Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
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Accession | NC_011896 |
Length | 3,268,071 |
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The map label for this gene is hbhA
Identifier: 221230806
GI number: 221230806
Start: 2928015
End: 2928581
Strand: Reverse
Name: hbhA
Synonym: MLBr_02454
Alternate gene names: 221230806
Gene position: 2928581-2928015 (Counterclockwise)
Preceding gene: 221230809
Following gene: 221230805
Centisome position: 89.61
GC content: 64.2
Gene sequence:
>567_bases ATGGCTGAAAACCCTAACGTCGACGACCTGCGGGCGCCATTGTTGGCAGCGCTGGGCGCGGCAGACTTGGCCCTGACCAC CGTTAATGAGCTGGTCGGCAACATGCGCGAACGTGCCGAAGAAACCCGCATCGATACCCGCAGCCGTGTTGAGGAGAGCC GCGCTCGCGTGGCAAAACTGCAGGAGGTTCTGCCCGAACACCTTAGCGAGCTGCGTGAGAAGTTCACCGCCGACGAGTTG CGTAAGGCCGCTGAGGGCTATTTGGAGGCAGCGACCAACCGGTACAACGAGCTAGTCGAGCGCGGCGAGGCCGCCCTGGA GCGGTTACGCAGCCGGCCGGTTTTCGAAGATGCGTCGGCACGTGCCGAGGGTTACGTGGACCAGGCTGTCGAGTTGACTC AGGAGGCGCTGGGTACTGTCGCGTCGCAGACCCGCGCGGTTGGCGGGCGTGCAGCCAAACTGGTCGGCATCGAGCTACCC AAGAAGGCGGCGGCGCCTGCGAGGAAGGCTCCGGCCAAGAAGGCGCCTGCGAAGAAGGCTCCGGCCAAGAAGGTCACACA GAAATAG
Upstream 100 bases:
>100_bases AGTCTTGACTACTCCTCCCAGAGGAGCCGACGCTTGGCCTAACTCTCGGGCCAGATACTACTGACGCCTATAACGACAAC AATCCATGAAAGGAAACACC
Downstream 100 bases:
>100_bases GTTCAGGTTCCGAATTACCCTGGTGTGGTGGCTCGGACCGGTAACGCATTTGATCCGAGTTGTCCTGGTGGCGTACTCGG AGTCGACGTTTGGGACGGTC
Product: putative hemagglutinin
Products: NA
Alternate protein names: Adhesin
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAENPNVDDLRAPLLAALGAADLALTTVNELVGNMRERAEETRIDTRSRVEESRARVAKLQEVLPEHLSELREKFTADEL RKAAEGYLEAATNRYNELVERGEAALERLRSRPVFEDASARAEGYVDQAVELTQEALGTVASQTRAVGGRAAKLVGIELP KKAAAPARKAPAKKAPAKKAPAKKVTQK
Sequences:
>Translated_188_residues MAENPNVDDLRAPLLAALGAADLALTTVNELVGNMRERAEETRIDTRSRVEESRARVAKLQEVLPEHLSELREKFTADEL RKAAEGYLEAATNRYNELVERGEAALERLRSRPVFEDASARAEGYVDQAVELTQEALGTVASQTRAVGGRAAKLVGIELP KKAAAPARKAPAKKAPAKKAPAKKVTQK >Mature_187_residues AENPNVDDLRAPLLAALGAADLALTTVNELVGNMRERAEETRIDTRSRVEESRARVAKLQEVLPEHLSELREKFTADELR KAAEGYLEAATNRYNELVERGEAALERLRSRPVFEDASARAEGYVDQAVELTQEALGTVASQTRAVGGRAAKLVGIELPK KAAAPARKAPAKKAPAKKAPAKKVTQK
Specific function: Might mediate adherence to host cells by binding sulfated glycoconjugates
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis hbhA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HBHA_MYCLE (Q9CB42)
Other databases:
- EMBL: AL583925 - PIR: C87216 - RefSeq: NP_302592.1 - EnsemblBacteria: EBMYCT00000028400 - GeneID: 908523 - GenomeReviews: AL450380_GR - KEGG: mle:ML2454 - NMPDR: fig|272631.1.peg.1464 - Leproma: ML2454 - GeneTree: EBGT00050000014974 - HOGENOM: HBG569842 - OMA: PTTEELR - ProtClustDB: CLSK790542 - BioCyc: MLEP272631:ML2454-MONOMER - GO: GO:0009405 - InterPro: IPR020340 - ProDom: PD082580
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20421; Mature: 20290
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENPNVDDLRAPLLAALGAADLALTTVNELVGNMRERAEETRIDTRSRVEESRARVAKL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEVLPEHLSELREKFTADELRKAAEGYLEAATNRYNELVERGEAALERLRSRPVFEDASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RAEGYVDQAVELTQEALGTVASQTRAVGGRAAKLVGIELPKKAAAPARKAPAKKAPAKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCC PAKKVTQK CHHHHCCC >Mature Secondary Structure AENPNVDDLRAPLLAALGAADLALTTVNELVGNMRERAEETRIDTRSRVEESRARVAKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEVLPEHLSELREKFTADELRKAAEGYLEAATNRYNELVERGEAALERLRSRPVFEDASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RAEGYVDQAVELTQEALGTVASQTRAVGGRAAKLVGIELPKKAAAPARKAPAKKAPAKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCC PAKKVTQK CHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002