| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is csp1 [H]
Identifier: 221229955
GI number: 221229955
Start: 1172959
End: 1175022
Strand: Direct
Name: csp1 [H]
Synonym: MLBr_01002
Alternate gene names: 221229955
Gene position: 1172959-1175022 (Clockwise)
Preceding gene: 221229953
Following gene: 221229957
Centisome position: 35.89
GC content: 58.24
Gene sequence:
>2064_bases GTGAGCAAGCGGGTAAGGAGGGCGCTGGCCAACACGGCGACCACAGCGGTGGTTACTGTGTTGTTGGCGCCTGTTGTGAC TGCATCTCCCACCGGTGACGCCGACGATGCTATTACGGCCGCGTGGCACAAGGCCGGTGGTGACAATTCGGTGCTTGGCG CCAAGAAGGGCGAGGTATATCCTCTTGGTGACGGTTTCGCACAGAACTTTGCGTCCGGTAAACTATTCTTCACTACGGCT ACCGGCGCCAAGTTGCTATATGGGCCAGTACTAGGTAAATACGAGTCACTCGGCGGTCCGGTCAACAGCGATCTGGGATT CCCAATCATCGACGAAGTTCCCGGTCTAGCTGGACCCGACAGCCGAGTTAGTATATTCGCTGCCAGCGACAACCCGGTGA TTTTTTGGACGCCCGACCACGGCGCGTTTGTTGTGCGTGGTGCGCTCAATGCGGCGTGGGACAAACTCGGCAGTTCAGCC GGCGTCCTCGGTGTCCCGGTCGCAGATGAAAGCTTCGACGGTGAGGTTATCTCCCAGAAGTTTAGTGGTGGCGCAGTCTT TTGGAACAAGAAAAGCAGCGAGTTCACCACCGAGCCAACGGCACTAGCCGAGCAGCTAACAGGATTGCTGGTAGCAACCG ATCCCACCACGGCCATCAGCATGGCCTGGCGTGCGGCCGGCGGCGTTTCGGGTCCGCTAGGCCCCAAGCAGGGCGGGCAG CATCCCATCGGTGCTGACGGAATTATTCAGGACTTTGCTGGTGGCAAGGTATTTTTCAGCAAAGCCACCGGTGCTAATGC GGTCGAGAATGACATTCTGGCTAAGTATGAGTCTCTAGGCGGTCCGGTCGGCAGCGACTTGGGTTTCCCCGCCGCCAACG AGGGAGACGGGGGCATCGTTACCTCCAGCCGGATCGCCATTTTCTCCGCAGCCGATAAGCCGGTGATTTTTTGGACACCC GACCACGGCGCGTTTGTCGTGCGCGGAGCGATGAAGGCGGCGTGGGACAAACTCAAAGGTCCCAACGGCAAACTCGGCGT GCCGGTAGCAGACCAATCGGTGGATGGTAATGTGATCTCGCAGAGATTTATCGGTGGCAAGATCTCATGGAACCGCGCTA ATAACACCTTCACTGCCGATCCGGCGAACTTAGCGTCGTTGTTGTCTGGTCTGCAGGTGTCCGAGCAGAGCCAACCGAGT GAGTTGGCGATGCTATTCCACGCCAAGAAATCCACCGGGCATTGGTGGTGGTTGGTGGCTGCGGTTGCTGTGCTGTTAGT GATCGTGATGTTCGTCTTGCTAGCACTCGGGTGGCGTCGGCGTCGCACCGCTCACGATATCGTTGCTGACTCCCATGACC ACGATATGGACGTTGGCATGGACTTTGGCTACAAGGCCGCAGTTGATGGGCAGTGTACCTACGACGCCGAGTCTGGTACC GAGCATCCGGTGCGTGATGTCGAACGCGGACCGACGGTCAGTTGGTTGCGTGGAGCACAGGACGCTACCGGCCTGGCTCA GGATGCTAGGCTTGGCCCGGCGTTCGGCAGCGAATTGCCGTCCGAGTCCGAGGAGCCTTTAGGCCTTGAAGAGGATGATC CCGACGCGGTGGATACGGATTCTATGCCGGCTCTGTCTGATGCTGACTTTCCATATGCTGCTTTGTCGGATGCAGCACAC TGGGATGCCGATGCTGCGGAGGTCGTCGCCACTGACAACAGTAGTGTCGCCACTGACAACAGTAGTTTGTTGGAAACTGC TGCTGACACTGAGGTAAGCACGGGTCGACACGCAGCCGTTGATATGGCAGATGCGATGGATGCGTCCTTCCCGGGCGTCA CTGTGCCGAGGATGCTGTTCCGGCCAAGCCCGACTCTCCGGCCGACGATCCACCTGCCGTTGGATGACCCTTATCAGGTA CCCGACGGTTATCCTATTAAAGCTAGTCCGCGCTTCGGTCTGTACTATACCCCGGCGAGCGAATTATACCATGACACGCT CGCTGAAGTCTGGCTAGCCAATGAAGAAATCGCCCAGGTCAACGGCTTTATTAAGGCCGACTGA
Upstream 100 bases:
>100_bases TACTGGGTGAACCCGCTCGTTGGGCAGGGTACGGGCATGACCACAGGATCGGGCATGTCCTTTAGCTGGAAGACACTTAG TGAACGAGCAGAGAGGTCGA
Downstream 100 bases:
>100_bases CGATGGTCCGGTCGACTACGCACAAGACTTTTCGGGGGTTATATCTTGCGGATTACTGTCACGACTTTGCCAAGCACCGT TGCATCGTTGCCGGGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MSKRVRRALANTATTAVVTVLLAPVVTASPTGDADDAITAAWHKAGGDNSVLGAKKGEVYPLGDGFAQNFASGKLFFTTA TGAKLLYGPVLGKYESLGGPVNSDLGFPIIDEVPGLAGPDSRVSIFAASDNPVIFWTPDHGAFVVRGALNAAWDKLGSSA GVLGVPVADESFDGEVISQKFSGGAVFWNKKSSEFTTEPTALAEQLTGLLVATDPTTAISMAWRAAGGVSGPLGPKQGGQ HPIGADGIIQDFAGGKVFFSKATGANAVENDILAKYESLGGPVGSDLGFPAANEGDGGIVTSSRIAIFSAADKPVIFWTP DHGAFVVRGAMKAAWDKLKGPNGKLGVPVADQSVDGNVISQRFIGGKISWNRANNTFTADPANLASLLSGLQVSEQSQPS ELAMLFHAKKSTGHWWWLVAAVAVLLVIVMFVLLALGWRRRRTAHDIVADSHDHDMDVGMDFGYKAAVDGQCTYDAESGT EHPVRDVERGPTVSWLRGAQDATGLAQDARLGPAFGSELPSESEEPLGLEEDDPDAVDTDSMPALSDADFPYAALSDAAH WDADAAEVVATDNSSVATDNSSLLETAADTEVSTGRHAAVDMADAMDASFPGVTVPRMLFRPSPTLRPTIHLPLDDPYQV PDGYPIKASPRFGLYYTPASELYHDTLAEVWLANEEIAQVNGFIKAD
Sequences:
>Translated_687_residues MSKRVRRALANTATTAVVTVLLAPVVTASPTGDADDAITAAWHKAGGDNSVLGAKKGEVYPLGDGFAQNFASGKLFFTTA TGAKLLYGPVLGKYESLGGPVNSDLGFPIIDEVPGLAGPDSRVSIFAASDNPVIFWTPDHGAFVVRGALNAAWDKLGSSA GVLGVPVADESFDGEVISQKFSGGAVFWNKKSSEFTTEPTALAEQLTGLLVATDPTTAISMAWRAAGGVSGPLGPKQGGQ HPIGADGIIQDFAGGKVFFSKATGANAVENDILAKYESLGGPVGSDLGFPAANEGDGGIVTSSRIAIFSAADKPVIFWTP DHGAFVVRGAMKAAWDKLKGPNGKLGVPVADQSVDGNVISQRFIGGKISWNRANNTFTADPANLASLLSGLQVSEQSQPS ELAMLFHAKKSTGHWWWLVAAVAVLLVIVMFVLLALGWRRRRTAHDIVADSHDHDMDVGMDFGYKAAVDGQCTYDAESGT EHPVRDVERGPTVSWLRGAQDATGLAQDARLGPAFGSELPSESEEPLGLEEDDPDAVDTDSMPALSDADFPYAALSDAAH WDADAAEVVATDNSSVATDNSSLLETAADTEVSTGRHAAVDMADAMDASFPGVTVPRMLFRPSPTLRPTIHLPLDDPYQV PDGYPIKASPRFGLYYTPASELYHDTLAEVWLANEEIAQVNGFIKAD >Mature_686_residues SKRVRRALANTATTAVVTVLLAPVVTASPTGDADDAITAAWHKAGGDNSVLGAKKGEVYPLGDGFAQNFASGKLFFTTAT GAKLLYGPVLGKYESLGGPVNSDLGFPIIDEVPGLAGPDSRVSIFAASDNPVIFWTPDHGAFVVRGALNAAWDKLGSSAG VLGVPVADESFDGEVISQKFSGGAVFWNKKSSEFTTEPTALAEQLTGLLVATDPTTAISMAWRAAGGVSGPLGPKQGGQH PIGADGIIQDFAGGKVFFSKATGANAVENDILAKYESLGGPVGSDLGFPAANEGDGGIVTSSRIAIFSAADKPVIFWTPD HGAFVVRGAMKAAWDKLKGPNGKLGVPVADQSVDGNVISQRFIGGKISWNRANNTFTADPANLASLLSGLQVSEQSQPSE LAMLFHAKKSTGHWWWLVAAVAVLLVIVMFVLLALGWRRRRTAHDIVADSHDHDMDVGMDFGYKAAVDGQCTYDAESGTE HPVRDVERGPTVSWLRGAQDATGLAQDARLGPAFGSELPSESEEPLGLEEDDPDAVDTDSMPALSDADFPYAALSDAAHW DADAAEVVATDNSSVATDNSSLLETAADTEVSTGRHAAVDMADAMDASFPGVTVPRMLFRPSPTLRPTIHLPLDDPYQVP DGYPIKASPRFGLYYTPASELYHDTLAEVWLANEEIAQVNGFIKAD
Specific function: One of the two major secreted proteins [H]
COG id: COG5479
COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR013207 [H]
Pfam domain/function: PF00756 Esterase; PF08310 LGFP [H]
EC number: NA
Molecular weight: Translated: 72082; Mature: 71951
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00116 DNA_POLYMERASE_B
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRVRRALANTATTAVVTVLLAPVVTASPTGDADDAITAAWHKAGGDNSVLGAKKGEVY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCEE PLGDGFAQNFASGKLFFTTATGAKLLYGPVLGKYESLGGPVNSDLGFPIIDEVPGLAGPD ECCCHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC SRVSIFAASDNPVIFWTPDHGAFVVRGALNAAWDKLGSSAGVLGVPVADESFDGEVISQK CCEEEEEECCCCEEEEECCCCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHH FSGGAVFWNKKSSEFTTEPTALAEQLTGLLVATDPTTAISMAWRAAGGVSGPLGPKQGGQ CCCCEEEECCCCCCCCCCHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC HPIGADGIIQDFAGGKVFFSKATGANAVENDILAKYESLGGPVGSDLGFPAANEGDGGIV CCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE TSSRIAIFSAADKPVIFWTPDHGAFVVRGAMKAAWDKLKGPNGKLGVPVADQSVDGNVIS ECCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH QRFIGGKISWNRANNTFTADPANLASLLSGLQVSEQSQPSELAMLFHAKKSTGHWWWLVA HHHCCCEEEECCCCCCEECCHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCHHHHHH AVAVLLVIVMFVLLALGWRRRRTAHDIVADSHDHDMDVGMDFGYKAAVDGQCTYDAESGT HHHHHHHHHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCCCC EHPVRDVERGPTVSWLRGAQDATGLAQDARLGPAFGSELPSESEEPLGLEEDDPDAVDTD CCCHHHHHCCCCHHHHHCCCHHCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC SMPALSDADFPYAALSDAAHWDADAAEVVATDNSSVATDNSSLLETAADTEVSTGRHAAV CCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCEECCCHHHHHHHCCCCCCCCCCHHH DMADAMDASFPGVTVPRMLFRPSPTLRPTIHLPLDDPYQVPDGYPIKASPRFGLYYTPAS HHHHHHCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCHH ELYHDTLAEVWLANEEIAQVNGFIKAD HHHHHHHHHHHHCCCHHHHHCCEEECC >Mature Secondary Structure SKRVRRALANTATTAVVTVLLAPVVTASPTGDADDAITAAWHKAGGDNSVLGAKKGEVY CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCEE PLGDGFAQNFASGKLFFTTATGAKLLYGPVLGKYESLGGPVNSDLGFPIIDEVPGLAGPD ECCCHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC SRVSIFAASDNPVIFWTPDHGAFVVRGALNAAWDKLGSSAGVLGVPVADESFDGEVISQK CCEEEEEECCCCEEEEECCCCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHH FSGGAVFWNKKSSEFTTEPTALAEQLTGLLVATDPTTAISMAWRAAGGVSGPLGPKQGGQ CCCCEEEECCCCCCCCCCHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC HPIGADGIIQDFAGGKVFFSKATGANAVENDILAKYESLGGPVGSDLGFPAANEGDGGIV CCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE TSSRIAIFSAADKPVIFWTPDHGAFVVRGAMKAAWDKLKGPNGKLGVPVADQSVDGNVIS ECCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH QRFIGGKISWNRANNTFTADPANLASLLSGLQVSEQSQPSELAMLFHAKKSTGHWWWLVA HHHCCCEEEECCCCCCEECCHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCHHHHHH AVAVLLVIVMFVLLALGWRRRRTAHDIVADSHDHDMDVGMDFGYKAAVDGQCTYDAESGT HHHHHHHHHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCCCC EHPVRDVERGPTVSWLRGAQDATGLAQDARLGPAFGSELPSESEEPLGLEEDDPDAVDTD CCCHHHHHCCCCHHHHHCCCHHCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC SMPALSDADFPYAALSDAAHWDADAAEVVATDNSSVATDNSSLLETAADTEVSTGRHAAV CCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCEECCCHHHHHHHCCCCCCCCCCHHH DMADAMDASFPGVTVPRMLFRPSPTLRPTIHLPLDDPYQVPDGYPIKASPRFGLYYTPAS HHHHHHCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCHH ELYHDTLAEVWLANEEIAQVNGFIKAD HHHHHHHHHHHHCCCHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]