| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918765
Identifier: 220918765
GI number: 220918765
Start: 4094363
End: 4095415
Strand: Direct
Name: 220918765
Synonym: A2cp1_3676
Alternate gene names: NA
Gene position: 4094363-4095415 (Clockwise)
Preceding gene: 220918764
Following gene: 220918766
Centisome position: 81.41
GC content: 79.49
Gene sequence:
>1053_bases TTGGCGTTCGCCGGAGCTTTTGAGCCGGTGGTCCGGGCCGCCTGGGCGACCGGGCTGCTCACCGTGCTGCTGAGCGCCGT GCTCGTCGCGCGCGTGCTCGGCATGCGCCGGCGGCTGGCGCGGGCGGAGGCAAGGCGCCAGGACGTGGTCGCGCGCTGGC GGCCGGTCCTGTTCGAGGCGATCGCCGGCGGCAGCCCGCGCCTGCCCGCCCTGCCGCCCGAGGACGAGGACGCGTTCCTG CTGCTCTGGGTCCAGCTCCTCGACGGCATCCGCGGCGAGCCCCTCGAGCGGCTGGCCCGGGTCGGCGACGCGCTCGGCGC GCGGGCGCTCGCCGGCGCCCGGCTGCGCCGCGAGGACGCGCTCGGGCACGTGCTGGCGCTGCGGACGCTCGGCTATCTCG GGCGCGCGGAGGATCGCGCCGAGGTGCTGCGCTGGCTCGACGACCCGCGCTCCTACCTGTCCCTCGCGGCGGCCCGCGCG CTGGTGCGGATCGATCCCGAGGGCGCGCCGGCCGAGCTGCTGCCGCGGCTGGCCCGGCGGGCCGACTGGCCGGTGCCGCT GTTCGCGAGCGTCCTCGGGGAGGCGAGCCCGCCGCGCGTGTCGGAGCGCTTCGCCGCGCTCTGCGCCGCCCTGCCCGGTC CCGCGCTGGTGCGCCTGCTCCCGCTCGCGTCCATCGTGGACGCGCACCGGGTGGAGCCGATCCTGGCCGCGCTGCTCGAG CGCGCCGACGAGCCCGAGGTCCTTGCCGCGGCGCTGCGCCAGGTGCGGAGCCCGGCGCTCCTCGACGCCGCCCGCCGCGC CGCGCGGCACGCGTCGTGGTCGGTCCGGGTGCAGGCGGCCGCCGCGCTCGGGCGCGTGGGCGAGCGGGCCGATCGCGAGC TGCTGGCCGGCCTCCTGCGGGACGCGGAGTGGTGGGTCCGCTACCGCGCCGCGCAGGCGCTCGCCGCCCGGCCGTACGGC ACCTCGCAGGAGGTGCTCGCGCTGGCCGAGGCGTCCGGCGACCGCTACGCGCGCGACATCGTCCGGCAGGCGCTCGCGGA GGTGCGGTCGTGA
Upstream 100 bases:
>100_bases GCGCTCACCGGTGCCCATCCGCTCTCGGCCACGTGGGCGGTCACCTGGGACCTGACCGCGCAGCGGCAGGGGGACCTCTA CACTCGGGTGGGAGGGCGCC
Downstream 100 bases:
>100_bases CGCTGCTCCGGCTCATCGAGGTCGTGCAGTGGGCGTTCCTCGCCTACTTCGTCGCGCTCACCGTGTCGTACCTCGCGCTC AACCTCGTCTCGCTGCGGGT
Product: PBS lyase HEAT domain-containing protein repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MAFAGAFEPVVRAAWATGLLTVLLSAVLVARVLGMRRRLARAEARRQDVVARWRPVLFEAIAGGSPRLPALPPEDEDAFL LLWVQLLDGIRGEPLERLARVGDALGARALAGARLRREDALGHVLALRTLGYLGRAEDRAEVLRWLDDPRSYLSLAAARA LVRIDPEGAPAELLPRLARRADWPVPLFASVLGEASPPRVSERFAALCAALPGPALVRLLPLASIVDAHRVEPILAALLE RADEPEVLAAALRQVRSPALLDAARRAARHASWSVRVQAAAALGRVGERADRELLAGLLRDAEWWVRYRAAQALAARPYG TSQEVLALAEASGDRYARDIVRQALAEVRS
Sequences:
>Translated_350_residues MAFAGAFEPVVRAAWATGLLTVLLSAVLVARVLGMRRRLARAEARRQDVVARWRPVLFEAIAGGSPRLPALPPEDEDAFL LLWVQLLDGIRGEPLERLARVGDALGARALAGARLRREDALGHVLALRTLGYLGRAEDRAEVLRWLDDPRSYLSLAAARA LVRIDPEGAPAELLPRLARRADWPVPLFASVLGEASPPRVSERFAALCAALPGPALVRLLPLASIVDAHRVEPILAALLE RADEPEVLAAALRQVRSPALLDAARRAARHASWSVRVQAAAALGRVGERADRELLAGLLRDAEWWVRYRAAQALAARPYG TSQEVLALAEASGDRYARDIVRQALAEVRS >Mature_349_residues AFAGAFEPVVRAAWATGLLTVLLSAVLVARVLGMRRRLARAEARRQDVVARWRPVLFEAIAGGSPRLPALPPEDEDAFLL LWVQLLDGIRGEPLERLARVGDALGARALAGARLRREDALGHVLALRTLGYLGRAEDRAEVLRWLDDPRSYLSLAAARAL VRIDPEGAPAELLPRLARRADWPVPLFASVLGEASPPRVSERFAALCAALPGPALVRLLPLASIVDAHRVEPILAALLER ADEPEVLAAALRQVRSPALLDAARRAARHASWSVRVQAAAALGRVGERADRELLAGLLRDAEWWVRYRAAQALAARPYGT SQEVLALAEASGDRYARDIVRQALAEVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38011; Mature: 37880
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAGAFEPVVRAAWATGLLTVLLSAVLVARVLGMRRRLARAEARRQDVVARWRPVLFEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGGSPRLPALPPEDEDAFLLLWVQLLDGIRGEPLERLARVGDALGARALAGARLRREDA HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGHVLALRTLGYLGRAEDRAEVLRWLDDPRSYLSLAAARALVRIDPEGAPAELLPRLARR HHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH ADWPVPLFASVLGEASPPRVSERFAALCAALPGPALVRLLPLASIVDAHRVEPILAALLE CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RADEPEVLAAALRQVRSPALLDAARRAARHASWSVRVQAAAALGRVGERADRELLAGLLR CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAEWWVRYRAAQALAARPYGTSQEVLALAEASGDRYARDIVRQALAEVRS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AFAGAFEPVVRAAWATGLLTVLLSAVLVARVLGMRRRLARAEARRQDVVARWRPVLFEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGGSPRLPALPPEDEDAFLLLWVQLLDGIRGEPLERLARVGDALGARALAGARLRREDA HCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGHVLALRTLGYLGRAEDRAEVLRWLDDPRSYLSLAAARALVRIDPEGAPAELLPRLARR HHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH ADWPVPLFASVLGEASPPRVSERFAALCAALPGPALVRLLPLASIVDAHRVEPILAALLE CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RADEPEVLAAALRQVRSPALLDAARRAARHASWSVRVQAAAALGRVGERADRELLAGLLR CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAEWWVRYRAAQALAARPYGTSQEVLALAEASGDRYARDIVRQALAEVRS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA