Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
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Accession | NC_011896 |
Length | 3,268,071 |
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The map label for this gene is 221230810
Identifier: 221230810
GI number: 221230810
Start: 2936649
End: 2937443
Strand: Reverse
Name: 221230810
Synonym: MLBr_02463
Alternate gene names: NA
Gene position: 2937443-2936649 (Counterclockwise)
Preceding gene: 221230813
Following gene: 221230809
Centisome position: 89.88
GC content: 57.86
Gene sequence:
>795_bases GTGAGCCTAGACAAGATAATGATGCCGGTTCCCGAAGGTCATCCCGATGTGTTTGATCGTGAATGGCCGCTTCGCGTAGG GGACATCGACCGCACCGGTCGGCTGCGATTAGACGCAGGTGTCCGGCATATCCAAGACATCGGTCAGGATCAACTGCGCG AGATGGGGTTCGAGGAGACCCACCCGCTGTGGATTGTGCGCCGCACCATGGTTGACTTGATCCGTCCGGTTGAGTTCCAG GAAATGTTGCGGCTGCGGCGGTGGTGTTCGGGTACCTCGAACCGGTGGTGTGAAATGCGTGTCCGTATCGATGGGCGCAA GGGTGGCCTCATCGAGTCCGAGGCGTTTTGGATCAACATCAACCGGGAAACTCAGATGCCGGCCCGCATCGCGGACGACT TCCTGGCGGGCCTGCACAGGACCACGTCCGTCGATAGGCTGCGGTGGAGGGGCTATTTGCAGCCGGGTAGCCGTGACGAT GCGTCGGAAATCCACGAGTTCCCGGTGCGGGTAACTGATATTGACTTGTTCGATCACATGAACAATTCGGTGTACTGGAG CGTGATCGAGGACTATTTGGTGTCTCACTCCGAACTACTCAAAGGGCCGCTCCGCACCACCATCGAACATGAGGCTCCCG TTGCGCTGGGCGACAAGTTGGAGATCGTTTTGCACGTTCACCCTGCTGGCTCGACTGATCAATTCGGTCCTGGCTTGGTT GACCGCTCTGTTATAACGCTCACATATACGGTTGGCGACGAGACTAAAGCCATCGCTGCGATCTTCGCGCTGTAG
Upstream 100 bases:
>100_bases CGTTTCATGTTCGACTGGTATTTGACAGACGTCGTTTGGCATAATTCGGTTCGGGGCTAAGACCTTGGGGTGTGGACGAG TAGGAAACGGGGCCGATGCC
Downstream 100 bases:
>100_bases CGAAATCGTAAGCCGGGCAACTCTCGGAAAATTCTTGGTTGACCTGCTGATTTGTGGTTACTGAACGGTAGTTTCTGAAA TGGTTTAGCGCCTTTGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSLDKIMMPVPEGHPDVFDREWPLRVGDIDRTGRLRLDAGVRHIQDIGQDQLREMGFEETHPLWIVRRTMVDLIRPVEFQ EMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWININRETQMPARIADDFLAGLHRTTSVDRLRWRGYLQPGSRDD ASEIHEFPVRVTDIDLFDHMNNSVYWSVIEDYLVSHSELLKGPLRTTIEHEAPVALGDKLEIVLHVHPAGSTDQFGPGLV DRSVITLTYTVGDETKAIAAIFAL
Sequences:
>Translated_264_residues MSLDKIMMPVPEGHPDVFDREWPLRVGDIDRTGRLRLDAGVRHIQDIGQDQLREMGFEETHPLWIVRRTMVDLIRPVEFQ EMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWININRETQMPARIADDFLAGLHRTTSVDRLRWRGYLQPGSRDD ASEIHEFPVRVTDIDLFDHMNNSVYWSVIEDYLVSHSELLKGPLRTTIEHEAPVALGDKLEIVLHVHPAGSTDQFGPGLV DRSVITLTYTVGDETKAIAAIFAL >Mature_263_residues SLDKIMMPVPEGHPDVFDREWPLRVGDIDRTGRLRLDAGVRHIQDIGQDQLREMGFEETHPLWIVRRTMVDLIRPVEFQE MLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWININRETQMPARIADDFLAGLHRTTSVDRLRWRGYLQPGSRDDA SEIHEFPVRVTDIDLFDHMNNSVYWSVIEDYLVSHSELLKGPLRTTIEHEAPVALGDKLEIVLHVHPAGSTDQFGPGLVD RSVITLTYTVGDETKAIAAIFAL
Specific function: Unknown
COG id: COG3884
COG function: function code I; Acyl-ACP thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002864 [H]
Pfam domain/function: PF01643 Acyl-ACP_TE [H]
EC number: NA
Molecular weight: Translated: 30364; Mature: 30233
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDKIMMPVPEGHPDVFDREWPLRVGDIDRTGRLRLDAGVRHIQDIGQDQLREMGFEET CCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHCCHHHHHHCCCCCC HPLWIVRRTMVDLIRPVEFQEMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWINI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCEEEEEE NRETQMPARIADDFLAGLHRTTSVDRLRWRGYLQPGSRDDASEIHEFPVRVTDIDLFDHM CCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCHHHHHHCCCEEEEEHHHHHC NNSVYWSVIEDYLVSHSELLKGPLRTTIEHEAPVALGDKLEIVLHVHPAGSTDQFGPGLV CCCEEHHHHHHHHHCHHHHHCCHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCCCCCC DRSVITLTYTVGDETKAIAAIFAL CCEEEEEEEEECCCHHHHHHEECC >Mature Secondary Structure SLDKIMMPVPEGHPDVFDREWPLRVGDIDRTGRLRLDAGVRHIQDIGQDQLREMGFEET CCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHCCHHHHHHCCCCCC HPLWIVRRTMVDLIRPVEFQEMLRLRRWCSGTSNRWCEMRVRIDGRKGGLIESEAFWINI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCEEEEEE NRETQMPARIADDFLAGLHRTTSVDRLRWRGYLQPGSRDDASEIHEFPVRVTDIDLFDHM CCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCHHHHHHCCCEEEEEHHHHHC NNSVYWSVIEDYLVSHSELLKGPLRTTIEHEAPVALGDKLEIVLHVHPAGSTDQFGPGLV CCCEEHHHHHHHHHCHHHHHCCHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCCCCCC DRSVITLTYTVGDETKAIAAIFAL CCEEEEEEEEECCCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]