Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
---|---|
Accession | NC_011896 |
Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is 221230805
Identifier: 221230805
GI number: 221230805
Start: 2927608
End: 2927895
Strand: Reverse
Name: 221230805
Synonym: MLBr_02453
Alternate gene names: NA
Gene position: 2927895-2927608 (Counterclockwise)
Preceding gene: 221230806
Following gene: 221230804
Centisome position: 89.59
GC content: 57.99
Gene sequence:
>288_bases ATGAGCCACCTCGTGGGTACTGTCATGTTGGTCTTGCAGCTCGCCGTTCTGGTGACGGCGGTGTACGCGTTTGTGCATGC AGCGCTGCAGCGACCCGACGCCTATACCGCCGCTGAAAAGCTGACAAAACCGGTATGGTTAGTGATCCTCGGTGCGGCTG TGTCGCTGACCTCTATCCTAGGCTTCGTCTTCGGTGTGCTTGGCATAGTGATAGCCGCCTGTGCCGCTGGGGTCTATCTG GTTGACGTACGGCCCAAGCTGCTCGATATTCAGGGCAAATCGCGCTAA
Upstream 100 bases:
>100_bases CTGGTGTGGTGGCTCGGACCGGTAACGCATTTGATCCGAGTTGTCCTGGTGGCGTACTCGGAGTCGACGTTTGGGACGGT CTCCGCATACGCTTATCAAG
Downstream 100 bases:
>100_bases ACCGAGTGACTGTTCTTTCGGCCGCGTCGGCGGCGGTACTTGTTGGCGTACTCGGCTCGCTAGTAGCGTGCAGTTTACGC TTTGGCCGATCCGGACACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSHLVGTVMLVLQLAVLVTAVYAFVHAALQRPDAYTAAEKLTKPVWLVILGAAVSLTSILGFVFGVLGIVIAACAAGVYL VDVRPKLLDIQGKSR
Sequences:
>Translated_95_residues MSHLVGTVMLVLQLAVLVTAVYAFVHAALQRPDAYTAAEKLTKPVWLVILGAAVSLTSILGFVFGVLGIVIAACAAGVYL VDVRPKLLDIQGKSR >Mature_94_residues SHLVGTVMLVLQLAVLVTAVYAFVHAALQRPDAYTAAEKLTKPVWLVILGAAVSLTSILGFVFGVLGIVIAACAAGVYLV DVRPKLLDIQGKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0476 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019662 [H]
Pfam domain/function: PF10724 DUF2516 [H]
EC number: NA
Molecular weight: Translated: 10004; Mature: 9873
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLVGTVMLVLQLAVLVTAVYAFVHAALQRPDAYTAAEKLTKPVWLVILGAAVSLTSIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVFGVLGIVIAACAAGVYLVDVRPKLLDIQGKSR HHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCC >Mature Secondary Structure SHLVGTVMLVLQLAVLVTAVYAFVHAALQRPDAYTAAEKLTKPVWLVILGAAVSLTSIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVFGVLGIVIAACAAGVYLVDVRPKLLDIQGKSR HHHHHHHHHHHHHHHCCCCEEECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]