| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is hflX [H]
Identifier: 221229953
GI number: 221229953
Start: 1165310
End: 1166776
Strand: Direct
Name: hflX [H]
Synonym: MLBr_00997
Alternate gene names: 221229953
Gene position: 1165310-1166776 (Clockwise)
Preceding gene: 221229952
Following gene: 221229955
Centisome position: 35.66
GC content: 61.76
Gene sequence:
>1467_bases ATGAAATATCCAGATTCGTCCGATAGGGGCTCTGCAGACTTTCCGGATCTCTGGGACTCGTCAGACTCGGTGCCTAGCAC CGGTGAGCTTGCCCTTCATGACCGATTGGCGCTGCGCCGGATTGCCGGGCTGTCCACCGAACTCGCTGATGTTTCCGAGG TCGAGTACCGCCAACTGCGGCTGGAACGGGTGGTGTTGGTTGGTGTGTGGACCGAGGGCAGCGCGGCCGACAATCAGGCC AGCATGGCCGAACTTGCGACCCTGGCCGAAACCGCCGGTTCGCAGGTTCTCGAAGGTCTCATCCAACGTCGCGATCGGCC CGATCCGTCGACCTACATCGGTTCTGGCAAGGCGGCTGAATTGCGTGAGGTGGTGCTGGCCACCGGCGCCGACACCGTCA TCTGCGACGGTGAACTGTCCCCTGCGCAGTTGACCGCGCTGGAGAAGGCGGTCAAGGTGAAGGTCATCGACCGCACCGCG CTGATCCTTGACATTTTTGCTCAGCACGCGACCAGCCGGGAAGGCAAAGCCCAGGTGTTGTTGGCTCAGATGGCTTATAT GCTACCGCGGCTACGCGGCTGGGGTGAGTCGATGTCACGTCAGGTTGGTGGTCGAGCCGGTGGCAGTGGCGGAGGAGTGG GCTTGCGAGGTCCCGGTGAGACCAAAATTGAGACCGACCGACGTAGAATCCGGGAACGGATGGCCAAGCTGCGTCGGGAT ATCGGCGCTATGAAGCAGGCCCGCGACACCCAGCGCAGCCGCCGGTTGCACAGCGACATTCCGTCGATCGCTATCGTCGG CTATACCAATGCCGGCAAGTCCAGTGTGCTGAATGCGCTGACCGGGGCGTGGGTGCTAGTGCAGGACGCGTTGTTCGTCA CCCTAGAACCCACCACCCGGCACGCAGAATTCGATAACGGTCAGCCGTTCGTGTTCACCGACACCGTGGGGTTCGTTCGC CATCTGCCTACTCAGCTGGTCGAAGCATTCCGTTCCACACTGGAGGAGGTCGTTGACGCCGACCTGTTATTGCATGTCGT CGACGGCTCAGATGCCAACCCGTTGGCTCAGATCAATGCTGTCCGTCAGGTGATCTTTGAGGTTATTTCCGATCACCAGG ACGGTGGCGTGGAGGTGCCGCATGAGCTGTTGGTGGTCAACAAGATCGACGCCGCAAGCGCTCTGATGTTGGCCAAGCTT CGTCACGGGTTGCCAGGCGCCGTGTTCATCTCCGCTCGCACCGGGGACGGTATCGACGTGTTGCGGCGACGGATAGCCGA GCTCGTTGTGGCCACCGACACCGCTGTAGACGTGGTGATCCCGTACGACCGTGGTGATCTGGTGGCTCGCCTGCACGCTA ACGGGCGCGTTCAGCAGGCAGAGCACAATTCGAACGGCACCCGGATCAAGGCCCGGGTTCCCGTGGCGTTGGCCGCCTGC TTACAGGAGTTTTCGGCCGACCGATAG
Upstream 100 bases:
>100_bases CGGACGCCTGGTGGTACTCGTTGGCGCGCAGCTGTTAAATGTTGCGGGAATTTATTCGGATGCGCGCCCAGCTACGAAGT GCCACCATCGGATACTGGCT
Downstream 100 bases:
>100_bases CTGTTGCCGGTCAGATGTCACCGGGTTCTTCATCCCCGCCGGTACGCGACGCATCGCTTGGTTAGCCAGTTGGTGGGTCG GGCGGCAAGTTGTTGACCAA
Product: putative ATP/GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKYPDSSDRGSADFPDLWDSSDSVPSTGELALHDRLALRRIAGLSTELADVSEVEYRQLRLERVVLVGVWTEGSAADNQA SMAELATLAETAGSQVLEGLIQRRDRPDPSTYIGSGKAAELREVVLATGADTVICDGELSPAQLTALEKAVKVKVIDRTA LILDIFAQHATSREGKAQVLLAQMAYMLPRLRGWGESMSRQVGGRAGGSGGGVGLRGPGETKIETDRRRIRERMAKLRRD IGAMKQARDTQRSRRLHSDIPSIAIVGYTNAGKSSVLNALTGAWVLVQDALFVTLEPTTRHAEFDNGQPFVFTDTVGFVR HLPTQLVEAFRSTLEEVVDADLLLHVVDGSDANPLAQINAVRQVIFEVISDHQDGGVEVPHELLVVNKIDAASALMLAKL RHGLPGAVFISARTGDGIDVLRRRIAELVVATDTAVDVVIPYDRGDLVARLHANGRVQQAEHNSNGTRIKARVPVALAAC LQEFSADR
Sequences:
>Translated_488_residues MKYPDSSDRGSADFPDLWDSSDSVPSTGELALHDRLALRRIAGLSTELADVSEVEYRQLRLERVVLVGVWTEGSAADNQA SMAELATLAETAGSQVLEGLIQRRDRPDPSTYIGSGKAAELREVVLATGADTVICDGELSPAQLTALEKAVKVKVIDRTA LILDIFAQHATSREGKAQVLLAQMAYMLPRLRGWGESMSRQVGGRAGGSGGGVGLRGPGETKIETDRRRIRERMAKLRRD IGAMKQARDTQRSRRLHSDIPSIAIVGYTNAGKSSVLNALTGAWVLVQDALFVTLEPTTRHAEFDNGQPFVFTDTVGFVR HLPTQLVEAFRSTLEEVVDADLLLHVVDGSDANPLAQINAVRQVIFEVISDHQDGGVEVPHELLVVNKIDAASALMLAKL RHGLPGAVFISARTGDGIDVLRRRIAELVVATDTAVDVVIPYDRGDLVARLHANGRVQQAEHNSNGTRIKARVPVALAAC LQEFSADR >Mature_488_residues MKYPDSSDRGSADFPDLWDSSDSVPSTGELALHDRLALRRIAGLSTELADVSEVEYRQLRLERVVLVGVWTEGSAADNQA SMAELATLAETAGSQVLEGLIQRRDRPDPSTYIGSGKAAELREVVLATGADTVICDGELSPAQLTALEKAVKVKVIDRTA LILDIFAQHATSREGKAQVLLAQMAYMLPRLRGWGESMSRQVGGRAGGSGGGVGLRGPGETKIETDRRRIRERMAKLRRD IGAMKQARDTQRSRRLHSDIPSIAIVGYTNAGKSSVLNALTGAWVLVQDALFVTLEPTTRHAEFDNGQPFVFTDTVGFVR HLPTQLVEAFRSTLEEVVDADLLLHVVDGSDANPLAQINAVRQVIFEVISDHQDGGVEVPHELLVVNKIDAASALMLAKL RHGLPGAVFISARTGDGIDVLRRRIAELVVATDTAVDVVIPYDRGDLVARLHANGRVQQAEHNSNGTRIKARVPVALAAC LQEFSADR
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=212, Percent_Identity=33.4905660377358, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI310124267, Length=212, Percent_Identity=33.4905660377358, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI310124171, Length=212, Percent_Identity=33.4905660377358, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI310124169, Length=212, Percent_Identity=33.4905660377358, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI310133118, Length=220, Percent_Identity=33.6363636363636, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI310133116, Length=220, Percent_Identity=33.6363636363636, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1790615, Length=418, Percent_Identity=38.755980861244, Blast_Score=263, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17561038, Length=297, Percent_Identity=32.6599326599327, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24650079, Length=301, Percent_Identity=32.2259136212625, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 52802; Mature: 52802
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYPDSSDRGSADFPDLWDSSDSVPSTGELALHDRLALRRIAGLSTELADVSEVEYRQLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LERVVLVGVWTEGSAADNQASMAELATLAETAGSQVLEGLIQRRDRPDPSTYIGSGKAAE HEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH LREVVLATGADTVICDGELSPAQLTALEKAVKVKVIDRTALILDIFAQHATSREGKAQVL HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCCHHHHH LAQMAYMLPRLRGWGESMSRQVGGRAGGSGGGVGLRGPGETKIETDRRRIRERMAKLRRD HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IGAMKQARDTQRSRRLHSDIPSIAIVGYTNAGKSSVLNALTGAWVLVQDALFVTLEPTTR HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHEEECEEEEEECCCCC HAEFDNGQPFVFTDTVGFVRHLPTQLVEAFRSTLEEVVDADLLLHVVDGSDANPLAQINA CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCHHHHHHH VRQVIFEVISDHQDGGVEVPHELLVVNKIDAASALMLAKLRHGLPGAVFISARTGDGIDV HHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHH LRRRIAELVVATDTAVDVVIPYDRGDLVARLHANGRVQQAEHNSNGTRIKARVPVALAAC HHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCEEEEECCHHHHHH LQEFSADR HHHHCCCC >Mature Secondary Structure MKYPDSSDRGSADFPDLWDSSDSVPSTGELALHDRLALRRIAGLSTELADVSEVEYRQLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LERVVLVGVWTEGSAADNQASMAELATLAETAGSQVLEGLIQRRDRPDPSTYIGSGKAAE HEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH LREVVLATGADTVICDGELSPAQLTALEKAVKVKVIDRTALILDIFAQHATSREGKAQVL HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCCHHHHH LAQMAYMLPRLRGWGESMSRQVGGRAGGSGGGVGLRGPGETKIETDRRRIRERMAKLRRD HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH IGAMKQARDTQRSRRLHSDIPSIAIVGYTNAGKSSVLNALTGAWVLVQDALFVTLEPTTR HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHEEECEEEEEECCCCC HAEFDNGQPFVFTDTVGFVRHLPTQLVEAFRSTLEEVVDADLLLHVVDGSDANPLAQINA CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCHHHHHHH VRQVIFEVISDHQDGGVEVPHELLVVNKIDAASALMLAKLRHGLPGAVFISARTGDGIDV HHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHH LRRRIAELVVATDTAVDVVIPYDRGDLVARLHANGRVQQAEHNSNGTRIKARVPVALAAC HHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCEEEEECCHHHHHH LQEFSADR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]