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The map label for this gene is ybhS [H]

Identifier: 220918404

GI number: 220918404

Start: 3683866

End: 3685008

Strand: Direct

Name: ybhS [H]

Synonym: A2cp1_3308

Alternate gene names: 220918404

Gene position: 3683866-3685008 (Clockwise)

Preceding gene: 220918403

Following gene: 220918405

Centisome position: 73.25

GC content: 72.35

Gene sequence:

>1143_bases
GTGACGGGGCCCCGGGAGCGGACGCGCCGCTCGCTGGTGCGCATCGGCGCCATGGCGCAGAAGGAGACCATCCATGTCCT
GCGCGACCCGCGCACGCTGTACCTCGCGCTGGTCATGCCGCTGGTGATGCTGTTCCTGTTCGGCTACGGCGTGACCACCG
ACCTGGAGCGGATCCCGCTGGCGGTGGCGGACGCGGACCGGAGCGAGGCGTCGCGCGAGCTGGTCCGGGCGCTCACCGAG
AGCGGCGAGCTGGCGCTGGCGGGCGAGGTCGCGCCCCGGGACGCGGACCGGCTGTTCCGCCGGGGCGAGGCGGCGGCGGT
GCTGGTGATCCCGGAGGACTACGAGGAGCGGCTGGCCCGCCGCGAGACGGTGGAGCTGCAGCTCCTGGCCGACGCGTCCG
ACGTCAGCTCGGCGAACCAGCTCCTCTCCAAGGCCGACGCGCTGGTGCGCGCCGAGTCGCGCCGGCGCTCCGCCGCCCTC
GCGGCGCCGGCCGCGCCGCCGCTCTCGGTGAAGGTCCGGACGCTCTACAACCCCGCCGCGCGATCGGCGCTGTTCCTGGT
GCCGGGGCTCGCCGCGTACATCCTGGCGATCACCGCGATCCTGCTCACCACGCTCACCGTGGCCGGCGAGTGGGAGCGCG
GCTCGATGGAGCAGCTCTTCGCCTCGCCGGTGGGCCGGCTGGAGATCGTGCTCGGCAAGCTCCTGCCCTACCTCGTGCTG
GCGATGCTCGAGCTGCTGGTGGTGATCGCGTTCGGGGCGGCGGTGTTCGACGTGCCGGTGATGGGCAAGCCGCCGCTCCT
CATCGCCATGGGGTTCTTCTTCGTGGTGGGGATGCTCGGCCAGGGGCTGCTCGTGTCGGTCCTCACCAAGAACCAGCTCC
TCGCCACGCAGGTGGGGCTCATCTCCGCCCTGCTGCCGTCCCTGCTCCTCTCCGGCATGGTGTTCCCCATCGAGAACATG
CCCGTGGCGCTGCAGCTCCTCTCCCGCCTGATCCCGGCCCGCTACATGGTGCACGCGCTCCGCGAGATCCTGCTGAAGGG
GAACGGCCTCGACGTGCTCTGGCCCGACCTGCTCGCGGTGGTGGCGTTCGCGCTCCTCGTGATCGCGCTCTCCACCGCGC
GCTTCAAGCGGAGGCTCGCGTGA

Upstream 100 bases:

>100_bases
GGGGCGCCTCGGACGTGGTGGTCGAGCGCGCCGAGCCGAGCCTCGAGGACGTGTTCCTGGCGGTGGTCGGCGCCGGCGGG
CGCGGCGAGGAGGGCTCGCC

Downstream 100 bases:

>100_bases
CCCCCCGACGCCCCAGGCCCTCGGCGCGCGTGCAGTTCCTGGCGGTGTTCCGCAAGGAGGTCCGCCAGACGGCGCGCGAC
AAGCGCATGATGGCGGTGCT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTGPRERTRRSLVRIGAMAQKETIHVLRDPRTLYLALVMPLVMLFLFGYGVTTDLERIPLAVADADRSEASRELVRALTE
SGELALAGEVAPRDADRLFRRGEAAAVLVIPEDYEERLARRETVELQLLADASDVSSANQLLSKADALVRAESRRRSAAL
AAPAAPPLSVKVRTLYNPAARSALFLVPGLAAYILAITAILLTTLTVAGEWERGSMEQLFASPVGRLEIVLGKLLPYLVL
AMLELLVVIAFGAAVFDVPVMGKPPLLIAMGFFFVVGMLGQGLLVSVLTKNQLLATQVGLISALLPSLLLSGMVFPIENM
PVALQLLSRLIPARYMVHALREILLKGNGLDVLWPDLLAVVAFALLVIALSTARFKRRLA

Sequences:

>Translated_380_residues
MTGPRERTRRSLVRIGAMAQKETIHVLRDPRTLYLALVMPLVMLFLFGYGVTTDLERIPLAVADADRSEASRELVRALTE
SGELALAGEVAPRDADRLFRRGEAAAVLVIPEDYEERLARRETVELQLLADASDVSSANQLLSKADALVRAESRRRSAAL
AAPAAPPLSVKVRTLYNPAARSALFLVPGLAAYILAITAILLTTLTVAGEWERGSMEQLFASPVGRLEIVLGKLLPYLVL
AMLELLVVIAFGAAVFDVPVMGKPPLLIAMGFFFVVGMLGQGLLVSVLTKNQLLATQVGLISALLPSLLLSGMVFPIENM
PVALQLLSRLIPARYMVHALREILLKGNGLDVLWPDLLAVVAFALLVIALSTARFKRRLA
>Mature_379_residues
TGPRERTRRSLVRIGAMAQKETIHVLRDPRTLYLALVMPLVMLFLFGYGVTTDLERIPLAVADADRSEASRELVRALTES
GELALAGEVAPRDADRLFRRGEAAAVLVIPEDYEERLARRETVELQLLADASDVSSANQLLSKADALVRAESRRRSAALA
APAAPPLSVKVRTLYNPAARSALFLVPGLAAYILAITAILLTTLTVAGEWERGSMEQLFASPVGRLEIVLGKLLPYLVLA
MLELLVVIAFGAAVFDVPVMGKPPLLIAMGFFFVVGMLGQGLLVSVLTKNQLLATQVGLISALLPSLLLSGMVFPIENMP
VALQLLSRLIPARYMVHALREILLKGNGLDVLWPDLLAVVAFALLVIALSTARFKRRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=370, Percent_Identity=34.0540540540541, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI1787010, Length=372, Percent_Identity=29.3010752688172, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI48994943, Length=371, Percent_Identity=26.9541778975741, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI226510979, Length=344, Percent_Identity=25.2906976744186, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24650855, Length=369, Percent_Identity=22.7642276422764, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24650853, Length=369, Percent_Identity=22.7642276422764, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI85725260, Length=407, Percent_Identity=20.6388206388206, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI85725262, Length=407, Percent_Identity=20.6388206388206, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41185; Mature: 41053

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPRERTRRSLVRIGAMAQKETIHVLRDPRTLYLALVMPLVMLFLFGYGVTTDLERIPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCE
AVADADRSEASRELVRALTESGELALAGEVAPRDADRLFRRGEAAAVLVIPEDYEERLAR
EEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHH
RETVELQLLADASDVSSANQLLSKADALVRAESRRRSAALAAPAAPPLSVKVRTLYNPAA
HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHH
RSALFLVPGLAAYILAITAILLTTLTVAGEWERGSMEQLFASPVGRLEIVLGKLLPYLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH
AMLELLVVIAFGAAVFDVPVMGKPPLLIAMGFFFVVGMLGQGLLVSVLTKNQLLATQVGL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ISALLPSLLLSGMVFPIENMPVALQLLSRLIPARYMVHALREILLKGNGLDVLWPDLLAV
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH
VAFALLVIALSTARFKRRLA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGPRERTRRSLVRIGAMAQKETIHVLRDPRTLYLALVMPLVMLFLFGYGVTTDLERIPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCE
AVADADRSEASRELVRALTESGELALAGEVAPRDADRLFRRGEAAAVLVIPEDYEERLAR
EEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHH
RETVELQLLADASDVSSANQLLSKADALVRAESRRRSAALAAPAAPPLSVKVRTLYNPAA
HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHH
RSALFLVPGLAAYILAITAILLTTLTVAGEWERGSMEQLFASPVGRLEIVLGKLLPYLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH
AMLELLVVIAFGAAVFDVPVMGKPPLLIAMGFFFVVGMLGQGLLVSVLTKNQLLATQVGL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ISALLPSLLLSGMVFPIENMPVALQLLSRLIPARYMVHALREILLKGNGLDVLWPDLLAV
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH
VAFALLVIALSTARFKRRLA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]