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The map label for this gene is ybjK [C]

Identifier: 220918170

GI number: 220918170

Start: 3396485

End: 3397111

Strand: Reverse

Name: ybjK [C]

Synonym: A2cp1_3073

Alternate gene names: 220918170

Gene position: 3397111-3396485 (Counterclockwise)

Preceding gene: 220918173

Following gene: 220918163

Centisome position: 67.55

GC content: 74.96

Gene sequence:

>627_bases
ATGAGCTCGGCCGACAGGAAGAAGGCCCGCGCGCCCCGCGCCCCGAAGGACGCCGCCACGGCGGACCGGTCCGACCGGCG
CGTCGTGATCCTGGAGGCGGTGCTGGAGCTGCTCGCGACGCGGGGGCTCGAGGGCGTGACCCACCGCGCGGCGGACGACG
CCGCCGGGCTGCCCCAGGGCTCGACGACCTACTACTTCCCGAAGAAGAGCGCGCTGCTCGTCGCGGCCGCCGACCACCTC
GCCGCCCTGCTGGAGAAGGAGTGCGACGAGCTGCAGGTCGGGTTCGCCGAGCGCGCCGCTCGGCAGGGCCTGGACGCCGC
CATCGCCTACGTGGCCGACGAGCTCGCGGCGTACGCCGACGACACGCGCCACCTGTTCCTGGCCCGCGTCGAGCTGACCA
TGGCCGCGGCGCGGCGCGAGGACCTGGCCGGCGTCGGCGAGCGCCTCACCGCCGCGGCGCGCCGGCCCATCGCGTTCTTC
GTGAAGCTCATCTCGCACGGGCGCGCCGACGCGCCCATCGAGACGTGCGCCGGCCTCATCGACGGCATCACGCTCATGTA
CGCCATCGGCCAGGGGCCGAGGCCCACGACCGAGCAGGTCTCGGCCGTGCTTCGCGCCGTGCTGTGA

Upstream 100 bases:

>100_bases
AGAGTAGTGGAAGTCGCTGCGGAGCAGTCAGGCGGACTCTACATACGTAGAGGATCACCACGTGTCAACGCGTCCCGGCG
ATCGAACCCGAGGGAGGGCC

Downstream 100 bases:

>100_bases
GCGCCCGGACCTCGGGCTCAGCGCGCCGCCACGGACAGGTGCCGCACTTTGTCTGGATTGCGCACCACGCAGCGCTCGAG
CGGTGACAGCCGGTCCAGGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSSADRKKARAPRAPKDAATADRSDRRVVILEAVLELLATRGLEGVTHRAADDAAGLPQGSTTYYFPKKSALLVAAADHL
AALLEKECDELQVGFAERAARQGLDAAIAYVADELAAYADDTRHLFLARVELTMAAARREDLAGVGERLTAAARRPIAFF
VKLISHGRADAPIETCAGLIDGITLMYAIGQGPRPTTEQVSAVLRAVL

Sequences:

>Translated_208_residues
MSSADRKKARAPRAPKDAATADRSDRRVVILEAVLELLATRGLEGVTHRAADDAAGLPQGSTTYYFPKKSALLVAAADHL
AALLEKECDELQVGFAERAARQGLDAAIAYVADELAAYADDTRHLFLARVELTMAAARREDLAGVGERLTAAARRPIAFF
VKLISHGRADAPIETCAGLIDGITLMYAIGQGPRPTTEQVSAVLRAVL
>Mature_207_residues
SSADRKKARAPRAPKDAATADRSDRRVVILEAVLELLATRGLEGVTHRAADDAAGLPQGSTTYYFPKKSALLVAAADHLA
ALLEKECDELQVGFAERAARQGLDAAIAYVADELAAYADDTRHLFLARVELTMAAARREDLAGVGERLTAAARRPIAFFV
KLISHGRADAPIETCAGLIDGITLMYAIGQGPRPTTEQVSAVLRAVL

Specific function: Unknown

COG id: COG3226

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22164; Mature: 22032

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSADRKKARAPRAPKDAATADRSDRRVVILEAVLELLATRGLEGVTHRAADDAAGLPQG
CCCCCHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
STTYYFPKKSALLVAAADHLAALLEKECDELQVGFAERAARQGLDAAIAYVADELAAYAD
CCEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DTRHLFLARVELTMAAARREDLAGVGERLTAAARRPIAFFVKLISHGRADAPIETCAGLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DGITLMYAIGQGPRPTTEQVSAVLRAVL
HHHHHHHHHCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
SSADRKKARAPRAPKDAATADRSDRRVVILEAVLELLATRGLEGVTHRAADDAAGLPQG
CCCCHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
STTYYFPKKSALLVAAADHLAALLEKECDELQVGFAERAARQGLDAAIAYVADELAAYAD
CCEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DTRHLFLARVELTMAAARREDLAGVGERLTAAARRPIAFFVKLISHGRADAPIETCAGLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DGITLMYAIGQGPRPTTEQVSAVLRAVL
HHHHHHHHHCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA