Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
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Accession | NC_011896 |
Length | 3,268,071 |
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The map label for this gene is hemB
Identifier: 221230778
GI number: 221230778
Start: 2893697
End: 2894686
Strand: Reverse
Name: hemB
Synonym: MLBr_02419
Alternate gene names: 221230778
Gene position: 2894686-2893697 (Counterclockwise)
Preceding gene: 221230779
Following gene: 221230777
Centisome position: 88.57
GC content: 61.41
Gene sequence:
>990_bases GTGAGCGTCAGTGGTTACCCGCGGCACCGGCCGCGCCGGCTTCGCTCAACCCCCGCGATGCGCCGCCTGGTGGCGCAGAC TTCTCTGGAGCCAAGGAATTTGGTGCTGCCGATGTTCGTTGCTGACGGTATTGACGAGCTGCGGCCAATTGCTTCCATGC CGGGTGTTGTGCAGCACACCCGGGATTCGCTGCGTCGCGCTGCTGTCGCTGCCGTCGATGCCGGGGTAGGTGGATTGAAC CTGTTTGGCGTGCCCCGCGACCAGGATAAGGATGCAACTGGCTCGGCTGGGGTAGATCCCGATGGCATCCTCAATGTCGC TCTTCGCGATCTGGCCGAGGATCTCGGTGATGCCACCGTGTTGATGGCCGACACCTGTCTGGACGAGTTTACCGACCACG GGCACTGCGGCGTCCTAGACGGGCAGGGCCGAGTGGACAACGACGCCACCGTGGCACGGTATGTGGAACTTGCTGTGGCA CAAGCGGAATCCGGTGCTAACGTGGTTGGTCCGAGCGGGATGATGGACGGCCAAATAGGTGCGCTCCGAGACGGACTTGA CAGTGCAGGCTATGCCGACGTAGCGATCCTGGCTTACGCTGCGAAGTTTTCTTCGGCGTTCTACGGACCATTCCGCGAGG CGGTGAGCTGCAGCTTGTCCGGTGACCGACGCACCTACCAGCAGGAACCAGGCAATGCCCGCGAGGCGTTGCGCGAAATC AAGTTGGATCTCGACGAGGGTGCAGACATTATCATGATCAAACCCGCTTCGGGGTATCTGGACGTCGTTGCTACGGCAGC CGGTGTTTCGCCGGTTCCGGTAGCTGCCTATCAAGTCTCGGGGGAGTACGCGATGATTTGCGCTGCGGCCGCAAACAACT GGATTGACGAACGTGCCGCTGTGCTGGAGTCGTTGACAAGTATCCGGCGCGCTGGGGCGGATATCGTGTTCACCTATTGG GCCGCTGATGTGGCGTGTTGGCTTTCTTGA
Upstream 100 bases:
>100_bases CTGCGCGCCGAAGGCGCGCTGCCTCCACCGCGCAAGAAGAGCCGCAGGCGCTAGTAGTGATCGTGAGCACGGTTAGGACG GGCGCGGCAGTAGGCAGTCA
Downstream 100 bases:
>100_bases CGAGTCTATAGGCCACAATCACGAGATGGGGCTGTAGATGACGGCAAAAACGGAGGCCAATCGCAAGCCTTTGTTTTATG AGTCCGGCGCCAACTGGATC
Product: delta-aminolevulinic acid dehydratase
Products: NA
Alternate protein names: ALAD; ALADH; Porphobilinogen synthase
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSVSGYPRHRPRRLRSTPAMRRLVAQTSLEPRNLVLPMFVADGIDELRPIASMPGVVQHTRDSLRRAAVAAVDAGVGGLN LFGVPRDQDKDATGSAGVDPDGILNVALRDLAEDLGDATVLMADTCLDEFTDHGHCGVLDGQGRVDNDATVARYVELAVA QAESGANVVGPSGMMDGQIGALRDGLDSAGYADVAILAYAAKFSSAFYGPFREAVSCSLSGDRRTYQQEPGNAREALREI KLDLDEGADIIMIKPASGYLDVVATAAGVSPVPVAAYQVSGEYAMICAAAANNWIDERAAVLESLTSIRRAGADIVFTYW AADVACWLS
Sequences:
>Translated_329_residues MSVSGYPRHRPRRLRSTPAMRRLVAQTSLEPRNLVLPMFVADGIDELRPIASMPGVVQHTRDSLRRAAVAAVDAGVGGLN LFGVPRDQDKDATGSAGVDPDGILNVALRDLAEDLGDATVLMADTCLDEFTDHGHCGVLDGQGRVDNDATVARYVELAVA QAESGANVVGPSGMMDGQIGALRDGLDSAGYADVAILAYAAKFSSAFYGPFREAVSCSLSGDRRTYQQEPGNAREALREI KLDLDEGADIIMIKPASGYLDVVATAAGVSPVPVAAYQVSGEYAMICAAAANNWIDERAAVLESLTSIRRAGADIVFTYW AADVACWLS >Mature_328_residues SVSGYPRHRPRRLRSTPAMRRLVAQTSLEPRNLVLPMFVADGIDELRPIASMPGVVQHTRDSLRRAAVAAVDAGVGGLNL FGVPRDQDKDATGSAGVDPDGILNVALRDLAEDLGDATVLMADTCLDEFTDHGHCGVLDGQGRVDNDATVARYVELAVAQ AESGANVVGPSGMMDGQIGALRDGLDSAGYADVAILAYAAKFSSAFYGPFREAVSCSLSGDRRTYQQEPGNAREALREIK LDLDEGADIIMIKPASGYLDVVATAAGVSPVPVAAYQVSGEYAMICAAAANNWIDERAAVLESLTSIRRAGADIVFTYWA ADVACWLS
Specific function: Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen
COG id: COG0113
COG function: function code H; Delta-aminolevulinic acid dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ALADH family
Homologues:
Organism=Homo sapiens, GI189083849, Length=309, Percent_Identity=40.453074433657, Blast_Score=226, Evalue=3e-59, Organism=Escherichia coli, GI87081728, Length=317, Percent_Identity=46.6876971608833, Blast_Score=279, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6321398, Length=317, Percent_Identity=36.9085173501577, Blast_Score=202, Evalue=8e-53, Organism=Drosophila melanogaster, GI21358291, Length=294, Percent_Identity=39.7959183673469, Blast_Score=210, Evalue=1e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM2_MYCLE (P46723)
Other databases:
- EMBL: U00018 - EMBL: AL583925 - PIR: S72910 - RefSeq: NP_302564.1 - ProteinModelPortal: P46723 - SMR: P46723 - EnsemblBacteria: EBMYCT00000029189 - GeneID: 908581 - GenomeReviews: AL450380_GR - KEGG: mle:ML2419 - NMPDR: fig|272631.1.peg.1436 - Leproma: ML2419 - GeneTree: EBGT00050000016458 - HOGENOM: HBG285270 - OMA: ADLCFCE - ProtClustDB: PRK09283 - BioCyc: MLEP272631:ML2419-MONOMER - BRENDA: 4.2.1.24 - InterPro: IPR001731 - InterPro: IPR013785 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR11458 - PIRSF: PIRSF001415 - PRINTS: PR00144
Pfam domain/function: PF00490 ALAD
EC number: =4.2.1.24
Molecular weight: Translated: 34775; Mature: 34644
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00169 D_ALA_DEHYDRATASE
Important sites: ACT_SITE 202-202 ACT_SITE 254-254 BINDING 212-212 BINDING 223-223 BINDING 280-280 BINDING 319-319
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSGYPRHRPRRLRSTPAMRRLVAQTSLEPRNLVLPMFVADGIDELRPIASMPGVVQHT CCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHHCCHHHHHH RDSLRRAAVAAVDAGVGGLNLFGVPRDQDKDATGSAGVDPDGILNVALRDLAEDLGDATV HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEE LMADTCLDEFTDHGHCGVLDGQGRVDNDATVARYVELAVAQAESGANVVGPSGMMDGQIG EHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHH ALRDGLDSAGYADVAILAYAAKFSSAFYGPFREAVSCSLSGDRRTYQQEPGNAREALREI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHHHH KLDLDEGADIIMIKPASGYLDVVATAAGVSPVPVAAYQVSGEYAMICAAAANNWIDERAA HHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEHHHCCHHHHHHH VLESLTSIRRAGADIVFTYWAADVACWLS HHHHHHHHHHCCCCEEEEEHHHHHHHHCC >Mature Secondary Structure SVSGYPRHRPRRLRSTPAMRRLVAQTSLEPRNLVLPMFVADGIDELRPIASMPGVVQHT CCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHHCCHHHHHH RDSLRRAAVAAVDAGVGGLNLFGVPRDQDKDATGSAGVDPDGILNVALRDLAEDLGDATV HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEE LMADTCLDEFTDHGHCGVLDGQGRVDNDATVARYVELAVAQAESGANVVGPSGMMDGQIG EHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHH ALRDGLDSAGYADVAILAYAAKFSSAFYGPFREAVSCSLSGDRRTYQQEPGNAREALREI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHHHH KLDLDEGADIIMIKPASGYLDVVATAAGVSPVPVAAYQVSGEYAMICAAAANNWIDERAA HHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCEEEEEEHHHCCHHHHHHH VLESLTSIRRAGADIVFTYWAADVACWLS HHHHHHHHHHCCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002