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The map label for this gene is uhpA [C]

Identifier: 220918688

GI number: 220918688

Start: 4016045

End: 4016581

Strand: Direct

Name: uhpA [C]

Synonym: A2cp1_3596

Alternate gene names: 220918688

Gene position: 4016045-4016581 (Clockwise)

Preceding gene: 220918687

Following gene: 220918689

Centisome position: 79.85

GC content: 74.67

Gene sequence:

>537_bases
GTGCTGGCCATGATGCGAGCGAACGTTCGCGTTCCCGCTCCGCGCGGGGCTGCCGCTCACAGCGACGCGGGTGGGCTGCT
GCGCGCCGACCGGCAGGCGGAGGAGATGCTGAAGGTGTTCTTCGCGGACGCCGCCGACGGCGCGCTGGTGCCGGCGGAGC
TCCGCGGCCTCACCGACGGGGCCCAGAACGGGCCGCCCGGCGTGCGCCGCACGCTGGTGATGGAGGGCCACGGCGAGCGG
CTCCGCATCGAGGTGACCGCCGTCGGGAAGGGCAAGACGCAGCTCCACCTCTGGCGCGAGCCGCTCCCGGAGCCGCTGCA
GGTCGGCCCCGAGACCCCGACCGCCACGCCGGCCGACGGCCTCACGCAGCGCGAGCGGGAGGTGGCGCTGCTCGTGGCCG
ACGGGCTCCGCTCCCGCGAGGTGGCCGAGCGGCTGGGGATCGCCTCCCAGACCGTGAAGAGCCACCTCAAGACCATCTTC
GACAAGCTCGGCGTGCGGAACCGCGTCGAGCTCGCGCGGAGGCTGGTGCAGCACTAG

Upstream 100 bases:

>100_bases
CCGGAACCCCGAAGGAGATCGCGACGGCTCGCGATGCGAGTGACCACTCGTTCGCAGGGCTGTAGTATGTGGGTCCTGTC
TCCACACGGAGGCAAAGGGG

Downstream 100 bases:

>100_bases
CGGCGAGCGGCCCCGGGCCGCTCGCGCCTGGCCTCTCCGGCGGCGTCCGGCGCCGCCGCGACGCCCGTTCCTCGTCCGGT
CCTCGCGCGCGTGCGGCGCT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLAMMRANVRVPAPRGAAAHSDAGGLLRADRQAEEMLKVFFADAADGALVPAELRGLTDGAQNGPPGVRRTLVMEGHGER
LRIEVTAVGKGKTQLHLWREPLPEPLQVGPETPTATPADGLTQREREVALLVADGLRSREVAERLGIASQTVKSHLKTIF
DKLGVRNRVELARRLVQH

Sequences:

>Translated_178_residues
MLAMMRANVRVPAPRGAAAHSDAGGLLRADRQAEEMLKVFFADAADGALVPAELRGLTDGAQNGPPGVRRTLVMEGHGER
LRIEVTAVGKGKTQLHLWREPLPEPLQVGPETPTATPADGLTQREREVALLVADGLRSREVAERLGIASQTVKSHLKTIF
DKLGVRNRVELARRLVQH
>Mature_178_residues
MLAMMRANVRVPAPRGAAAHSDAGGLLRADRQAEEMLKVFFADAADGALVPAELRGLTDGAQNGPPGVRRTLVMEGHGER
LRIEVTAVGKGKTQLHLWREPLPEPLQVGPETPTATPADGLTQREREVALLVADGLRSREVAERLGIASQTVKSHLKTIF
DKLGVRNRVELARRLVQH

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19296; Mature: 19296

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMMRANVRVPAPRGAAAHSDAGGLLRADRQAEEMLKVFFADAADGALVPAELRGLTDG
CCCEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC
AQNGPPGVRRTLVMEGHGERLRIEVTAVGKGKTQLHLWREPLPEPLQVGPETPTATPADG
CCCCCCCHHEEEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCCCCC
LTQREREVALLVADGLRSREVAERLGIASQTVKSHLKTIFDKLGVRNRVELARRLVQH
CHHHHHHEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLAMMRANVRVPAPRGAAAHSDAGGLLRADRQAEEMLKVFFADAADGALVPAELRGLTDG
CCCEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC
AQNGPPGVRRTLVMEGHGERLRIEVTAVGKGKTQLHLWREPLPEPLQVGPETPTATPADG
CCCCCCCHHEEEEEECCCCEEEEEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCCCCC
LTQREREVALLVADGLRSREVAERLGIASQTVKSHLKTIFDKLGVRNRVELARRLVQH
CHHHHHHEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA