence:
>1428_bases ATGATGCGGTCTGAACTTCGAATTGGGCTAGCCGGTATCGCAACGACTCTGGTCGTCTTCCAAGCAACATTGTTGCGAGG CTGTCCGTGGGCACTCGCAATCAGTCCGCCGGTAGTCGATCCAGGTGTACCACCGCCGAACGGCGCACCGGGACCCGTGC AGATAATGCAACAACGCGGCTCATGTATCACTTCCGGAGTCATCCCCGGCACCGATCTAGGTATCGTCACATCCAGTCAA TCGATGCTGAATCTTCCTGCAGCCTGGCAGTTTTCCCGCGGCGAGGGTCAATTGGTGGCGATCGTCGATACTGGGGTACG GCCAGGACCGCGACTGCCCAACGTCGAGGCCGGCGGCGACTATGTGGAATCGAGCGACGGCTTGACCGATTGCGACGGGC ACGGAACCCTGGTCGCTGGGATAGTCGCCGGCCAACCCGCTCCTTCTGGTGAGGACGGTTTTTCGGGTGTCGCACCCGCG GCGCGATTGCTGTCCATCCGGGTGACCTCCGCCAAGTTCTCACTGCGATCGCTAGGTGGCGATCCACAGCTTAAGCAGGC GTCCCTCGAGGTGACCAGGCTCAGCCGAGCTATTGTACATGCTGCAGACCTCGGTGCGCGGGTGATTAACATCTCTGCGA TAACTTGCTTGCCCGCCGATCGGTCCATTGACCAGTCCGGGCTTGGTGCTGCGATCCGCTATGCGGCAGTGGACAAGGAT GCCCTGCTCGTGGCTCCGGCGGGCAATGCCGGGTCGACCGGAACGGTTGGTGGTAACATGAACTGCGAGTCCAACCCACT CACTGACCTGGGCCGCCCGGACGATCCGCGGAACTGGGCGAGCGTCACCTCGGTCTCCATTCCGTCGTGGTGGCAGCCAT ACGTGCTATCGGTGGCGTCGCTGACACCGAGTGGGCGGCCATCGAAATTCACTATGGCCGGGCCGTGGGTGGGTATTGCG GCGCCGGGCGAAAATATTGTTTCGGTGAGCAACCGTGACAGTGGAGATCTGGCTAACGCCCTGCCTAACGATCGGGACCA ACAGATCGCGCTGAACGGCACCAGCTATGCTGCCGGCTACGTCTCGGGAGTCGCGGCGTTAGTTCGCAGCAAATATCCGG AACTGACCGCTAAACAGGTGATGCGCCGTATAACCGCGACTGCGCACACCGGTGCCCGGACGCTCTCCAACGTCGTTGGC TCCGGTACTTTGGATTCTGTGGCAGCACTGACCTGGGACCTGCCCGCAACCAACGACTCGCCGCCAGTCCCAGTAAAGCT GGTTACTGTACCGCCGCCGCCAGCACCGAAGGACAACACGCCGCGAAACGTTGCATTTGCCGGGACTGCCACATTGGTTA TGGTGGTCGCGGCCGTAGTCGGGACTGCCACGATTGCTGCGCGTCGCCGAGAGGGTACCACCCCGTGA
Upstream 100 bases:
>100_bases CTTGGCATGGTCGCCTCCGGTCTTGATGCTTCACTGATCCCCGCCATGGCCTATCTGGTTAGTCTTTTCAGCTGGGTACT CAATCGATGATGCGGTATCG
Downstream 100 bases:
>100_bases GTGCGCACCGATCACGCCCGGCTGCTATGTGGCCGGGCAGCAGCCGGATTACGCTGGCGCTGCTGGCCGTCATGCCCGCG CTTATGGCGTACCCTTGGTG
Product: putative protease
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MMRSELRIGLAGIATTLVVFQATLLRGCPWALAISPPVVDPGVPPPNGAPGPVQIMQQRGSCITSGVIPGTDLGIVTSSQ SMLNLPAAWQFSRGEGQLVAIVDTGVRPGPRLPNVEAGGDYVESSDGLTDCDGHGTLVAGIVAGQPAPSGEDGFSGVAPA ARLLSIRVTSAKFSLRSLGGDPQLKQASLEVTRLSRAIVHAADLGARVINISAITCLPADRSIDQSGLGAAIRYAAVDKD ALLVAPAGNAGSTGTVGGNMNCESNPLTDLGRPDDPRNWASVTSVSIPSWWQPYVLSVASLTPSGRPSKFTMAGPWVGIA APGENIVSVSNRDSGDLANALPNDRDQQIALNGTSYAAGYVSGVAALVRSKYPELTAKQVMRRITATAHTGARTLSNVVG SGTLDSVAALTWDLPATNDSPPVPVKLVTVPPPPAPKDNTPRNVAFAGTATLVMVVAAVVGTATIAARRREGTTP
Sequences:
>Translated_475_residues MMRSELRIGLAGIATTLVVFQATLLRGCPWALAISPPVVDPGVPPPNGAPGPVQIMQQRGSCITSGVIPGTDLGIVTSSQ SMLNLPAAWQFSRGEGQLVAIVDTGVRPGPRLPNVEAGGDYVESSDGLTDCDGHGTLVAGIVAGQPAPSGEDGFSGVAPA ARLLSIRVTSAKFSLRSLGGDPQLKQASLEVTRLSRAIVHAADLGARVINISAITCLPADRSIDQSGLGAAIRYAAVDKD ALLVAPAGNAGSTGTVGGNMNCESNPLTDLGRPDDPRNWASVTSVSIPSWWQPYVLSVASLTPSGRPSKFTMAGPWVGIA APGENIVSVSNRDSGDLANALPNDRDQQIALNGTSYAAGYVSGVAALVRSKYPELTAKQVMRRITATAHTGARTLSNVVG SGTLDSVAALTWDLPATNDSPPVPVKLVTVPPPPAPKDNTPRNVAFAGTATLVMVVAAVVGTATIAARRREGTTP >Mature_475_residues MMRSELRIGLAGIATTLVVFQATLLRGCPWALAISPPVVDPGVPPPNGAPGPVQIMQQRGSCITSGVIPGTDLGIVTSSQ SMLNLPAAWQFSRGEGQLVAIVDTGVRPGPRLPNVEAGGDYVESSDGLTDCDGHGTLVAGIVAGQPAPSGEDGFSGVAPA ARLLSIRVTSAKFSLRSLGGDPQLKQASLEVTRLSRAIVHAADLGARVINISAITCLPADRSIDQSGLGAAIRYAAVDKD ALLVAPAGNAGSTGTVGGNMNCESNPLTDLGRPDDPRNWASVTSVSIPSWWQPYVLSVASLTPSGRPSKFTMAGPWVGIA APGENIVSVSNRDSGDLANALPNDRDQQIALNGTSYAAGYVSGVAALVRSKYPELTAKQVMRRITATAHTGARTLSNVVG SGTLDSVAALTWDLPATNDSPPVPVKLVTVPPPPAPKDNTPRNVAFAGTATLVMVVAAVVGTATIAARRREGTTP
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 48627; Mature: 48627
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRSELRIGLAGIATTLVVFQATLLRGCPWALAISPPVVDPGVPPPNGAPGPVQIMQQRG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC SCITSGVIPGTDLGIVTSSQSMLNLPAAWQFSRGEGQLVAIVDTGVRPGPRLPNVEAGGD CEEECCCCCCCCCEEEECCHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC YVESSDGLTDCDGHGTLVAGIVAGQPAPSGEDGFSGVAPAARLLSIRVTSAKFSLRSLGG EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHEEEEEEECHHHHHHHCCC DPQLKQASLEVTRLSRAIVHAADLGARVINISAITCLPADRSIDQSGLGAAIRYAAVDKD CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCC ALLVAPAGNAGSTGTVGGNMNCESNPLTDLGRPDDPRNWASVTSVSIPSWWQPYVLSVAS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHH LTPSGRPSKFTMAGPWVGIAAPGENIVSVSNRDSGDLANALPNDRDQQIALNGTSYAAGY CCCCCCCCEEEECCCEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCEEEECCCCHHHHH VSGVAALVRSKYPELTAKQVMRRITATAHTGARTLSNVVGSGTLDSVAALTWDLPATNDS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCC PPVPVKLVTVPPPPAPKDNTPRNVAFAGTATLVMVVAAVVGTATIAARRREGTTP CCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMRSELRIGLAGIATTLVVFQATLLRGCPWALAISPPVVDPGVPPPNGAPGPVQIMQQRG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC SCITSGVIPGTDLGIVTSSQSMLNLPAAWQFSRGEGQLVAIVDTGVRPGPRLPNVEAGGD CEEECCCCCCCCCEEEECCHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC YVESSDGLTDCDGHGTLVAGIVAGQPAPSGEDGFSGVAPAARLLSIRVTSAKFSLRSLGG EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHEEEEEEECHHHHHHHCCC DPQLKQASLEVTRLSRAIVHAADLGARVINISAITCLPADRSIDQSGLGAAIRYAAVDKD CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCC ALLVAPAGNAGSTGTVGGNMNCESNPLTDLGRPDDPRNWASVTSVSIPSWWQPYVLSVAS EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHH LTPSGRPSKFTMAGPWVGIAAPGENIVSVSNRDSGDLANALPNDRDQQIALNGTSYAAGY CCCCCCCCEEEECCCEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCEEEECCCCHHHHH VSGVAALVRSKYPELTAKQVMRRITATAHTGARTLSNVVGSGTLDSVAALTWDLPATNDS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCC PPVPVKLVTVPPPPAPKDNTPRNVAFAGTATLVMVVAAVVGTATIAARRREGTTP CCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]