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The map label for this gene is 220918163

Identifier: 220918163

GI number: 220918163

Start: 3392086

End: 3392775

Strand: Reverse

Name: 220918163

Synonym: A2cp1_3066

Alternate gene names: NA

Gene position: 3392775-3392086 (Counterclockwise)

Preceding gene: 220918170

Following gene: 220918162

Centisome position: 67.46

GC content: 70.58

Gene sequence:

>690_bases
ATGCGAGCGAAGCCGGCGCGAGACGACAGGCAGGGGGAGGCGGACGAGCCAGCGCTCCGCCGGCGAATCCTCGAGGCAGC
CTTCACTGCGTTCGCCGAGCTCGGCTACTCCGGGACGAGCACGAGCGAGATCGCGACGCGCGCGCACGTGTCGAAGCGGG
ACCTCTACACGCACGTGGGCAACAAGCTCCAGCTGCTCATCGAGTGCATCCGCGATCGGTCGGCGCGATTCCCGGTTGCC
GCCGAGCTTCCCGACTCGGCGGACCGGGAGATGCTCCAGGCCGCGCTCACGAGATTCGGCCAGCGGTTCCTCGCGGAGGT
GACGGACGCGAACGTCGTCGAGACGTTCCGGCTGGCCATCGCCGAGGCGAACCGCGCACCCGAGATCGCCCGGGCCCTCG
AGGAGCTCGGGCGAGAGAAGGTTCGCTCCGCCCTCCGCGGCGCGCTCACGAAGGCGCGTGACAGCGCACTCGTCGAGGGC
GAGCCCGAGGAGATGATCCGGGAGTTCCTCGCGCTCCTCTGGGCAGACCTCGCCATCAGCTTGCTCCTCCGGACCGTGAA
GACGCCCGGCGAACGCGAGATCGCGAGGCGCAGCGCCGCCGCCGCGAGGGCGCTGCTCGCCCTCCATCCGAGCCCGGTCG
GCGGGCGCGCGCGTCGAAAAGGACGACATGCGAAGAATGAAGCCTCCTAG

Upstream 100 bases:

>100_bases
AACGTCAAGGGCGGCGCGGGTCCCGGTTGTGGTACCAGGTGGTACCGCTCGCCGCGGAGGGATGATGGTACGCTTCGGTA
CCGCCCGAGGAGCGGCCCGC

Downstream 100 bases:

>100_bases
AGCGGGTTCGACCTCGCCCGGGTCGAAGGACAGCGATCCGGTCCTCGAGCTGCGAAGCGCGGCGGCATGGGATGCATGGC
TCCGGGCAAACCACGATCGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRAKPARDDRQGEADEPALRRRILEAAFTAFAELGYSGTSTSEIATRAHVSKRDLYTHVGNKLQLLIECIRDRSARFPVA
AELPDSADREMLQAALTRFGQRFLAEVTDANVVETFRLAIAEANRAPEIARALEELGREKVRSALRGALTKARDSALVEG
EPEEMIREFLALLWADLAISLLLRTVKTPGEREIARRSAAAARALLALHPSPVGGRARRKGRHAKNEAS

Sequences:

>Translated_229_residues
MRAKPARDDRQGEADEPALRRRILEAAFTAFAELGYSGTSTSEIATRAHVSKRDLYTHVGNKLQLLIECIRDRSARFPVA
AELPDSADREMLQAALTRFGQRFLAEVTDANVVETFRLAIAEANRAPEIARALEELGREKVRSALRGALTKARDSALVEG
EPEEMIREFLALLWADLAISLLLRTVKTPGEREIARRSAAAARALLALHPSPVGGRARRKGRHAKNEAS
>Mature_229_residues
MRAKPARDDRQGEADEPALRRRILEAAFTAFAELGYSGTSTSEIATRAHVSKRDLYTHVGNKLQLLIECIRDRSARFPVA
AELPDSADREMLQAALTRFGQRFLAEVTDANVVETFRLAIAEANRAPEIARALEELGREKVRSALRGALTKARDSALVEG
EPEEMIREFLALLWADLAISLLLRTVKTPGEREIARRSAAAARALLALHPSPVGGRARRKGRHAKNEAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25258; Mature: 25258

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAKPARDDRQGEADEPALRRRILEAAFTAFAELGYSGTSTSEIATRAHVSKRDLYTHVG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
NKLQLLIECIRDRSARFPVAAELPDSADREMLQAALTRFGQRFLAEVTDANVVETFRLAI
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AEANRAPEIARALEELGREKVRSALRGALTKARDSALVEGEPEEMIREFLALLWADLAIS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LLLRTVKTPGEREIARRSAAAARALLALHPSPVGGRARRKGRHAKNEAS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRAKPARDDRQGEADEPALRRRILEAAFTAFAELGYSGTSTSEIATRAHVSKRDLYTHVG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
NKLQLLIECIRDRSARFPVAAELPDSADREMLQAALTRFGQRFLAEVTDANVVETFRLAI
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AEANRAPEIARALEELGREKVRSALRGALTKARDSALVEGEPEEMIREFLALLWADLAIS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LLLRTVKTPGEREIARRSAAAARALLALHPSPVGGRARRKGRHAKNEAS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA