Definition Mycobacterium leprae Br4923 chromosome, complete genome.
Accession NC_011896
Length 3,268,071

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The map label for this gene is eccD3 [H]

Identifier: 221230838

GI number: 221230838

Start: 3011577

End: 3013034

Strand: Reverse

Name: eccD3 [H]

Synonym: MLBr_02529

Alternate gene names: 221230838

Gene position: 3013034-3011577 (Counterclockwise)

Preceding gene: 221230839

Following gene: 221230837

Centisome position: 92.2

GC content: 61.73

Gene sequence:

>1458_bases
ATGGTGTACGTCTTTGCAGAAGAATTTTGCGAGGGCCCGGTGACGTCCGGTGCCGTCATGCCGATAGTCCGCGTCGCCAT
TCTCGCGGACAGCCGGTTGATAGAAATGGCTCTGCCCACCGAATTGCCGTTGCGCGAAATCCTTCCCGCGGTAAAGCGTT
TGGTGGTTCCTGCAGCGTCGGATAATGATTCTCCGCTGGCTGCCAACGCGAGTTTGCACCTGAGCCTGGCTCCCATCGGT
GGAGCACCATTCAGCCTGGATGCCAGCCTGGACACCGTTGGAGTCGTCGACGGTGATCTGCTCGCATTGCAGCCGGTGCC
AGTCGGTCCGGCGGCGCCCGGTATTGTCGAGGATATCGCCGATGCCGCGATGATCTTCTCGACAGCCCGGCTACAGTCGT
GGGGCCCGACGCATATTCGACGCGGGGCCCTGGCCGCGACGACCGCTGTGACCTTTGCGGCAACTGGGCTGGGTGTCACC
TATCGGGCAGTCACCGGTGCGTTGACCGGATTGCTCGTGGTCATTGTGATCGCGGTGCTCATCGCATTGGGTGGTTTGGT
CCTTAGGTCACGTGCGGCGCGCACTGGGTTGGTACTGTCGATCGCAGCGCTGGTACCCATTGGTGCCGTCTTTGCGCTGG
CGGTACCCGGCATATTCGGGCCAGCGCAGGTGTTGTTAGCCTCCGCCGGCGTTACCGCGTGGTCGCTAATTGCTCTGATC
GTTCCTGGTCCTGAACGCGTGCGGATCGTTGCCTTTTTCACTGCTACTGTGGTGATCGGGGTTGCTGTGATGCTGGAGGC
CGGCGCTGCATTGCTCTGGCAGCTAACGCCATTGACCATTGGCTGTGGCTTGATTCTGGCTGCTTTGCTGGTTACTGTCG
AGGCGGCTCAGCTCTCCGCATTGTGGGCGCGGTTCCCATTGCCTGTGATCCCGGCACCGGGTGATCCGACCCCGTCGGCG
CCGTCGTTTCAGGTGCTTGAGGACTTGCCGCGTCGGGTGCGCATCAGCTCTGCTCATCAGAGCGGTTTTATCGCCGCCGC
CACGTTGCTCAGCATGCTAGGCTCGGTGGCGATCGCATTGCGTCCTGAGGCGGTGAGCAGTGTGGGCTGGTACTTGGTAG
CCGCAACCGCGGTTGCCGCTACACTGCGTGCCCGGGTGTGGGATTCGGTCGCCTGTAAAGCCTGGTTGCTTGCCCAGCCG
TATTTGGTCGCCAGCGTGCTGCTGGGGCTTTACACCGCTACGGGACGTTACGTCGCTGCTTCCGCTGCGCTGCTGGTGCT
TGTCGTGGTTGTGTTGGCATGGGCGGTGGTCGCACTCAACCCGCGGATCGCCTCGTCGGATAGCTATTCGCTGCCATTGC
GCCGTCTGCTTGGCATGGTCGCCTCCGGTCTTGATGCTTCACTGATCCCCGCCATGGCCTATCTGGTTAGTCTTTTCAGC
TGGGTACTCAATCGATGA

Upstream 100 bases:

>100_bases
CGATTCAAAACAGTCGGGTGACACAGCGTAGTAGTAGTGAAAACCATGGCCGTGCAGGCGATGCGGTCGTCATAGATAGA
GAGAAAACGATGTACCAAGT

Downstream 100 bases:

>100_bases
TGCGGTATCGATGATGCGGTCTGAACTTCGAATTGGGCTAGCCGGTATCGCAACGACTCTGGTCGTCTTCCAAGCAACAT
TGTTGCGAGGCTGTCCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: ESX conserved component D3; Type VII secretion system protein eccD3; T7SS protein eccD3 [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MVYVFAEEFCEGPVTSGAVMPIVRVAILADSRLIEMALPTELPLREILPAVKRLVVPAASDNDSPLAANASLHLSLAPIG
GAPFSLDASLDTVGVVDGDLLALQPVPVGPAAPGIVEDIADAAMIFSTARLQSWGPTHIRRGALAATTAVTFAATGLGVT
YRAVTGALTGLLVVIVIAVLIALGGLVLRSRAARTGLVLSIAALVPIGAVFALAVPGIFGPAQVLLASAGVTAWSLIALI
VPGPERVRIVAFFTATVVIGVAVMLEAGAALLWQLTPLTIGCGLILAALLVTVEAAQLSALWARFPLPVIPAPGDPTPSA
PSFQVLEDLPRRVRISSAHQSGFIAAATLLSMLGSVAIALRPEAVSSVGWYLVAATAVAATLRARVWDSVACKAWLLAQP
YLVASVLLGLYTATGRYVAASAALLVLVVVVLAWAVVALNPRIASSDSYSLPLRRLLGMVASGLDASLIPAMAYLVSLFS
WVLNR

Sequences:

>Translated_485_residues
MVYVFAEEFCEGPVTSGAVMPIVRVAILADSRLIEMALPTELPLREILPAVKRLVVPAASDNDSPLAANASLHLSLAPIG
GAPFSLDASLDTVGVVDGDLLALQPVPVGPAAPGIVEDIADAAMIFSTARLQSWGPTHIRRGALAATTAVTFAATGLGVT
YRAVTGALTGLLVVIVIAVLIALGGLVLRSRAARTGLVLSIAALVPIGAVFALAVPGIFGPAQVLLASAGVTAWSLIALI
VPGPERVRIVAFFTATVVIGVAVMLEAGAALLWQLTPLTIGCGLILAALLVTVEAAQLSALWARFPLPVIPAPGDPTPSA
PSFQVLEDLPRRVRISSAHQSGFIAAATLLSMLGSVAIALRPEAVSSVGWYLVAATAVAATLRARVWDSVACKAWLLAQP
YLVASVLLGLYTATGRYVAASAALLVLVVVVLAWAVVALNPRIASSDSYSLPLRRLLGMVASGLDASLIPAMAYLVSLFS
WVLNR
>Mature_485_residues
MVYVFAEEFCEGPVTSGAVMPIVRVAILADSRLIEMALPTELPLREILPAVKRLVVPAASDNDSPLAANASLHLSLAPIG
GAPFSLDASLDTVGVVDGDLLALQPVPVGPAAPGIVEDIADAAMIFSTARLQSWGPTHIRRGALAATTAVTFAATGLGVT
YRAVTGALTGLLVVIVIAVLIALGGLVLRSRAARTGLVLSIAALVPIGAVFALAVPGIFGPAQVLLASAGVTAWSLIALI
VPGPERVRIVAFFTATVVIGVAVMLEAGAALLWQLTPLTIGCGLILAALLVTVEAAQLSALWARFPLPVIPAPGDPTPSA
PSFQVLEDLPRRVRISSAHQSGFIAAATLLSMLGSVAIALRPEAVSSVGWYLVAATAVAATLRARVWDSVACKAWLLAQP
YLVASVLLGLYTATGRYVAASAALLVLVVVVLAWAVVALNPRIASSDSYSLPLRRLLGMVASGLDASLIPAMAYLVSLFS
WVLNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eccD/snm4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006707 [H]

Pfam domain/function: PF04600 DUF571 [H]

EC number: NA

Molecular weight: Translated: 49867; Mature: 49867

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYVFAEEFCEGPVTSGAVMPIVRVAILADSRLIEMALPTELPLREILPAVKRLVVPAAS
CEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHCCCCCC
DNDSPLAANASLHLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPVGPAAPGIVEDIA
CCCCCEEECCEEEEEEEECCCCCEEECCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHH
DAAMIFSTARLQSWGPTHIRRGALAATTAVTFAATGLGVTYRAVTGALTGLLVVIVIAVL
HHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IALGGLVLRSRAARTGLVLSIAALVPIGAVFALAVPGIFGPAQVLLASAGVTAWSLIALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHE
VPGPERVRIVAFFTATVVIGVAVMLEAGAALLWQLTPLTIGCGLILAALLVTVEAAQLSA
ECCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWARFPLPVIPAPGDPTPSAPSFQVLEDLPRRVRISSAHQSGFIAAATLLSMLGSVAIAL
HHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHEEEE
RPEAVSSVGWYLVAATAVAATLRARVWDSVACKAWLLAQPYLVASVLLGLYTATGRYVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHH
SAALLVLVVVVLAWAVVALNPRIASSDSYSLPLRRLLGMVASGLDASLIPAMAYLVSLFS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
WVLNR
HHHCC
>Mature Secondary Structure
MVYVFAEEFCEGPVTSGAVMPIVRVAILADSRLIEMALPTELPLREILPAVKRLVVPAAS
CEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHCCCCCC
DNDSPLAANASLHLSLAPIGGAPFSLDASLDTVGVVDGDLLALQPVPVGPAAPGIVEDIA
CCCCCEEECCEEEEEEEECCCCCEEECCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHH
DAAMIFSTARLQSWGPTHIRRGALAATTAVTFAATGLGVTYRAVTGALTGLLVVIVIAVL
HHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IALGGLVLRSRAARTGLVLSIAALVPIGAVFALAVPGIFGPAQVLLASAGVTAWSLIALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHE
VPGPERVRIVAFFTATVVIGVAVMLEAGAALLWQLTPLTIGCGLILAALLVTVEAAQLSA
ECCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWARFPLPVIPAPGDPTPSAPSFQVLEDLPRRVRISSAHQSGFIAAATLLSMLGSVAIAL
HHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHEEEE
RPEAVSSVGWYLVAATAVAATLRARVWDSVACKAWLLAQPYLVASVLLGLYTATGRYVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHH
SAALLVLVVVVLAWAVVALNPRIASSDSYSLPLRRLLGMVASGLDASLIPAMAYLVSLFS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
WVLNR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]