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The map label for this gene is 220918180

Identifier: 220918180

GI number: 220918180

Start: 3405684

End: 3406358

Strand: Reverse

Name: 220918180

Synonym: A2cp1_3083

Alternate gene names: NA

Gene position: 3406358-3405684 (Counterclockwise)

Preceding gene: 220918181

Following gene: 220918179

Centisome position: 67.73

GC content: 71.26

Gene sequence:

>675_bases
ATGCAGCGACTCCTCCTCGCGGTGGACCGGCTCTCCACCGCCGTCGGCCAGGCGTTCGCCTGGCTCATCGTGGCGATCAC
CGGGCTCGTGACGTGGGAGGTCTTCTCGCGGAAGTTCCTCGACGCCCCGCACGCCTGGGCCTTCGACGCGCAGATCATGA
TGTACGGCGTCCTGTTCATGATGGCGGGCGCCTACACCCTCGCGAAGAGCGGCCACGTGCGGGGCGACGTGCTCTACGGC
TTCTTCCCGCCGCGCGTGCAGGCCGGGCTCGACCTCGTCCTGTACGTCGCGTTCTTCGTCCCGGGCGTGCTGGCGATGGT
GTACGCCGGGTGGACGTACGCCGCGGAGTCGTTCGCGATCCGAGAGCACTCCACCATCACGGTGGACGGGCCGCCCATCT
ATCCGTTCAAGGCGGCCATCCCGCTCGCGGGCGGGCTCCTCCTGCTGCAGGGTGCGGTCGAGATCGTCCGCTGCCTCGCC
TGCCTCCGGGCCGGCGAGTGGCCGTCGCGCACCCAGGACGTGGAGGAGGTGGACGTCGACAAGCTGAAGGAGCTCGTCCA
CGTCAAGGACGAGGACCTCGCCGCCCTCGACGCGCTGGTGGTCCGGCGCGAGGGCGGCGCCGCGGGGCCGGGCGACGAGC
CGCCCGAGGCGGGTCGGAAGGACACGCGGCCATGA

Upstream 100 bases:

>100_bases
GCAGCGGGCGGCGCGCTGGCAGAACGACACGAACGTGGACTTCAAGATGGCCTACAACCACTTCTTCGGCGGGAAGAAGA
AGGCCACGTAGGAGCGCCGC

Downstream 100 bases:

>100_bases
GGAAGGAGCTCTGGTTCGGCCTCGGCATGATGGCGGTGATCGTCGCGATCACCGCGTGGATCATGCCCGCCCCGGCGCAG
ATGACCGGCGGCCACCTCGG

Product: Tripartite ATP-independent periplasmic transporter DctQ component

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter Small Transmembrane Protein; Transporter DctQ Related Transmembrane Protein; TRAP Mannitol/C4-Dicarboxylate Transporter; Small Integral Membrane Tranport Protein; TRAP Dicarboxylate Transporter Subunit DctQ; TRAP-Type Transporter Small Permease Component; Trap-Type Transport System Small Permease Component; Tripartite Transporter Small Subunit; Transporter DctQ-Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; TRAP Dicarboxylate Transporter DctM Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP Transporter DctQ-Like Membrane Protein; Tripartite ATP-Independent Periplasmic

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MQRLLLAVDRLSTAVGQAFAWLIVAITGLVTWEVFSRKFLDAPHAWAFDAQIMMYGVLFMMAGAYTLAKSGHVRGDVLYG
FFPPRVQAGLDLVLYVAFFVPGVLAMVYAGWTYAAESFAIREHSTITVDGPPIYPFKAAIPLAGGLLLLQGAVEIVRCLA
CLRAGEWPSRTQDVEEVDVDKLKELVHVKDEDLAALDALVVRREGGAAGPGDEPPEAGRKDTRP

Sequences:

>Translated_224_residues
MQRLLLAVDRLSTAVGQAFAWLIVAITGLVTWEVFSRKFLDAPHAWAFDAQIMMYGVLFMMAGAYTLAKSGHVRGDVLYG
FFPPRVQAGLDLVLYVAFFVPGVLAMVYAGWTYAAESFAIREHSTITVDGPPIYPFKAAIPLAGGLLLLQGAVEIVRCLA
CLRAGEWPSRTQDVEEVDVDKLKELVHVKDEDLAALDALVVRREGGAAGPGDEPPEAGRKDTRP
>Mature_224_residues
MQRLLLAVDRLSTAVGQAFAWLIVAITGLVTWEVFSRKFLDAPHAWAFDAQIMMYGVLFMMAGAYTLAKSGHVRGDVLYG
FFPPRVQAGLDLVLYVAFFVPGVLAMVYAGWTYAAESFAIREHSTITVDGPPIYPFKAAIPLAGGLLLLQGAVEIVRCLA
CLRAGEWPSRTQDVEEVDVDKLKELVHVKDEDLAALDALVVRREGGAAGPGDEPPEAGRKDTRP

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24376; Mature: 24376

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLLLAVDRLSTAVGQAFAWLIVAITGLVTWEVFSRKFLDAPHAWAFDAQIMMYGVLFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MAGAYTLAKSGHVRGDVLYGFFPPRVQAGLDLVLYVAFFVPGVLAMVYAGWTYAAESFAI
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
REHSTITVDGPPIYPFKAAIPLAGGLLLLQGAVEIVRCLACLRAGEWPSRTQDVEEVDVD
ECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHH
KLKELVHVKDEDLAALDALVVRREGGAAGPGDEPPEAGRKDTRP
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRLLLAVDRLSTAVGQAFAWLIVAITGLVTWEVFSRKFLDAPHAWAFDAQIMMYGVLFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MAGAYTLAKSGHVRGDVLYGFFPPRVQAGLDLVLYVAFFVPGVLAMVYAGWTYAAESFAI
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
REHSTITVDGPPIYPFKAAIPLAGGLLLLQGAVEIVRCLACLRAGEWPSRTQDVEEVDVD
ECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHH
KLKELVHVKDEDLAALDALVVRREGGAAGPGDEPPEAGRKDTRP
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA