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The map label for this gene is ccdA [H]

Identifier: 221230774

GI number: 221230774

Start: 2882541

End: 2883329

Strand: Reverse

Name: ccdA [H]

Synonym: MLBr_02411

Alternate gene names: 221230774

Gene position: 2883329-2882541 (Counterclockwise)

Preceding gene: 221230775

Following gene: 221230773

Centisome position: 88.23

GC content: 62.36

Gene sequence:

>789_bases
ATGACCGGCTTCACCGAGATTGCCGCAGCGGGACCGCTGTTGGTGGCGCTAGGGGTGTGTATGCTAGCGGGGCTGGTGTC
GTTTGTCTCACCGTGTGTGGTGCCGCTGGTGCCTGGCTACCTCTCGTATCTGGCGGCGGTCGTTGGTGTTTCTCACGAAG
AGACGCAGCCAGGGGCCGGTGTGATCAAAACCCCACCTGCCGCCAGATGGCGGGTGGCAGGATCCGCGGTGCTGTTCGTT
GCTGGGTTCACCACGGTGTTCGTCCTCGACACCGTCGCCGTCCTGGGGATGACCACTGTGCTGACCACCCATCAGGTGCT
GCTGCAGCGGGTCGGAGGTGTGCTGACCATAGTGATGGGGCTGGTGTTCGTGGGTTTGCTCCCTGCCTTGCAGCGCCAGG
TTCAGTTTAGCTTGCGGCAGTTGACGACGGTGGCGGGGGCGCCGGTGCTTGGCACAGTATTTGCGCTCGGCTGGACGCCG
TGCTTAGGGCCGACGTTGAGTGGGGTAATCACGGTTGCTGCGGCCACCGACGGCGTAAATGTGACGCGCGGGATTCTACT
GGTAATTGCCTACTGCATGGGCTTAGGAATCCCGTTCGTGCTGTTAGCGTCCGGTTCTGCGCAGGCGGTGGCCGGCTTGA
GGTGGTTACGGCAATACGGCCGGGCCATCCAAGTCTTTGGCGGCATGCTCCTGATAGCGATCGGTGCGGCACTGATCGCC
GGGGTGTGGGATGACTTTGTTTCGTGGCTGAGGGATGCCGTCGTCAGTGACATGAGGGTGTCGATTTGA

Upstream 100 bases:

>100_bases
CGGCGGTATTTCTGCGGGAATTGCTCGCCGGGGATTTGCAACCTGTGGTGGCTAGGGTGGCGCACGAAACCGTGGCGGGT
CAACTGCCGCGGGGAACGTC

Downstream 100 bases:

>100_bases
TGCAGGTTCTCATGCGGCTTCTGGCCTGGGTGCGCAACACGTGGCGTGCGCTTACCTCGATGGGTACTGCGCTGGTGCTG
TTGTTTTTGCTTGCGCTTGG

Product: putative cytochrome C-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTGFTEIAAAGPLLVALGVCMLAGLVSFVSPCVVPLVPGYLSYLAAVVGVSHEETQPGAGVIKTPPAARWRVAGSAVLFV
AGFTTVFVLDTVAVLGMTTVLTTHQVLLQRVGGVLTIVMGLVFVGLLPALQRQVQFSLRQLTTVAGAPVLGTVFALGWTP
CLGPTLSGVITVAAATDGVNVTRGILLVIAYCMGLGIPFVLLASGSAQAVAGLRWLRQYGRAIQVFGGMLLIAIGAALIA
GVWDDFVSWLRDAVVSDMRVSI

Sequences:

>Translated_262_residues
MTGFTEIAAAGPLLVALGVCMLAGLVSFVSPCVVPLVPGYLSYLAAVVGVSHEETQPGAGVIKTPPAARWRVAGSAVLFV
AGFTTVFVLDTVAVLGMTTVLTTHQVLLQRVGGVLTIVMGLVFVGLLPALQRQVQFSLRQLTTVAGAPVLGTVFALGWTP
CLGPTLSGVITVAAATDGVNVTRGILLVIAYCMGLGIPFVLLASGSAQAVAGLRWLRQYGRAIQVFGGMLLIAIGAALIA
GVWDDFVSWLRDAVVSDMRVSI
>Mature_261_residues
TGFTEIAAAGPLLVALGVCMLAGLVSFVSPCVVPLVPGYLSYLAAVVGVSHEETQPGAGVIKTPPAARWRVAGSAVLFVA
GFTTVFVLDTVAVLGMTTVLTTHQVLLQRVGGVLTIVMGLVFVGLLPALQRQVQFSLRQLTTVAGAPVLGTVFALGWTPC
LGPTLSGVITVAAATDGVNVTRGILLVIAYCMGLGIPFVLLASGSAQAVAGLRWLRQYGRAIQVFGGMLLIAIGAALIAG
VWDDFVSWLRDAVVSDMRVSI

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 27017; Mature: 26885

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGFTEIAAAGPLLVALGVCMLAGLVSFVSPCVVPLVPGYLSYLAAVVGVSHEETQPGAG
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VIKTPPAARWRVAGSAVLFVAGFTTVFVLDTVAVLGMTTVLTTHQVLLQRVGGVLTIVMG
CEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVFVGLLPALQRQVQFSLRQLTTVAGAPVLGTVFALGWTPCLGPTLSGVITVAAATDGVN
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCHHHHHHEEHHHCCCCCH
VTRGILLVIAYCMGLGIPFVLLASGSAQAVAGLRWLRQYGRAIQVFGGMLLIAIGAALIA
HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVWDDFVSWLRDAVVSDMRVSI
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]