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The map label for this gene is ydbC [H]

Identifier: 221229626

GI number: 221229626

Start: 558372

End: 559277

Strand: Reverse

Name: ydbC [H]

Synonym: MLBr_00458

Alternate gene names: 221229626

Gene position: 559277-558372 (Counterclockwise)

Preceding gene: 221229630

Following gene: 221229625

Centisome position: 17.11

GC content: 61.81

Gene sequence:

>906_bases
ATGCGTCGTTTTTGGCGTACGGTCGTGGAAGTGACATCACAAAACTCTCAGGCTCTGGCCCAGGCATCCGGAGCGTTCAC
GCTCGGTGGCGACCTGAAGGTCAACCGACTTGGTTTCGGCGCGATGCGCCTAACGGGTAAGGGAGTGTGGGGCCCGCCCG
TTGACCGCTACGAGGCCGTGCGGGTACTGCGACGCGCCGTCGAATTGGGGGTGAACTTCATCGATACCGCCGACTCCTAC
GGCCCCTACGTCTCCGAGGAGATAATTGCCGAGGCGTTGCATCCCTACAAGGGACTGGTGATCGCAACCAAGGCCGGTTT
GTTGCGGACAGGCCGGGACGTATGGATCCCGCTGGGTAATCCAAGCTACCTGCGCCAAGAACTGGAAATGAGCCTGCGCC
GTCTCAACGTCGACACCATCGATCTGTTTCAACTGCACCGGATCGACCCGAACTTCCCACTGGCCGACCAAGTGGGCGAG
CTGTTCACATTGAAAAACGAAGGCAAGATCCGCCATATCGGTCTGTCCGAGATCAACCTCGATCAACTCACCGCGGCCCA
GCAGATCACAGAGATCGTGTCGGTGCAGAACATGTACAACTTGTCGGCGCGAGCTGCCGAACCACTGTTAGATGCCGTGA
CCAGTCGGGGCATCGGCTTCATCCCGTGGTCCCCACTGGCCGCGGGACCGTTGGCGGCCCCGGACGGACCGCTGCAGCGC
ATCGCCGTCAACCATCACGCGACGCCGTCGCAACTGGCGCTGGCCTGGTTGCTAAAGCGATCGCCGGTGATGTTGCCGAT
TCCAGGGACATCGCGGGTGGCGCACCTGGAGGAGAACGTCGCCGCCGCCGAGATCAGCCTTTCCGACGACGAGTTCGAGA
TGCTCTCGGCTGCTGGGGCCCAGTGA

Upstream 100 bases:

>100_bases
TGGCAGCTGGCCGGCTACGGTCGCGCGCACCTCCTGGTAGGTCAGTCGGCATTACTTCAAGCGCATAAATATACACTTGT
TTAGCTTGCTATGCTTAAAA

Downstream 100 bases:

>100_bases
CCGAGCCGGTGGTTTACACCTCTCGGTAGGCAATTCGGTGTCGTGGTGGCCAGCAAGTCGGGTCGCTGGATGGACCTACC
TGTCCGCAACAAACATCCTG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRRFWRTVVEVTSQNSQALAQASGAFTLGGDLKVNRLGFGAMRLTGKGVWGPPVDRYEAVRVLRRAVELGVNFIDTADSY
GPYVSEEIIAEALHPYKGLVIATKAGLLRTGRDVWIPLGNPSYLRQELEMSLRRLNVDTIDLFQLHRIDPNFPLADQVGE
LFTLKNEGKIRHIGLSEINLDQLTAAQQITEIVSVQNMYNLSARAAEPLLDAVTSRGIGFIPWSPLAAGPLAAPDGPLQR
IAVNHHATPSQLALAWLLKRSPVMLPIPGTSRVAHLEENVAAAEISLSDDEFEMLSAAGAQ

Sequences:

>Translated_301_residues
MRRFWRTVVEVTSQNSQALAQASGAFTLGGDLKVNRLGFGAMRLTGKGVWGPPVDRYEAVRVLRRAVELGVNFIDTADSY
GPYVSEEIIAEALHPYKGLVIATKAGLLRTGRDVWIPLGNPSYLRQELEMSLRRLNVDTIDLFQLHRIDPNFPLADQVGE
LFTLKNEGKIRHIGLSEINLDQLTAAQQITEIVSVQNMYNLSARAAEPLLDAVTSRGIGFIPWSPLAAGPLAAPDGPLQR
IAVNHHATPSQLALAWLLKRSPVMLPIPGTSRVAHLEENVAAAEISLSDDEFEMLSAAGAQ
>Mature_301_residues
MRRFWRTVVEVTSQNSQALAQASGAFTLGGDLKVNRLGFGAMRLTGKGVWGPPVDRYEAVRVLRRAVELGVNFIDTADSY
GPYVSEEIIAEALHPYKGLVIATKAGLLRTGRDVWIPLGNPSYLRQELEMSLRRLNVDTIDLFQLHRIDPNFPLADQVGE
LFTLKNEGKIRHIGLSEINLDQLTAAQQITEIVSVQNMYNLSARAAEPLLDAVTSRGIGFIPWSPLAAGPLAAPDGPLQR
IAVNHHATPSQLALAWLLKRSPVMLPIPGTSRVAHLEENVAAAEISLSDDEFEMLSAAGAQ

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=282, Percent_Identity=44.3262411347518, Blast_Score=220, Evalue=9e-59,
Organism=Escherichia coli, GI87081735, Length=308, Percent_Identity=33.7662337662338, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1788070, Length=309, Percent_Identity=31.0679611650485, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1788081, Length=267, Percent_Identity=31.4606741573034, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789375, Length=312, Percent_Identity=28.525641025641, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI48994888, Length=262, Percent_Identity=27.8625954198473, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786400, Length=268, Percent_Identity=27.9850746268657, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87082198, Length=256, Percent_Identity=28.515625, Blast_Score=64, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24646155, Length=291, Percent_Identity=27.1477663230241, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32875; Mature: 32875

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFWRTVVEVTSQNSQALAQASGAFTLGGDLKVNRLGFGAMRLTGKGVWGPPVDRYEAV
CCHHHHHHHHHHCCCHHHHHHCCCCEEECCCEEEEEECCCEEEEECCCCCCCCCHHHHHH
RVLRRAVELGVNFIDTADSYGPYVSEEIIAEALHPYKGLVIATKAGLLRTGRDVWIPLGN
HHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHCCCCEEEEECCC
PSYLRQELEMSLRRLNVDTIDLFQLHRIDPNFPLADQVGELFTLKNEGKIRHIGLSEINL
HHHHHHHHHHHHHHCCCCEEEHHEEEECCCCCCCHHHHHHEEEECCCCCEEEECCCCCCH
DQLTAAQQITEIVSVQNMYNLSARAAEPLLDAVTSRGIGFIPWSPLAAGPLAAPDGPLQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
IAVNHHATPSQLALAWLLKRSPVMLPIPGTSRVAHLEENVAAAEISLSDDEFEMLSAAGA
EEECCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCEEEEEECCCCHHHHHHHCCC
Q
C
>Mature Secondary Structure
MRRFWRTVVEVTSQNSQALAQASGAFTLGGDLKVNRLGFGAMRLTGKGVWGPPVDRYEAV
CCHHHHHHHHHHCCCHHHHHHCCCCEEECCCEEEEEECCCEEEEECCCCCCCCCHHHHHH
RVLRRAVELGVNFIDTADSYGPYVSEEIIAEALHPYKGLVIATKAGLLRTGRDVWIPLGN
HHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHCCCCEEEEECCC
PSYLRQELEMSLRRLNVDTIDLFQLHRIDPNFPLADQVGELFTLKNEGKIRHIGLSEINL
HHHHHHHHHHHHHHCCCCEEEHHEEEECCCCCCCHHHHHHEEEECCCCCEEEECCCCCCH
DQLTAAQQITEIVSVQNMYNLSARAAEPLLDAVTSRGIGFIPWSPLAAGPLAAPDGPLQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
IAVNHHATPSQLALAWLLKRSPVMLPIPGTSRVAHLEENVAAAEISLSDDEFEMLSAAGA
EEECCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCEEEEEECCCCHHHHHHHCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]